M. Holder

发表

The sheep genome illuminates biology of the rumen and lipid metabolism

Bronwen L. Aken, S. Searle, P. Flicek, 2014, Science.

A framework for human microbiome research

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Testing for differences in rates-across-sites distributions in phylogenetic subtrees.

Y. Inagaki, C. Field, M. Holder, 2002, Molecular biology and evolution.

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

David N. Messina, Ryan D. Hernandez, Jeffery P. Demuth, 2007, Science.

Structure, Function and Diversity of the Healthy Human Microbiome

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Paradoxical DNA Repair and Peroxide Resistance Gene Conservation in Bacillus pumilus SAFR-032

G. Weinstock, D. Muzny, L. Nazareth, 2007, PloS one.

A Catalog of Reference Genomes from the Human Microbiome

B. Haas, Q. Zeng, B. Birren, 2010, Science.

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima

Galina A. Erikson, Peshtewani K. Aqrawi, Adelaide C. Rhodes, 2014, PLoS biology.

A Massive Expansion of Effector Genes Underlies Gall-Formation in the Wheat Pest Mayetiola destructor

Susan J. Brown, Martin N. Andersson, D. Muzny, 2015, Current Biology.

Hemichordate genomes and deuterostome origins

Nicholas H. Putnam, R. Gibbs, L. Peshkin, 2015, Nature.

The Genome of the Model Beetle and Pest Tribolium Castaneum Vertebrate-specific Orthologues Insect-specific Orthologues Homology Undetectable Similarity

Peer Bork, Alexandre Souvorov, Liangjiang Wang, 2022 .

The genomes of two key bumblebee species with primitive eusocial organization

Erich Bornberg-Bauer, Lars Chittka, Marco Mariotti, 2015, Genome Biology.

SMRT Sequencing of Paramecium Bursaria Chlorella Virus-1 Reveals Diverse Methylation Stability in Adenines Targeted by Restriction Modification Systems

J. V. Van Etten, N. Ajami, J. Petrosino, 2020, Frontiers in Microbiology.

Genomic Minimalism in the Early Diverging Intestinal Parasite Giardia lamblia

Feng Chen, Daniel Palm, Susan M. Huse, 2007, Science.

Rhesus Macaque Genome Sequencing and Analysis Rhesus Macaque Genome Evolutionary and Biomedical Insights from the

Christian J. Buhay, Granger G. Sutton, Yan Ding, 2010 .

Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus

G. Weinstock, D. Muzny, L. Nazareth, 2007, BMC Microbiology.

Complete Genome Sequence of Streptococcus mitis Strain SVGS_061 Isolated from a Neutropenic Patient with Viridans Group Streptococcal Shock Syndrome

Erika J. Thompson, N. Ajami, J. Petrosino, 2016, Genome Announcements.

Finding the missing honey bee genes: lessons learned from a genome upgrade

Dan Graur, Mario Stanke, Monica C Munoz-Torres, 2014, BMC Genomics.

Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

Jennifer F. Hughes, T. Graves, R. Wilson, 2014, Nature.

Phylogenetic Position of the Trichomonad Parasite of Turkeys, Histomonas meleagridis (Smith) Tyzzer, Inferred from Small Subunit rRNA Sequence1

M. Sogin, R. Wintjens, M. Holder, 2001, The Journal of eukaryotic microbiology.

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

Steve Rozen, Christian J. Buhay, Donna M. Muzny, 2012, Nature.

A type VII secretion system of Streptococcus gallolyticus subsp. gallolyticus contributes to gut colonization and the development of colon tumors

J. Petrosino, M. Holder, Xinsheng Gao, 2021, PLoS pathogens.

Sequence type 1 group B Streptococcus, an emerging cause of invasive disease in adults, evolves by small genetic changes

Erika J. Thompson, Miguel A. Saldaña, N. Ajami, 2015, Proceedings of the National Academy of Sciences.

The Giardia genome project database.

C. Reich, M. Sogin, H. Morrison, 2000, FEMS microbiology letters.

Challenges of Francisella classification exemplified by an atypical clinical isolate.

R. Gibbs, J. Petrosino, G. Metcalf, 2017, Diagnostic microbiology and infectious disease.

Complete Genome Sequence of Vibrio gazogenes ATCC 43942

N. Ajami, J. Petrosino, M. Holder, 2017, Genome Announcements.

Complete Genome Sequence of Turicibacter sp. Strain H121, Isolated from the Feces of a Contaminated Germ-Free Mouse

N. Ajami, J. Petrosino, M. Holder, 2016, Genome Announcements.

Corrigendum: Mammalian Y chromosomes retain widely expressed dosage-sensitive regulators

Jennifer F. Hughes, T. Graves, R. Wilson, 2014, Nature.

Pelobionts are degenerate protists: insights from molecules and morphology.

M. Sogin, M. Holder, A. Simpson, 2002, Molecular biology and evolution.

Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea

R. Gibbs, D. Muzny, J. Petrosino, 2023, bioRxiv.

The genome of the model beetle and pest Tribolium castaneum

Susan J. Brown, Jeffery P. Demuth, Robert M. Waterhouse, 2008, Nature.

Finding the missing honey bee genes: lessons learned from a genome upgrade

Radhika S. Khetani, R. Guigó, R. Gibbs, 2014, BMC Genomics.

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

David N. Messina, Matthew W. Hahn, Miriam K. Konkel, 2007 .