S. Sen

发表

Gene Expression Signatures of Coronary Heart Disease

Andrew D. Johnson, D. Levy, P. Munson, 2013, Arteriosclerosis, thrombosis, and vascular biology.

Laboratory mice born to wild mice have natural microbiota and model human immune responses

J. Badger, M. Hafner, J. McCulloch, 2019, Science.

Massively parallel sequencing, aCGH, and RNA-Seq technologies provide a comprehensive molecular diagnosis of Fanconi anemia.

E. Ostrander, S. Sen, J. Teer, 2013, Blood.

Hidden components of microbiome diversity revealed by cell wall lysis with Adaptive Focused Acoustics

S. Sen, H. Khoja, Giselle F. Wallace, 2020, bioRxiv.

Mobile elements create structural variation: analysis of a complete human genome.

E. Kirkness, S. Levy, M. Batzer, 2009, Genome research.

Human genomic deletions mediated by recombination between Alu elements.

Matthew D. Dyer, Richard Cordaux, M. Batzer, 2006, American journal of human genetics.

Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

Marc Salit, Daniel Samarov, Jennifer McDaniel, 2012, PloS one.

Genotype-driven identification of a molecular network predictive of advanced coronary calcium in ClinSeq® and Framingham Heart Study cohorts

Adam R. Davis, C. O’Donnell, S. Sen, 2017, BMC Systems Biology.

Machine learning identifies SNPs predictive of advanced coronary artery calcium in ClinSeq® and Framingham Heart Study cohorts

Adam R. Davis, C. O’Donnell, S. Sen, 2017, bioRxiv.

Computational methods for the analysis of primate mobile elements.

Miriam K. Konkel, M. Batzer, S. Sen, 2010, Methods in molecular biology.

Diversifying the genomic data science research community

Tx, Statistics, Biochemistry, 2022, Genome research.

Internal priming: an opportunistic pathway for L1 and Alu retrotransposition in hominins.

M. Batzer, S. Sen, Deepa Srikanta, 2009, Gene.

NAA10 polyadenylation signal variants cause syndromic microphthalmia

Jeffrey N. Dudley, R. Holt, A. Schäffer, 2019, Journal of Medical Genetics.

Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines

Larry N. Singh, J. Mullikin, E. Green, 2014, BMC Genomics.

Gut microbiome–mediated bile acid metabolism regulates liver cancer via NKT cells

Casey M. Theriot, Bernd Heinrich, Xin Wei Wang, 2018, Science.

Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair

Jesse H. Arbuckle, Jonathan L. Linehan, Allyson L. Byrd, 2018, Cell.

Commensal-specific T cell plasticity promotes rapid tissue adaptation to injury

Jonathan L. Linehan, Allyson L. Byrd, Y. Belkaid, 2019, Science.

An alternative pathway for Alu retrotransposition suggests a role in DNA double-strand break repair.

M. Batzer, S. Sen, Deepa Srikanta, 2009, Genomics.

Retrotransposon-mediated instability in the human genome

S. Sen, 2008 .

Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages

M. Batzer, S. Sen, Kyudong Han, 2005, Nucleic acids research.

Endonuclease-independent insertion provides an alternative pathway for L1 retrotransposition in the human genome

M. Batzer, S. Sen, Kyudong Han, 2007, Nucleic acids research.

human genome Mobile elements create structural variation : Analysis of a complete Material Supplemental

E. Kirkness, S. Levy, M. Batzer, 2009 .

Conventional Co-Housing Modulates Murine Gut Microbiota and Hematopoietic Gene Expression

G. Trinchieri, S. Sen, Xingmin Feng, 2020, International journal of molecular sciences.

RNA-sequencing of the brain transcriptome implicates dysregulation of neuroplasticity, circadian rhythms and GTPase binding in bipolar disorder

F. McMahon, J. Kleinman, P. Munson, 2014, Molecular Psychiatry.

Alu Recombination-Mediated Structural Deletions in the Chimpanzee Genome

M. Batzer, S. Sen, Kyudong Han, 2007, PLoS genetics.

Repair-Mediated Duplication by Capture of Proximal Chromosomal DNA Has Shaped Vertebrate Genome Evolution

M. Batzer, S. Sen, C. Feschotte, 2009, PLoS genetics.

TREML4 Promotes Inflammatory Programs in Human and Murine Macrophages and Alters Atherosclerosis Lesion Composition in the Apolipoprotein E Deficient Mouse

A. Finn, F. Kolodgie, L. Biesecker, 2020, Frontiers in Immunology.

Integrative DNA, RNA, and protein evidence connects TREML4 to coronary artery calcification.

Larry N. Singh, Andrew D. Johnson, J. Mullikin, 2014, American journal of human genetics.

Attenuation of immune‐mediated bone marrow damage in conventionally housed mice

G. Trinchieri, S. Sen, Xingmin Feng, 2020, Molecular carcinogenesis.

Analysis of Ly49 gene transcripts in mature NK cells supports a role for the Pro1 element in gene activation, not gene expression

S. Sen, S. Anderson, Maggie Cam, 2016, Genes and Immunity.

Pendrin localizes to the adrenal medulla and modulates catecholamine release.

S. Sen, A. Osunkoya, P. Plotsky, 2015, American journal of physiology. Endocrinology and metabolism.

Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines

Larry N. Singh, J. Mullikin, E. Green, 2014, BMC Genomics.

Identification of candidate genes involved in coronary artery calcification by transcriptome sequencing of cell lines

Larry N. Singh, J. Mullikin, E. Green, 2014, BMC Genomics.

Non-classical Immunity Controls Microbiota Impact on Skin Immunity and Tissue Repair

Jesse H. Arbuckle, Jonathan L. Linehan, Allyson L. Byrd, 2018, Cell.

Massively parallel sequencing, aCGH, and RNA-Seq technologies provide a comprehensive molecular diagnosis of Fanconi anemia.

E. Ostrander, S. Sen, J. Teer, 2013, Blood.