L. Vinh

发表

IQPNNI: moving fast through tree space and stopping in time.

A. von Haeseler, L. Vinh, 2004, Molecular biology and evolution.

POY version 4: phylogenetic analysis using dynamic homologies

W. Wheeler, L. Vinh, Andrés Varón, 2010, Cladistics : the international journal of the Willi Hennig Society.

UFBoot2: Improving the Ultrafast Bootstrap Approximation

A. von Haeseler, L. Vinh, B. Minh, 2017, bioRxiv.

Random Tree-Puzzle leads to the Yule-Harding distribution.

A. von Haeseler, L. Vinh, A. Fuehrer, 2011, Molecular biology and evolution.

FLAVI: An Amino Acid Substitution Model for Flaviviruses

L. Vinh, Thu Kim Le, 2020, Journal of Molecular Evolution.

Building minimum recombination ancestral recombination graphs for whole genomes

L. Vinh, N. Thao, 2017, 2017 4th NAFOSTED Conference on Information and Computer Science.

Phylogenetic and Phylogenomic Analyses for Large Datasets

L. Vinh, 2019, Journal of Research and Development on Information and Communication Technology.

De novo homozygous variant of the SCN1A gene in a patient with severe Dravet syndrome complicated by acute encephalopathy

L. Vinh, N. Hieu, Le Thi Khanh Van, 2021, neurogenetics.

AB050. Building population-specific reference genomes: a case study of Vietnamese reference genome.

Pham Bao Son, Le Si Quang, L. Vinh, 2015 .

A protein secondary structure-based algorithm for partitioning large protein alignments

L. Vinh, Thu Kim Le, 2022, 2022 14th International Conference on Knowledge and Systems Engineering (KSE).

Estimating amino acid substitution models for metazoan evolutionary studies

L. Vinh, C. C. Dang, 2023, Journal of evolutionary biology.

A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation

Alexandros Stamatakis, Tomás Flouri, Arndt von Haeseler, 2016, 2016 Eighth International Conference on Knowledge and Systems Engineering (KSE).

Computational Molecular Evolution—Ziheng Yang. 2006. Oxford University Press, Oxford. 376 pp. ISBN 978-0-19-856699-1 (ISBN-10 0-19-856699-9) £60 $115 (hardback). ISBN 978-0-19-856702-8 (ISBN-10 0-19-856702-2) £27.50 $52.50 (paperback).

A. Haeseler, L. Vinh, 2007 .

Shortest triplet clustering: reconstructing large phylogenies using representative sets

Arndt von Haeseler, Le Sy Vinh, A. Haeseler, 2005, BMC Bioinformatics.

Genomedics: Whole exome analysis system for clinical studies

Le Sy Vinh, N. D. Canh, Nguyen Duc Canh, 2017, 2017 9th International Conference on Knowledge and Systems Engineering (KSE).

QMaker: Fast and Accurate Method to Estimate Empirical Models of Protein Evolution

Le Sy Vinh, Bui Quang Minh, Robert Lanfear, 2020, bioRxiv.

Protein Type Specific Amino Acid Substitution Models for Influenza Viruses

Si Quang Le, Le Sy Vinh, Nguyen Van Sau, 2011, 2011 Third International Conference on Knowledge and Systems Engineering.

MVRM: A Hybrid Approach to Predict siRNA Efficacy

Ho Tu Bao, Le Sy Vinh, Bui Ngoc Thang, 2015, 2015 Seventh International Conference on Knowledge and Systems Engineering (KSE).

Large Maximum Likelihood Trees

Arndt von Haeseler, Le Sy Vinh, Bui Quang Minh, 2006 .

Exploring the Kinh Vietnamese genomic database for the polymorphisms of the P450 genes towards precision public health

L. Vinh, D. T. Hoang, K. Tran, 2022, Annals of human biology.

ReplacementMatrix: a web server for maximum-likelihood estimation of amino acid replacement rate matrices

Olivier Gascuel, Vincent Lefort, Si Quang Le, 2011, Bioinform..

MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

A. von Haeseler, A. Stamatakis, L. Vinh, 2018, BMC Evolutionary Biology.

nQMaker: Estimating Time Nonreversible Amino Acid Substitution Models

R. Lanfear, J. Masel, L. Vinh, 2021, bioRxiv.

Building Population-Specific Reference Genomes: A Case Study of Vietnamese Reference Genome

Si Quang Le, Le Sy Vinh, Bui Quang Minh, 2015, 2015 Seventh International Conference on Knowledge and Systems Engineering (KSE).

An Improved Algorithm for Genome Rearrangements

Thang N. Dinh, Huan X. Hoang, L. Vinh, 2009 .

Towards Phylogenomic Reconstruction

Daniel Janies, Ward C. Wheeler, Andrés Varón, 2007, BIOCOMP.

Pairwise alignment with rearrangements.

Le Sy Vinh, Andrés Varón, Ward C Wheeler, 2006, Genome informatics. International Conference on Genome Informatics.

Whole genome analysis of a Vietnamese trio

Do Duc Dong, Pham Bao Son, Dang Cao Cuong, 2015, Journal of Biosciences.

MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation

A. von Haeseler, A. Stamatakis, L. Vinh, 2018, BMC Evolutionary Biology.

FastMG: a simple, fast, and accurate maximum likelihood procedure to estimate amino acid replacement rate matrices from large data sets

Olivier Gascuel, Si Quang Le, Le Sy Vinh, 2014, BMC Bioinformatics.

In?uenza-specific Amino Acid Substitution Model

Dang Cao Cuong, Le Si Quang, L. Vinh, 2009, 2009 International Conference on Knowledge and Systems Engineering.

Detecting Bad SNPs from Illumina BeadChips Using Jeffreys Distance

Si Quang Le, Son Hoang Nguyen, Le Sy Vinh, 2012, 2012 Fourth International Conference on Knowledge and Systems Engineering.

A protein alignment partitioning method for protein phylogenetic inference

Thu Le Kim, L. Vinh, Thu Kim Le, 2020, 2020 RIVF International Conference on Computing and Communication Technologies (RIVF).

PhyNav: A Novel Approach to Reconstruct Large Phylogenies

Arndt von Haeseler, Le Sy Vinh, Heiko A. Schmidt, 2004, GfKl.

pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies

A. Haeseler, L. Vinh, H. Schmidt, 2005, Bioinform..

Building Ancestral Recombination Graphs for Whole Genomes

Si Quang Le, Le Sy Vinh, Thao Thi Phuong Nguyen, 2017, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Rooting Phylogenetic Trees from Protein Alignments

L. Vinh, C. C. Dang, Tinh H. Nguyen, 2023, 2023 15th International Conference on Knowledge and Systems Engineering (KSE).