M. Mikuła

发表

Human arm weight compensation in rehabilitation robotics: efficacy of three distinct methods

Debra L. Fulton, Magdalena I. Swanson, Jonathan S. Lim, 2020, Journal of NeuroEngineering and Rehabilitation.

Debra L. Fulton, Magdalena I. Swanson, Jonathan S. Lim, 2012 .

Debra L. Fulton, Henriette O'Geen, Elodie Portales-Casamar, 2012, Genome Biology.

Whole‐exome sequencing identifies novel pathogenic variants across the ATP7B gene and some modifiers of Wilson's disease phenotype

M. Mikuła, J. Ostrowski, A. Paziewska, 2018, Liver international : official journal of the International Association for the Study of the Liver.

Clinical Applicability of Whole-Exome Sequencing Exemplified by a Study in Young Adults with the Advanced Cryptogenic Cholestatic Liver Diseases

M. Mikuła, J. Ostrowski, A. Paziewska, 2017, Gastroenterology research and practice.

A heterozygous mutation in GOT1 is associated with familial macro-aspartate aminotransferase.

K. Ginalski, M. Mikuła, J. Ostrowski, 2017, Journal of hepatology.

Extracellular matrix and cytochrome P450 gene expression can distinguish steatohepatitis from steatosis in mice

Joanna K. Ledwon, Joanna K Ledwon, M. Mikuła, 2014, Journal of cellular and molecular medicine.

Integrative genomics reveal a role for MCPIP1 in adipogenesis and adipocyte metabolism

M. Mikuła, S. Kędracka-Krok, A. Paziewska, 2019, Cellular and Molecular Life Sciences.

Mass Spectrometry-Based Comprehensive Analysis of Pancreatic Cyst Fluids

M. Mikuła, J. Ostrowski, M. Dadlez, 2018, BioMed research international.

The role of the SHH gene in prostate cancer cell resistance to paclitaxel

M. Mikuła, M. Małecki, A. Lipiec, 2014, The Prostate.

Mutation Profiling of Premalignant Colorectal Neoplasia

M. Mikuła, J. Ostrowski, J. Pachlewski, 2019, Gastroenterology Research and Practice.

Three clinical variants of gastroesophageal reflux disease form two distinct gene expression signatures

J. Reguła, M. Mikuła, J. Ostrowski, 2006, Journal of Molecular Medicine.

Combination Testing Using a Single MSH5 Variant alongside HLA Haplotypes Improves the Sensitivity of Predicting Coeliac Disease Risk in the Polish Population

M. Mikuła, J. Ostrowski, A. Rybak, 2015, PloS one.

Expression of pendrin in benign and malignant human thyroid tissues

M. Mikuła, J. Ostrowski, B. Czarnocka, 2005, British Journal of Cancer.

Molecular defense mechanisms of Barrett’s metaplasia estimated by an integrative genomics

J. Reguła, M. Mikuła, J. Ostrowski, 2007, Journal of Molecular Medicine.

The response network of HSP70 defines vulnerabilities in cancer cells with the inhibited proteasome

Alicja, J. Wiśniewski, M. Mikuła, 2022, bioRxiv.

HSP70-driven molecular response to the proteasome machinery inhibition is a vulnerability in cancer

J. Wiśniewski, M. Mikuła, D. Walerych, 2021 .

SEL120-34A is a novel CDK8 inhibitor active in AML cells with high levels of serine phosphorylation of STAT1 and STAT5 transactivation domains

M. Mikuła, J. Ostrowski, A. Wróbel, 2017, Oncotarget.

Integrating proteomic and transcriptomic high-throughput surveys for search of new biomarkers of colon tumors

M. Mikuła, J. Ostrowski, M. Dadlez, 2011, Functional & Integrative Genomics.

Mitochondrial amidoxime-reducing component 2 (MARC2) has a significant role in N-reductive activity and energy metabolism

M. Mikuła, J. Ostrowski, M. Kulecka, 2019, The Journal of Biological Chemistry.

Increased mitochondrial gene expression during L6 cell myogenesis is accelerated by insulin.

M. Mikuła, J. Ostrowski, E. Hennig, 2005, The international journal of biochemistry & cell biology.

The diverse involvement of heterogeneous nuclear ribonucleoprotein K in mitochondrial response to insulin

M. Mikuła, J. Ostrowski, A. Dzwonek, 2006, FEBS letters.

Tip-α (hp0596 Gene Product) Is a Highly Immunogenic Helicobacter pylori Protein Involved in Colonization of Mouse Gastric Mucosa

M. Mikuła, J. Ostrowski, E. K. Jagusztyn-Krynicka, 2008, Current Microbiology.

Heterogeneous Nuclear Ribonucleoprotein K Enhances Insulin-induced Expression of Mitochondrial UCP2 Protein*

M. Mikuła, J. Ostrowski, L. Wyrwicz, 2004, Journal of Biological Chemistry.

Quantitative detection for low levels of Helicobacter pylori infection in experimentally infected mice by real-time PCR.

M. Mikuła, J. Ostrowski, A. Dzwonek, 2003, Journal of microbiological methods.

Functional analyses of a low-penetrance risk variant rs6702619/1p21.2 associating with colorectal cancer in Polish population.

M. Mikuła, J. Ostrowski, M. Kulecka, 2019, Acta biochimica Polonica.

Large intra- and inter-individual variability of genes expression levels limits potential predictive value of molecular diagnosis of dysplasia in Barrett’s esophagus

J. Reguła, M. Mikuła, J. Ostrowski, 2008, Journal of Molecular Medicine.

Prolonged transfer of feces from the lean mice modulates gut microbiota in obese mice

M. Mikuła, J. Ostrowski, A. Paziewska, 2016, Nutrition & Metabolism.

Protective effect of vaccination with DNA of the H. Pylori genomic library in experimentally infected mice.

M. Mikuła, J. Ostrowski, E. Hennig, 2004, Cellular & molecular biology letters.

PARP Inhibition Increases the Reliance on ATR/CHK1 Checkpoint Signaling Leading to Synthetic Lethality—An Alternative Treatment Strategy for Epithelial Ovarian Cancer Cells Independent from HR Effectiveness

M. Mikuła, J. Ostrowski, A. Śliwińska, 2020, International journal of molecular sciences.

The Transcription Factor Encyclopedia The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters

Debra L. Fulton, Magdalena I. Swanson, Jonathan S. Lim, 2012 .

Genetic associations with lymphomas in Polish patients: A pooled‐DNA genome‐wide association analysis

M. Mikuła, J. Ostrowski, A. Paziewska, 2022, International journal of immunogenetics.

Lack of evidence for increased level of circulating urothelial cells in the peripheral blood after transurethral resection of bladder tumors

M. Mikuła, J. Ostrowski, S. Poletajew, 2011, International Urology and Nephrology.

Association between gynecomastia and aromatase (CYP19) polymorphisms.

M. Mikuła, J. Ostrowski, W. Zgliczyński, 2008, European journal of endocrinology.

Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancy

M. Skrzypczak, K. Ginalski, M. Mikuła, 2016, Nucleic acids research.

IDH1/2 Mutations Predict Shorter Survival in Chondrosarcoma

M. Mikuła, J. Ostrowski, P. Rutkowski, 2018, Journal of Cancer.

Differences between Well-Differentiated Neuroendocrine Tumors and Ductal Adenocarcinomas of the Pancreas Assessed by Multi-Omics Profiling

M. Mikuła, J. Ostrowski, B. Kos-Kudła, 2020, International journal of molecular sciences.

Correction: Modeling Oncogenic Signaling in Colon Tumors by Multidirectional Analyses of Microarray Data Directed for Maximization of Analytical Reliability

M. Skrzypczak, M. Mikuła, J. Ostrowski, 2010, PLoS ONE.

Enhanced neuro-therapeutic potential of Wharton's Jelly-derived mesenchymal stem cells in comparison with bone marrow mesenchymal stem cells culture.

A. Sarnowska, M. Mikuła, M. Zychowicz, 2016, Cytotherapy.

Helicobacter pylori protein oxidation influences the colonization process.

J. Bujnicki, M. Mikuła, J. Ostrowski, 2006, International journal of medical microbiology : IJMM.

Activity and rational combinations of a novel, engineered chimeric, TRAIL-based ligand in diffuse large B-cell lymphoma

M. Mikuła, M. Szydłowski, E. Jabłońska, 2022, Frontiers in Oncology.

Comparative kinome analysis to identify putative colon tumor biomarkers

M. Mikuła, J. Ostrowski, E. Hennig, 2011, Journal of Molecular Medicine.

The molecular network of the proteasome machinery inhibition response is orchestrated by HSP70, revealing vulnerabilities in cancer cells.

J. Wiśniewski, M. Mikuła, D. Walerych, 2022, Cell reports.

Mitochondrial-related proteomic changes during obesity and fasting in mice are greater in the liver than skeletal muscles

Joanna K Ledwon, M. Mikuła, J. Ostrowski, 2013, Functional & Integrative Genomics.

Histone H3 lysine 27 acetylation is altered in colon cancer

M. Mikuła, J. Ostrowski, M. Dadlez, 2014, Clinical Proteomics.

Modeling Oncogenic Signaling in Colon Tumors by Multidirectional Analyses of Microarray Data Directed for Maximization of Analytical Reliability

Krzysztof Goryca, Tymon Rubel, Michal Mikula, 2010, PloS one.

SYK inhibition targets acute myeloid leukemia stem cells by blocking their oxidative metabolism

M. Mikuła, M. Szydłowski, E. Jabłońska, 2020, Cell Death & Disease.

Transcription Factor Prospero Homeobox 1 (PROX1) as a Potential Angiogenic Regulator of Follicular Thyroid Cancer Dissemination

M. Mikuła, J. Ostrowski, S. Sabalińska, 2019, International journal of molecular sciences.

A preliminary evaluation of next-generation sequencing as a screening tool for targeted genotyping of erythrocyte and platelet antigens in blood donors.

M. Mikuła, J. Ostrowski, A. Kluska, 2018, Blood transfusion = Trasfusione del sangue.

Higher genome variability within metabolism genes associates with recurrent Clostridium difficile infection

M. Mikuła, J. Ostrowski, A. Paziewska, 2021, BMC microbiology.

PD-L1 Overexpression, SWI/SNF Complex Deregulation, and Profound Transcriptomic Changes Characterize Cancer-Dependent Exhaustion of Persistently Activated CD4+ T Cells

M. Mikuła, N. Rusetska, J. Siedlecki, 2021, Cancers.

A Strong Neutrophil Elastase Proteolytic Fingerprint Marks the Carcinoma Tumor Proteome*

M. Mikuła, J. Ostrowski, M. Dadlez, 2016, Molecular & Cellular Proteomics.

Discovery of indazole-pyridinone derivatives as a novel class of potent and selective MNK1/2 kinase inhibitors that protecting against endotoxin-induced septic shock.

M. Milik, M. Mikuła, J. Ostrowski, 2020, European journal of medicinal chemistry.

New recurrent BRCA1/2 mutations in Polish patients with familial breast/ovarian cancer detected by next generation sequencing

M. Mikuła, J. Ostrowski, A. Paziewska, 2015, BMC Medical Genomics.

Candidate diagnostic miRNAs that can detect cancer in prostate biopsy

M. Mikuła, J. Ostrowski, P. Rutkowski, 2018, The Prostate.

Heterogeneous Nuclear Ribonucleoprotein (HnRNP) K Genome-wide Binding Survey Reveals Its Role in Regulating 3′-End RNA Processing and Transcription Termination at the Early Growth Response 1 (EGR1) Gene through XRN2 Exonuclease*

M. Mikuła, J. Ostrowski, K. Goryca, 2013, The Journal of Biological Chemistry.

New recurrent BRCA1/2 mutations in Polish patients with familial breast/ovarian cancer detected by next generation sequencing

M. Mikuła, J. Ostrowski, A. Paziewska, 2015, BMC Medical Genomics.

DNA methylation status is more reliable than gene expression at detecting cancer in prostate biopsy

M. Mikuła, J. Ostrowski, A. Paziewska, 2014, British Journal of Cancer.

Comprehensive Analysis of the Palindromic Motif TCTCGCGAGA: A Regulatory Element of the HNRNPK Promoter

M. Mikuła, J. Ostrowski, P. Gaj, 2010, DNA research : an international journal for rapid publication of reports on genes and genomes.

The composition and richness of the gut microbiota differentiate the top Polish endurance athletes from sedentary controls

M. Mikuła, J. Ostrowski, A. Paziewska, 2020, Gut microbes.

Concurrent depletion of Vps37 proteins evokes ESCRT-I destabilization and profound cellular stress responses

M. Mikuła, K. Goryca, M. Miączyńska, 2020, Journal of Cell Science.

Effect of Saccharomyces boulardii and Mode of Delivery on the Early Development of the Gut Microbial Community in Preterm Infants

M. Mikuła, J. Ostrowski, B. Cukrowska, 2016, PloS one.

Cytotoxic Efficacy and Resistance Mechanism of a TRAIL and VEGFA-Peptide Fusion Protein in Colorectal Cancer Models

M. Mikuła, J. Ostrowski, M. Kulecka, 2021, International journal of molecular sciences.

Increased Cytoplasmic Yes-associated Protein (YAP) Expression in Mismatch Repair Protein: Proficient Colorectal Cancer With High-grade Tumor Budding and Reduced Autophagy Activity.

M. Mikuła, Hwajeong Lee, S. Najjar, 2020, Applied immunohistochemistry & molecular morphology : AIMM.

Challenges in Stratifying the Molecular Variability of Patient-Derived Colon Tumor Xenografts

M. Mikuła, J. Ostrowski, A. Paziewska, 2018, BioMed research international.

Exome scale map of genetic alterations promoting metastasis in colorectal cancer

M. Skrzypczak, K. Ginalski, M. Mikuła, 2018, BMC Genetics.

Halogenated imidazole derivatives block RNA polymerase II elongation along mitogen inducible genes

M. Mikuła, J. Ostrowski, A. Paziewska, 2010, BMC Molecular Biology.

Mutational landscape of primary and recurrent Ewing sarcoma

M. Mikuła, P. Rutkowski, A. Kluska, 2021, Contemporary oncology.

Regulation of the expression of claudin 23 by the enhancer of zeste 2 polycomb group protein in colorectal cancer.

M. Mikuła, J. Ostrowski, A. Paziewska, 2015, Molecular medicine reports.

Loss of epidermal MCPIP1 is associated with aggressive squamous cell carcinoma

M. Mikuła, G. Fontemaggi, J. Szepietowski, 2021, Journal of experimental & clinical cancer research : CR.

NrCAM, a neuronal system cell-adhesion molecule, is induced in papillary thyroid carcinomas

M. Mikuła, B. Czarnocka, K. Bardadin, 2007, British Journal of Cancer.

Noninvasive prenatal HPA‐1 typing in HPA‐1a negative pregnancies selected in the Polish PREVFNAIT screening program

M. Mikuła, J. Ostrowski, M. Dębska, 2018, Transfusion.

Limited prolonged effects of rifaximin treatment on irritable bowel syndrome-related differences in the fecal microbiome and metabolome

M. Mikuła, J. Ostrowski, P. Młynarz, 2016, Gut microbes.

Peripheral Blood Cells from Patients with Hodgkin's and Diffuse Large B Cell Lymphomas May Be a Better Source of Candidate Diagnostic miRNAs Than Circulating miRNAs

M. Mikuła, J. Ostrowski, P. Rutkowski, 2021, BioMed research international.

Signatures of circulating microRNA in four sarcoma subtypes

M. Mikuła, J. Ostrowski, P. Rutkowski, 2020, Journal of Cancer.

CryoGrid-PIXUL-RNA: high throughput RNA isolation platform for tissue transcript analysis

M. Mikuła, W. Altemeier, Andrea Lius, 2022, bioRxiv.

Direct Recruitment of ERK Cascade Components to Inducible Genes Is Regulated by Heterogeneous Nuclear Ribonucleoprotein (hnRNP) K*

M. Mikuła, K. Bomsztyk, 2011, The Journal of Biological Chemistry.

CDK8 kinase--An emerging target in targeted cancer therapy.

M. Mikuła, K. Brzózka, Tomasz Rzymski, 2015, Biochimica et biophysica acta.

Synchronous Recruitment of Epigenetic Modifiers to Endotoxin Synergistically Activated Tnf-α Gene in Acute Kidney Injury

M. Mikuła, R. Zager, Ali C. M. Johnson, 2013, PloS one.

Experimental acute lung injury induces multi-organ epigenetic modifications in key angiogenic genes implicated in sepsis-associated endothelial dysfunction

M. Mikuła, W. Altemeier, S. Gharib, 2015, Critical Care.

A novel approach to genome-wide association analysis identifies genetic associations with primary biliary cholangitis and primary sclerosing cholangitis in Polish patients

M. Mikuła, J. Ostrowski, K. Mucha, 2017, BMC Medical Genomics.

Genetic architecture differences between pediatric and adult-onset inflammatory bowel diseases in the Polish population

M. Mikuła, J. Ostrowski, A. Paziewska, 2016, Scientific Reports.

RNA sequencing reveals widespread transcriptome changes in a renal carcinoma cell line

M. Mikuła, J. Ostrowski, A. Paziewska, 2018, Oncotarget.

Ectopic overexpression of MCPIP1 impairs adipogenesis by modulating microRNAs.

M. Mikuła, A. Paziewska, M. Kulecka, 2018, Biochimica et biophysica acta. Molecular cell research.

Pyloric gland metaplasia: Potential histologic predictor of severe pouch disease including Crohn's disease of the pouch in ulcerative colitis.

M. Mikuła, Hwajeong Lee, A. Boguniewicz, 2021, Pathology, research and practice.

Lack of evidence for association of primary sclerosing cholangitis and primary biliary cirrhosis with risk alleles for Crohn's disease in Polish patients

M. Mikuła, J. Ostrowski, P. Gaj, 2008, BMC Medical Genetics.

Downregulation of PTPRH (Sap-1) in colorectal tumors.

M. Mikuła, J. Ostrowski, P. Kober, 2017, International journal of oncology.

Mutational Mosaics of Cell-Free DNA from Pancreatic Cyst Fluids

M. Mikuła, J. Ostrowski, M. Pólkowski, 2020, Digestive Diseases and Sciences.

Inhibition of PIM Kinases in DLBCL Targets MYC Transcriptional Program and Augments the Efficacy of Anti-CD20 Antibodies

M. Mikuła, D. Nowis, J. Gołąb, 2021, Cancer Research.

Additional file 7

Debra L. Fulton, Wyeth W. Wasserman, Philip Bradley, 2012 .

Impaired iron recycling from erythrocytes is an early hallmark of aging

M. Mikuła, M. Cybulska, W. Pokrzywa, 2022, bioRxiv.

Redefining the Practical Utility of Blood Transcriptome Biomarkers in Inflammatory Bowel Diseases

M. Mikuła, J. Ostrowski, A. Paziewska, 2018, Journal of Crohn's & colitis.

Obesity increases histone H3 lysine 9 and 18 acetylation at Tnfa and Ccl2 genes in mouse liver.

M. Mikuła, J. Ostrowski, Aneta Majewska, 2014, International journal of molecular medicine.

Mitochondria-associated satellite I RNA binds to hnRNP K protein.

M. Mikuła, J. Ostrowski, L. Wyrwicz, 2006, Acta biochimica Polonica.

Selective Extracellular Signal-Regulated Kinase 1/2 (ERK1/2) Inhibition by the SCH772984 Compound Attenuates In Vitro and In Vivo Inflammatory Responses and Prolongs Survival in Murine Sepsis Models

M. Mikuła, J. Ostrowski, M. Kulecka, 2021, International journal of molecular sciences.

Higher EU-TIRADS-Score Correlated with BRAF V600E Positivity in the Early Stage of Papillary Thyroid Carcinoma

M. Mikuła, J. Ostrowski, K. Woliński, 2021, Journal of clinical medicine.

Oncology Drug Repurposing for Sepsis Treatment

M. Mikuła, J. Ostrowski, M. Kulecka, 2022, Biomedicines.

Lack of miR-378 attenuates muscular dystrophy in mdx mice

M. Mikuła, J. Ostrowski, Katarzyna Pietraszek-Gremplewicz, 2020, JCI insight.

Synthetic lethality between VPS4A and VPS4B triggers an inflammatory response in colorectal cancer

M. Mikuła, K. Goryca, M. Cybulska, 2020, EMBO molecular medicine.

High Prevalence of Genetically Related Clostridium Difficile Strains at a Single Hemato-Oncology Ward Over 10 Years

M. Mikuła, J. Ostrowski, A. Paziewska, 2020, Frontiers in Microbiology.

The gastric microbiota in patients with Crohn’s disease; a preliminary study

M. Mikuła, J. Ostrowski, A. Paziewska, 2021, Scientific Reports.

Common functional alterations identified in blood transcriptome of autoimmune cholestatic liver and inflammatory bowel diseases

M. Mikuła, J. Ostrowski, K. Mucha, 2019, Scientific Reports.

Prediction of fetal blood group antigens from maternal plasma using Ion AmpliSeq HD technology

M. Mikuła, J. Ostrowski, M. Dębska, 2022, Transfusion.

Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers.

M. Mikuła, J. Ostrowski, M. Dadlez, 2013, Acta biochimica Polonica.

Serine Biosynthesis Pathway Supports MYC–miR-494–EZH2 Feed-Forward Circuit Necessary to Maintain Metabolic and Epigenetic Reprogramming of Burkitt Lymphoma Cells

M. Mikuła, M. Szydłowski, E. Jabłońska, 2020, Cancers.

Landscape of the hnRNP K protein–protein interactome

M. Mikuła, J. Ostrowski, L. Wyrwicz, 2006, Proteomics.

Editing of hnRNP K protein mRNA in colorectal adenocarcinoma and surrounding mucosa

J M Bujnicki, J Karczmarski, J. Bujnicki, 2006, British Journal of Cancer.

Gene expression alterations induced by low molecular weight heparin during bowel anastomosis healing in rats.

M. Skrzypczak, M. Mikuła, J. Ostrowski, 2011, Acta biochimica Polonica.

Expression changes of cell-cell adhesion-related genes in colorectal tumors.

Michal Mikula, Jerzy Ostrowski, M. Mikuła, 2015, Oncology letters.

PALB2 mutations in BRCA1/2-mutation negative breast and ovarian cancer patients from Poland

M. Mikuła, J. Ostrowski, A. Kluska, 2017, BMC Medical Genomics.

The N-Reductive System Composed of Mitochondrial Amidoxime Reducing Component (mARC), Cytochrome b5 (CYB5B) and Cytochrome b5 Reductase (CYB5R) Is Regulated by Fasting and High Fat Diet in Mice

M. Mikuła, J. Ostrowski, E. Hennig, 2014, PloS one.

Prediction of fetal blood group and platelet antigens from maternal plasma using next‐generation sequencing

M. Mikuła, J. Ostrowski, M. Dębska, 2019, Transfusion.

Limited Practical Utility of Liquid Biopsy in the Treated Patients with Advanced Breast Cancer

M. Mikuła, J. Ostrowski, A. Paziewska, 2020, Diagnostics.

Challenges in Cancer Biomarker Discovery Exemplified by the Identification of Diagnostic MicroRNAs in Prostate Tissues

M. Mikuła, J. Ostrowski, A. Paziewska, 2020, BioMed research international.

Transcriptional changes between uninflamed ulcerative colitis and familial adenomatous polyposis pouch mucosa can be attributed to an altered immune response.

M. Mikuła, J. Ostrowski, A. Paziewska, 2015, Acta biochimica Polonica.

Multi-Organ Transcriptome Dynamics in a Mouse Model of Cecal Ligation and Puncture-Induced Polymicrobial Sepsis

M. Mikuła, J. Ostrowski, M. Kulecka, 2021, Journal of inflammation research.

HNRNPK (heterogeneous nuclear ribonucleoprotein K)

M. Mikuła, J. Ostrowski, 2011 .

ESCRT-I fuels lysosomal degradation to restrict TFEB/TFE3 signaling via the Rag-mTORC1 pathway

M. Mikuła, A. Paziewska, M. Dąbrowska, 2022, Life Science Alliance.

A novel approach to genome-wide association analysis identifies genetic associations with primary biliary cholangitis and primary sclerosing cholangitis in Polish patients

M. Mikuła, J. Ostrowski, K. Mucha, 2017, BMC Medical Genomics.

Molecular Signature of Prospero Homeobox 1 (PROX1) in Follicular Thyroid Carcinoma Cells

M. Mikuła, J. Ostrowski, A. Paziewska, 2019, International Journal of Molecular Sciences.

Barrett's esophagus associates with a variant of IL23R gene.

J. Reguła, M. Mikuła, J. Ostrowski, 2008, Acta biochimica Polonica.

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis

M. Mikuła, J. Ostrowski, J. Karczmarski, 2015, Proteome Science.

Exome scale map of genetic alterations promoting metastasis in colorectal cancer

M. Skrzypczak, K. Ginalski, M. Mikuła, 2018, BMC Genetics.

ESCRT-I controls lysosomal membrane protein homeostasis and restricts MCOLN1-dependent TFEB/TFE3 signaling

M. Mikuła, A. Paziewska, M. Dąbrowska, 2021, bioRxiv.

Keratinocyte-specific ablation of Mcpip1 impairs skin integrity and promotes local and systemic inflammation

M. Mikuła, M. Fu, A. Paziewska, 2019, Journal of Molecular Medicine.

Gene Expression-Based Functional Differences between the Bladder Body and Trigonal Urothelium in Adolescent Female Patients with Micturition Dysfunction

M. Mikuła, J. Ostrowski, E. Hennig, 2022, Biomedicines.

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

M. Mikuła, K. Goryca, T. Rubel, 2014, BMC Research Notes.

jChIP: a graphical environment for exploratory ChIP-Seq data analysis

Krzysztof Chojnowski, Krzysztof Goryca, Tymon Rubel, 2014, BMC Research Notes.

Transcriptomes of human mesenchymal cells isolated from the right ventricle and epicardial fat differ strikingly both directly after isolation and long‐term culture

M. Mikuła, J. Ostrowski, M. Zembala, 2019, ESC heart failure.

Diarrheal-associated gut dysbiosis in cancer and inflammatory bowel disease patients is exacerbated by Clostridioides difficile infection

M. Mikuła, J. Ostrowski, M. Dąbrowska, 2023, Frontiers in cellular and infection microbiology.

Characteristics of the gut microbiome in esports players compared with those in physical education students and professional athletes

M. Mikuła, J. Ostrowski, A. Kluska, 2023, Frontiers in Nutrition.

PALB2 mutations in BRCA1/2-mutation negative breast and ovarian cancer patients from Poland

M. Mikuła, J. Ostrowski, A. Kluska, 2017, BMC Medical Genomics.

Loss of epidermal MCPIP1 is associated with aggressive squamous cell carcinoma

M. Mikuła, G. Fontemaggi, J. Szepietowski, 2021, Journal of experimental & clinical cancer research : CR.

Small Molecule Screens Identify CDK8-Inhibitors As Candidate Diamond-Blackfan Anemia Drugs

M. Mikuła, M. Wlodarski, T. Lundbäck, 2018, Blood.

A Strong Neutrophil Elastase Proteolytic Fingerprint Marks the Carcinoma Tumor Proteome*

M. Mikuła, J. Ostrowski, M. Dadlez, 2016, Molecular & Cellular Proteomics.

Additional file 5

Debra L. Fulton, Albert Kriegner, Martin Lauss, 2009 .

Leptin produced by obese adipose stromal/stem cells enhances proliferation and metastasis of estrogen receptor positive breast cancers

Debra L. Fulton, Jeffrey M. Gimble, Matthew E. Burow, 2015, Breast Cancer Research.

The role of the SHH gene in prostate cancer cell resistance to paclitaxel

M. Mikuła, M. Małecki, A. Lipiec, 2014, The Prostate.

Breast cancer but not the menopausal status is associated with small changes of the gut microbiota

M. Mikuła, M. Dąbrowska, A. Kluska, 2024, Frontiers in oncology.

Pre-analytical-related variability influencing serum peptide profiles demonstrated in a mass spectrometry-based search for colorectal and prostate cancer biomarkers.

M. Mikuła, J. Ostrowski, M. Dadlez, 2013, Acta biochimica Polonica.

Additional file 6

Fabio Stella, Alessandro Pandini, Debra L. Fulton, 2009 .