Jeffrey H. Miller

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Different spike mechanisms in axon and soma of molluscan neurone

D. Junge, Jeffrey H. Miller, 1974, Nature.

Genome sequence of the hyperthermophilic crenarchaeon Pyrobaculum aerophilum

Melvin I Simon, M. Simon, Jeffrey H. Miller, 2002, Proceedings of the National Academy of Sciences of the United States of America.

A Short Course in Bacterial Genetics: A Laboratory Manual and Handbook for Escherichia coli and Rela

Jeffrey H. Miller, 1992 .

Experiments in molecular genetics

Jeffrey H. Miller, 1972 .

The COMBREX Project: Design, Methodology, and Initial Results

Michael Y. Galperin, S. Salzberg, R. Greiner, 2013, PLoS biology.

Exploring Synergy between Classic Mutagens and Antibiotics To Examine Mechanisms of Synergy and Antibiotic Action

Tina Manzhu Kang, P. Yeh, Jeffrey H. Miller, 2015, Antimicrobial Agents and Chemotherapy.

Patterns of Inheritance

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Tackling antibiotic resistance

Timothy R. Walsh, Alexander Tomasz, Christopher M. Thomas, 2011, Nature Reviews Microbiology.

Molecular basis of base substitution hotspots in Escherichia coli

Philip J. Farabaugh, Walter Gilbert, W. Gilbert, 1978, Nature.

Mutagenic deamination of cytosine residues in DNA

Jeffrey H. Miller, Bruce K. Duncan, B. Duncan, 1980, Nature.

Direct Interaction between Uracil-DNA Glycosylase and a Proliferating Cell Nuclear Antigen Homolog in the CrenarchaeonPyrobaculum aerophilum *

Jeffrey H. Miller, J. Jiricny, S. Fitz-Gibbon, 2002, The Journal of Biological Chemistry.

Microbial Genomics—Challenges and Opportunities: The 9th International Conference on Microbial Genomes

Jizhong Zhou, Jizhong Zhou, Jeffrey H. Miller, 2002, Journal of bacteriology.

Correlation of nonsense sites in the lacI gene with specific codons in the nucleotide sequence

Philip J. Farabaugh, Jeffrey H. Miller, P. Farabaugh, 1978, Nature.

Antibiotic Sensitivity Profiles Determined with an Escherichia coli Gene Knockout Collection: Generating an Antibiotic Bar Code

Kim Lee, Jeffrey H. Miller, Anne Liu, 2010, Antimicrobial Agents and Chemotherapy.

Determination of Antibiotic Hypersensitivity among 4,000 Single-Gene-Knockout Mutants of Escherichia coli

Jeffrey H. Miller, Hanjing Yang, Parrisa Solaimani, 2008, Journal of bacteriology.

GUG and UUG are initiation codons in vivo

Jeffrey H. Miller, 1974 .

DNA sequence at the integration sites of the insertion element IS1

Jeffrey H. Miller, M. Calos, L. Johnsrud, 1978, Cell.

Transposable elements

Jeffrey H. Miller, M. Calos, 1980, Cell.

MutY catalytic core, mutant and bound adenine structures define specificity for DNA repair enzyme superfamily

J. Tainer, Jeffrey H. Miller, R. Lloyd, 1998, Nature Structural Biology.

Mitochondria and aging

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 2000 .

Regulation of transcription factors

R. Lewontin, D. Suzuki, W. Gelbart, 1999 .

Myh Deficiency Enhances Intestinal Tumorigenesis in Multiple Intestinal Neoplasia (ApcMin/+) Mice

O. Sieber, A. Rowan, B. Spencer‐Dene, 2004, Cancer Research.

Isolation and Mapping

Jeffrey H. Miller, D. Gho, 2019 .

Discovering Variation in Genetically Monomorphic Bacteria : SNPs and the Evolution of Salmonella Typhi ”

Jeffrey H. Miller, J. Bristow, 2011 .

Carcinogens induce targeted mutations in Escherichia coli

Jeffrey H. Miller, 1982, Cell.

Evidence that YycJ is a novel 5'-3' double-stranded DNA exonuclease acting in Bacillus anthracis mismatch repair.

Upendra K. Kar, J. Hoch, Jeffrey H. Miller, 2013, DNA repair.

Origin of new genes

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Research Article 10: Strains with the Promoter Deletion L1 Synthesize An Altered lac Repressor

K. Weber, Jeffrey H. Miller, T. Platt, 1970 .

Catabolite Sensitive Site of the lac Operon

W. Reznikoff, Jeffrey H. Miller, J. Beckwith, 1969, Nature.

An Introduction to Genetic Analysis, 7th edition

Anthony Jf Griffiths, David T Suzuki, Richard C Lewontin, 2000 .

Cells deficient in oxidative DNA damage repair genes Myh and Ogg1 are sensitive to oxidants with increased G2/M arrest and multinucleation.

Jiuyong Xie, G. Hicks, Jeffrey H. Miller, 2008, Carcinogenesis.

Selective Advantage of Resistant Strains at Trace Levels of Antibiotics: a Simple and Ultrasensitive Color Test for Detection of Antibiotics and Genotoxic Agents

Jeffrey H. Miller, A. Salih, R. Hoffman, 2011, Antimicrobial Agents and Chemotherapy.

Perspective on Mutagenesis and Repair: The Standard Model and Alternate Modes of Mutagenesis

Jeffrey H. Miller, 2005, Critical reviews in biochemistry and molecular biology.

Synergistic Interactions of Vancomycin with Different Antibiotics against Escherichia coli: Trimethoprim and Nitrofurantoin Display Strong Synergies with Vancomycin against Wild-Type E. coli

Tina Manzhu Kang, P. Yeh, Jeffrey H. Miller, 2014, Antimicrobial Agents and Chemotherapy.

Deoxycytidine Deaminase-Deficient Escherichia coli Strains Display Acute Sensitivity to Cytidine, Adenosine, and Guanosine and Increased Sensitivity to a Range of Antibiotics, Including Vancomycin

Tina Manzhu Kang, Jeffrey H. Miller, Casey Beppler, 2014, Journal of bacteriology.

The Molecular Basis of Mutation

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

When more is less: Emergent suppressive interactions in three-drug combinations

Robert Damoiseaux, Elif Tekin, Zhiyuan Mao, 2017, BMC Microbiology.

Direction of Transcription of a Regulatory Gene in E. coli

Jeffrey H. Miller, J. Beckwith, B. Muller-Hill, 1968, Nature.

New Controlling Element in the Lac Operon of E. coli

Jeffrey H. Miller, J. Beckwith, KARIN IPPEN, 1968, Nature.

A short course in bacterial genetics

Jeffrey H. Miller, Jeffrey H Miller, 1992 .

Effects of Amino Acid Substitutions at he Active Site in Escherichia coli @-Galactosidase

Jeffrey H. Miller, C. Cupples, 2002 .

The Use of Suppressed Nonsense Mutations to Generate Altered Lac Repressor Molecules

Jeffrey H. Miller, A. Schmitz, P. Lu, 1975 .

The Aminoglycoside Antibiotic Kanamycin Damages DNA Bases in Escherichia coli: Caffeine Potentiates the DNA-Damaging Effects of Kanamycin while Suppressing Cell Killing by Ciprofloxacin in Escherichia coli and Bacillus anthracis

Tina Manzhu Kang, Jeffrey H. Miller, A. Nguyen, 2012, Antimicrobial Agents and Chemotherapy.

Elinne coli and Bacillus anthracis Cell Killing by Ciprofloxacin in Escherichia Effects of Kanamycin while Suppressing Caffeine Potentiates the DNA-Damaging Damages DNA Bases in Escherichia coli : The Aminoglycoside Antibiotic Kanamycin

Tina Manzhu Kang, Jeffrey H. Miller, A. Nguyen, 2012 .

Mutagenicity of the cytidine analog zebularine in Escherichia coli.

Jeffrey H. Miller, Grace Lee, E. Wolff, 2004, DNA repair.

Use of the rpoB gene to determine the specificity of base substitution mutations on the Escherichia coli chromosome.

Jeffrey H. Miller, Ayuko A. Iverson, Tiffany T. Huang, 2003, DNA repair.

Biochemical Characterization of Uracil Processing Activities in the Hyperthermophilic Archaeon Pyrobaculum aerophilum *

Jeffrey H. Miller, J. Jiricny, S. Fitz-Gibbon, 2001, The Journal of Biological Chemistry.

The Structure and Replication of DNA

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Mutagenesis: Interactions with a parallel universe.

Jeffrey H. Miller, 2018, Mutation research.

Mutagen Synergy: Hypermutability Generated by Specific Pairs of Base Analogs

Jeffrey H. Miller, Lisa Yun Song, Madeline Yung, 2016, Journal of bacteriology.

The role of Bacillus anthracis RecD2 helicase in DNA mismatch repair.

Jeffrey H. Miller, Hanjing Yang, Madeline Yung, 2011, DNA repair.

Mutagenesis and Repair in Bacillus anthracis: the Effect of Mutators

Jeffrey H. Miller, Hanjing Yang, Krystle Zeibell, 2007, Journal of bacteriology.

On the formation of spontaneous deletions: The importance of short sequence homologies in the generation of large deletions

A. Albertini, Jeffrey H. Miller, M. Calos, 1982, Cell.

Mutation and cancer

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Escherichia coli strains (ndk) lacking nucleoside diphosphate kinase are powerful mutators for base substitutions and frameshifts in mismatch-repair-deficient strains.

Jeffrey H. Miller, P. Funchain, M. Slupska, 2002, Genetics.

Cytoplasmic male sterility

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Deficiencies in mouse Myh and Ogg1 result in tumor predisposition and G to T mutations in codon 12 of the K-ras oncogene in lung tumors.

D. Barnes, D. Shibata, Jeffrey H. Miller, 2004, Cancer research.

In vitro and in vivo studies of MutS, MutL and MutH mutants: correlation of mismatch repair and DNA recombination.

Jeffrey H. Miller, Wei Yang, P. Funchain, 2003, DNA repair.

Structure of the MutL C‐terminal domain: a model of intact MutL and its roles in mismatch repair

R. Ghirlando, Jeffrey H. Miller, Wei Yang, 2004, The EMBO journal.

Encyclopedia of genetics

Sydney Brenner, S. Brenner, Jeffrey H. Miller, 2002 .

Genetic Studies of Lac Repressor: 4000 Single Amino Acid Substitutions and Analysis of the Resulting Phenotypes on the Basis of the Protein Structure

Jeffrey Miller, Jörg Suckow, Peter Markiewicz, 1996, German Conference on Bioinformatics.

Specificity of mutagenesis resulting from the induction of the SOS system in the absence of mutagenic treatment

Jeffrey H. Miller, K. Low, Jeffrey H Miller, 1984, Cell.

Polymerases Leave Fingerprints: Analysis of the Mutational Spectrum in Escherichia coli rpoB To Assess the Role of Polymerase IV in Spontaneous Mutation

Jeffrey H. Miller, Hanjing Yang, Mandy Kim, 2004, Journal of bacteriology.

I, Microbiologist: A Discovery-Based Course in Microbial Ecology and Molecular Evolution

Erin R. Sanders, Jeffrey H Miller, Craig W. Herbold, 2010 .

Deletions fusing the i and lac regions of the chromosome in E. coli: Isolation and mapping

Jeffrey H. Miller, D. Gho, 2004, Molecular and General Genetics MGG.

Structure of a paradigm

Jeffrey H. Miller, 1996, Nature Structural Biology.

The Role of the Promoter Site in Gene Expression

Jeffrey H. Miller, J. Beckwith, J. Scaife, 1968 .

Sex chromosomes and sex-linked inheritance

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Competition between MutY and Mismatch Repair at A · C Mispairs In Vivo

Jeffrey H. Miller, Tiffany T. Huang, Mandy Kim, 2003, Journal of bacteriology.

MutM, a protein that prevents G.C----T.A transversions, is formamidopyrimidine-DNA glycosylase

L Pham, M L Michaels, C Cruz, 1991, Nucleic Acids Res..

Determination of hypersensitivity to genotoxic agents among Escherichia coli single gene knockout mutants.

Jeffrey H. Miller, Frank Chen, E. Becket, 2010, DNA repair.

Population and Evolutionary Genetics

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

DNA sequence alteration resulting from a mutation impairing promoter function in the lac repressor gene

Jeffrey H. Miller, M. Calos, Michèle P. Calos, 1980, Molecular and General Genetics MGG.

In vivo Degradation of Mutant Lac Repressor

K. Weber, Jeffrey H. Miller, T. Platt, 1970, Nature.

The transposon Tn9 generates a 9 bp repeated sequence during integration

Jeffrey H. Miller, M. Calos, L. Johnsrud, 1978, Cell.

Accumulation of the Oxidative Base Lesion 8-Hydroxyguanine in DNA of Tumor-Prone Mice Defective in Both the Myh and Ogg1 DNA Glycosylases

D. Barnes, Jeffrey H. Miller, E. Parlanti, 2004, Cancer Research.

Gene amplification in the lac region of E. coli

A. Albertini, Jeffrey H. Miller, T. Tlsty, 1984, Cell.

Mechanisms of Recombination

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Recombinant DNA Technology

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

Gene transfer vectors for mammalian cell

Jeffrey H. Miller, M. Calos, 1987 .

Pairwise antibiotic interactions in Escherichia coli: triclosan, rifampicin and aztreonam with nine other classes of antibiotics

P. Yeh, Jeffrey H. Miller, Ayesha Khan, 2016, The Journal of Antibiotics.

Single-Gene Deletion Mutants of Escherichia coli with Altered Sensitivity to Bicyclomycin, an Inhibitor of Transcription Termination Factor Rho

Jeffrey H. Miller, M. Gottesman, R. Washburn, 2011, Journal of bacteriology.

Mutational Consequences of Ciprofloxacin in Escherichia coli

Jeffrey H. Miller, Lisa Yun Song, Madeline Yung, 2016, Antimicrobial Agents and Chemotherapy.

Genetics and Biology

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

Metagenomic DNA fragments that affect Escherichia coli mutational pathways

Jeffrey H. Miller, Hanjing Yang, K. To, 2006, Molecular microbiology.

Uncovering emergent interactions in three-way combinations of stressors

Elif Tekin, Zhiyuan Mao, P. Yeh, 2016, Journal of The Royal Society Interface.

The sequence of a subtilisin‐type protease (aerolysin) from the hyperthermophilic archaeum Pyrobaculum aerophilum reveals sites important to thermostability

Jeffrey H. Miller, K. Stetter, P. Markiewicz, 1994, Protein science : a publication of the Protein Society.

Penetrance and expressivity

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Developing a genetic system in Deinococcus radiodurans for analyzing mutations.

Jeffrey H. Miller, A. Earl, J. Battista, 2004, Genetics.

Functional Expression of hMYH, a Human Homolog of the Escherichia coli MutY Protein

Jeffrey H. Miller, M. Slupska, Hanjing Yang, 1999, Journal of bacteriology.

Mutator Effects in Escherichia coli Caused by the Expression of Specific Foreign Genes

Jeffrey H. Miller, M. Yamamoto, Vanessa E. Gabrovsky, 2005, Journal of bacteriology.

Identification of mutator genes and mutational pathways in Escherichia coli using a multicopy cloning approach

Jeffrey H. Miller, Hanjing Yang, Mandy Kim, 2004, Molecular microbiology.

Mutants with Temperature-Sensitive Defects in the Escherichia coli Mismatch Repair System: Sensitivity to Mispairs Generated In Vivo

Jeffrey H. Miller, P. Funchain, M. Slupska, 2005, Journal of bacteriology.

Polynucleotide Phosphorylase Plays an Important Role in the Generation of Spontaneous Mutations in Escherichia coli

Alexander B. Cosico, Jeffrey H. Miller, Madeline Yung, 2012, Journal of bacteriology.

Direct Selection for Mutators inEscherichia coli

Jeffrey H. Miller, Jennifer H. Tai, A. Yeung, 1999, Journal of bacteriology.

Examination of the Role of DNA Polymerase Proofreading in the Mutator Effect of Miscoding tRNAs

Jeffrey H. Miller, M. Slupska, A. King, 1998, Journal of bacteriology.

Amplification of Mutator Cells in a Population as a Result of Horizontal Transfer

Jeffrey H. Miller, P. Funchain, W. Clendenin, 2001, Journal of bacteriology.

Deletion of dnaN1 generates a mutator phenotype in Bacillus anthracis.

Jeffrey H. Miller, Hanjing Yang, 2008, DNA repair.

"There were giants in the earth in those days." Genesis 6:4.

Jeffrey H. Miller, 2014, Research in microbiology.

A fosmid-based genomic map and identification of 474 genes of the hyperthermophilic archaeonPyrobaculum aerophilum

M. Simon, Jeffrey H. Miller, U. Kim, 1997, Extremophiles.

Bacterial genetic systems

Jeffrey H. Miller, 1991 .

Transcription: an overview of gene regulation in eukaryotes

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

The Nature of DNA

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

Protein Function and Malfunction in Cells

R. Lewontin, W. Gelbart, Jeffrey H. Miller, 1999 .

Slupska, M.M. et al. Cloning and sequencing a human homolog (hMYH) of the Escherichia coli mutY gene whose function is required for the repair of oxidative DNA damage. J. Bactiol. 178, 3885−3892

Jeffrey H. Miller, M. Slupska, C. Baikalov, 1996 .

Properties of RNA

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Altered RNA Polymerases Resulting from Temperature-sensitive Mutations in the rif Region of the E. coli Chromosome

Jeffrey H. Miller, S. Nasi, G. Gross, 1976 .

Recombination of Genes

William M. Gelbart, Anthony Jf Griffiths, Richard C Lewontin, 1999 .

The prevention of hepatitis B by vaccine.

S. Hadler, Jeffrey H. Miller, D. Ostrow, 2020, Dental update.

Advances in Brief Accumulation of the Oxidative Base Lesion 8-Hydroxyguanine in DNA of Tumor-Prone Mice Defective in Both the Myh and Ogg 1 DNA Glycosylases

D. Barnes, Jeffrey H. Miller, E. Parlanti, 2004 .

Genetic studies of the lac repressor. VII. On the molecular nature of spontaneous hotspots in the lacI gene of Escherichia coli.

J. Miller, Jeffrey H. Miller, P. Farabaugh, 1978, Journal of molecular biology.

Genetic studies of the lac repressor. II. Fine structure deletion map of the lacI gene, and its correlation with the physical map.

J. Miller, Jeffrey H. Miller, D. Ganem, 1977, Journal of molecular biology.

Effects of surrounding sequence on the suppression of nonsense codons.

J. Miller, A. Albertini, Jeffrey H. Miller, 1983, Journal of molecular biology.

Genetic and sequence analysis of frameshift mutations induced by ICR-191.

J. Miller, Jeffrey H. Miller, M. Calos, 1981, Journal of molecular biology.

Molecular consequences of deletion formation mediated by the transposon TN9

Jeffrey H. Miller, M. Calos, 1980, Nature.

Genetic studies of the lac repressor. X. Analysis of missense mutations in the lacI gene.

J. Miller, Jeffrey H. Miller, U. Schmeissner, 1979, Journal of molecular biology.

Genetic studies of the lac repressor. V. Repressors which bind operator more tightly generated by suppression and reversion of nonsense mutations.

J. Miller, Jeffrey H. Miller, A. Schmitz, 1978, Journal of molecular biology.

Genetic studies of the lac repressor. III. Additional correlation of mutational sites with specific amino acid residues.

J. Miller, Jeffrey H. Miller, C. Coulondre, 1977, Journal of molecular biology.

Genetic studies of the lac repressor. I. Correlation of mutational sites with specific amino acid residues: construction of a colinear gene-protein map.

J H Miller, J. Miller, Jeffrey H. Miller, 1977, Journal of molecular biology.

Somatic versus germinal mutation

R. Lewontin, D. Suzuki, W. Gelbart, 2000 .

Genetic studies of the lac repressor. IX. Generation of altered proteins by the suppression of nonsence mutations.

J H Miller, J. Miller, Jeffrey H. Miller, 1979, Journal of molecular biology.

Mutations induced by Bleomycin, 4-nitroquinoline-1-oxide, and hydrogen peroxide in the rpoB gene of Escherichia coli: Perspective on Mutational Hotspots.

Jeffrey H. Miller, Spring Hwang, Jasmine Thai, 2020, Mutation research.

The lacI Gene: Its Role in lac Operon Control and Its Use as a Genetic System

Jeffrey H. Miller, 1980 .

The DNA sequence change resulting from the IQ1mutation, which greatly increases promoter strength

Jeffrey H. Miller, M. Calos, 2004, Molecular and General Genetics MGG.

The Molecular Basis of Spontaneous Deletions

A. Albertini, Jeffrey H. Miller, M. Calos, 1983 .

Locating the Genes

R. Lewontin, D. Suzuki, W. Gelbart, 1999 .

Deletion of dnaN1 generates a mutator phenotype in Bacillus anthracis.

Jeffrey H. Miller, Hanjing Yang, 2008, DNA repair.

Forming Complex Pattern: Establishing Positional Information

William M. Gelbart, Anthony Jf Griffiths, Richard C Lewontin, 1999 .

Enhanced characterization of the thyA system for mutational analysis in Escherichia coli: Defining mutationally "hot" regions of the gene.

Jeffrey H. Miller, Daniel Mishail, Lekha Yaramada, 2021, Mutation research.

Direct Interaction between Uracil-DNA Glycosylase and a Proliferating Cell Nuclear Antigen Homolog in the CrenarchaeonPyrobaculum aerophilum *

Jeffrey H. Miller, J. Jiricny, S. Fitz-Gibbon, 2002, The Journal of Biological Chemistry.

Regulation of Gene Transcription

R. Lewontin, D. Suzuki, W. Gelbart, 1999 .