J. Posakony

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Correct developmental expression of a cloned alcohol dehydrogenase gene transduced into the drosophila germ line

T. Maniatis, D. Goldberg, J. Posakony, 1983, Cell.

Supporting Online Material Materials and Methods Figs. S1 to S50 Tables S1 to S18 References Identification of Functional Elements and Regulatory Circuits by Drosophila Modencode

Gos Micklem, Lincoln D Stein, Daniel Marbach, 2022 .

A cis-regulatory map of the Drosophila genome

Robert L. Grossman, Mark Gerstein, Manolis Kellis, 2011, Nature.

Genetic programs activated by proneural proteins in the developing Drosophila PNS.

J. Posakony, N. Reeves, Nick L. Reeves, 2005, Developmental cell.

The Bearded box, a novel 3' UTR sequence motif, mediates negative post-transcriptional regulation of Bearded and Enhancer of split Complex gene expression.

E. Lai, J. Posakony, J W Posakony, 1997, Development.

The K box, a conserved 3' UTR sequence motif, negatively regulates accumulation of enhancer of split complex transcripts.

C Burks, C. Burks, E. Lai, 1998, Development.

Posterior stripe expression of hunchback is driven from two promoters by a common enhancer element.

J. Posakony, E. Steingrímsson, J. Lengyel, 1995, Development.

SCORE: A computational approach to the identification of cis-regulatory modules and target genes in whole-genome sequence data

Mark Rebeiz, James W Posakony, J. Posakony, 2002, Proceedings of the National Academy of Sciences of the United States of America.

The structure and evolution of the human β-globin gene family

Tom Maniatis, Sherman M. Weissman, Francisco E. Baralle, 1980, Cell.

Automated tools for comparative sequence analysis of genic regions using the GenePalette application.

J. Posakony, M. Rebeiz, Andrew F. Smith, 2017, Developmental biology.

Three habits of highly effective signaling pathways: principles of transcriptional control by developmental cell signaling.

Scott Barolo, James W Posakony, S. Barolo, 2002, Genes & development.

Lateral inhibition in proneural clusters: cis-regulatory logic and default repression by Suppressor of Hairless

Scott Barolo, S. Barolo, J. Posakony, 2005, Development.

Suppressor of hairless directly activates transcription of enhancer of split complex genes in response to Notch receptor activity.

J. Posakony, A. Bailey, J W Posakony, 1995, Genes & development.

The structure and evolution of the human beta-globin gene family.

S. Weissman, T. Maniatis, R. Spritz, 1980, Cell.

Disparate expression specificities coded by a shared Hox-C enhancer

Steven W. Miller, J. Posakony, 2020, eLife.

Control of Gene Expression

M. Ashburner, K. Struhl, A. Spradling, 1974, Advances in Experimental Medicine and Biology.

Experimental selection of hypoxia-tolerant Drosophila melanogaster

Ali Bashir, Vineet Bafna, Shankar Subramaniam, 2011, Proceedings of the National Academy of Sciences.

Dpbx, a new homeobox gene closely related to the human proto-oncogene pbxl molecular structure and developmental expression

A. Bang, J. Posakony, C. Murre, 1993, Mechanisms of Development.

An ancient transcriptional regulatory linkage.

J. Posakony, M. Rebeiz, T. Stone, 2005, Developmental biology.

Disparate expression specificities coded by a shared Hox-C enhancer

Steven W. Miller, J. Posakony, 2018, bioRxiv.

A small region surrounding the distal promoter of the hunchback gene directs maternal expression.

J. Posakony, J. Margolis, M. Borowsky, 1994, Developmental biology.

KCNQ potassium channel mutations cause cardiac arrhythmias in Drosophila that mimic the effects of aging

Karen Ocorr, Rolf Bodmer, Soichiro Yasuda, 2007, Proceedings of the National Academy of Sciences.

Repetitive sequences of the sea urchin genome. Distribution of members of specific repetitive families.

R. Britten, E. Davidson, R. Scheller, 1981, Journal of molecular biology.

Lateral inhibition: Two modes of non-autonomous negative autoregulation by neuralized

Steven W. Miller, J. Posakony, 2018, PLoS genetics.

The cell cycle program of polypeptide labeling in Chlamydomonas reinhardtii

J. Posakony, S. Howell, K. R. Hill, 1977, The Journal of cell biology.

Molecular structure of maternal RNA

R. Britten, E. Davidson, J. Posakony, 2004, Chromosoma.

Hairless promotes stable commitment to the sensory organ precursor cell fate by negatively regulating the activity of the Notch signaling pathway.

A. Bang, J. Posakony, A. Bailey, 1995, Developmental biology.

Hairless as a novel component of the Notch signaling pathway

Steven W. Miller, J. Posakony, Artem Movsesyan, 2019, bioRxiv.

9 – Interspersed Maternal RNA of Sea Urchin and Amphibian Eggs

E. Davidson, H. Jacobs, J. Posakony, 1985 .

A dual function of the Notch gene in Drosophila sensillum development.

V. Hartenstein, J. Posakony, 1990, Developmental biology.

Suppressor of Hairless, the Drosophila homolog of the mouse recombination signal-binding protein gene, controls sensory organ cell fates

J. Posakony, F. Schweisguth, 1992, Cell.

extramacrochaetae, a negative regulator of sensory organ development in Drosophila, defines a new class of helix-loop-helix proteins

J. Posakony, H. Ellis, Dennis R. Spann, 1990, Cell.

Nature versus nurture: Asymmetric cell divisions in Drosophila bristle development

J. Posakony, 1994, Cell.

Antagonistic activities of Suppressor of Hairless and Hairless control alternative cell fates in the Drosophila adult epidermis.

J. Posakony, F. Schweisguth, François Schweisguth, 1994, Development.

Negative regulation of proneural gene activity: hairy is a direct transcriptional repressor of achaete.

J. Posakony, A. Bailey, J W Posakony, 1994, Genes & development.

Ancestral and conserved cis-regulatory architectures in developmental control genes.

Feng Yue, J. Posakony, M. Rebeiz, 2012, Developmental biology.

Subcellular localization of Suppressor of Hairless in Drosophila sense organ cells during Notch signalling.

M. Gho, J. Posakony, F. Schweisguth, 1996, Development.

Hairless is required for the development of adult sensory organ precursor cells in Drosophila.

V. Hartenstein, A. Bang, J. Posakony, 1991, Development.

Repetitive sequence transcripts in development

E. Davidson, J. Posakony, 1982, Nature.

Repetitive sequences of the sea urchin genome. II. Subfamily structure and evolutionary conservation.

R. Britten, E. Davidson, R. Scheller, 1981, Journal of molecular biology.

Repetitive sequences of the sea urchin genome. III. Nucleotide sequences of cloned repeat elements.

R. Britten, E. Davidson, R. Scheller, 1981, Journal of molecular biology.

Development of adult sensilla on the wing and notum of Drosophila melanogaster.

V. Hartenstein, J. Posakony, 1989, Development.

Correct Developmental and Tissue Specific Expression of a Cloned Alcohol Dehydrogenase Gene Introduced into the Drosophila Germ Line by P Element Transformation

T. Maniatis, D. Goldberg, J. Posakony, 1984 .

The Drosophila gene Hairless encodes a novel basic protein that controls alternative cell fates in adult sensory organ development.

A. Bang, J. Posakony, Anne G. Bang, 1992, Genes & development.

Discrete enhancer elements mediate selective responsiveness of enhancer of split complex genes to common transcriptional activators.

E. Lai, J. Posakony, D. T. Nellesen, 1999, Developmental biology.

Complex interplay of three transcription factors in controlling the tormogen differentiation program of Drosophila mechanoreceptors.

Steven W. Miller, J. Posakony, T. Avidor-Reiss, 2009, Developmental biology.

Default repression and Notch signaling: Hairless acts as an adaptor to recruit the corepressors Groucho and dCtBP to Suppressor of Hairless.

S. Barolo, A. Bang, J. Posakony, 2002, Genes & development.

A Notch-Independent Activity of Suppressor of Hairless Is Required for Normal Mechanoreceptor Physiology

S. Barolo, J. Posakony, R. G. Walker, 2000, Cell.

HairlessPromotes Stable Commitment to the Sensory Organ Precursor Cell Fate by Negatively Regulating the Activity of theNotchSignaling Pathway

A. Bang, J. Posakony, A. Bailey, 1995 .

The enhancer of split complex of Drosophila includes four Notch-regulated members of the bearded gene family.

E. Lai, J. Posakony, R. Bodner, 2000, Development.

An essential role for the Drosophila Pax2 homolog in the differentiation of adult sensory organs.

J. Posakony, H. Duan, W. Fu, 1999, Development.

The Drosophila gene Bearded encodes a novel small protein and shares 3' UTR sequence motifs with multiple Enhancer of split complex genes.

E. Lai, J. Posakony, J W Posakony, 1997, Development.

Role of Architecture in the Function and Specificity of Two Notch-Regulated Transcriptional Enhancer Modules

J. Posakony, F. Liu, Feng Liu, 2012, PLoS genetics.

transcriptional control by developmental cell signaling Three habits of highly effective signaling pathways: principles of

S. Barolo, J. Posakony, 2007 .

GFP and beta-galactosidase transformation vectors for promoter/enhancer analysis in Drosophila.

S. Barolo, J. Posakony, L. A. Carver, 2000, BioTechniques.

Sensillum development in the absence of cell division: the sensillum phenotype of the Drosophila mutant string.

V. Hartenstein, J. Posakony, 1990, Developmental biology.

New Drosophila transgenic reporters: insulated P-element vectors expressing fast-maturing RFP.

Scott Barolo, James W Posakony, S. Barolo, 2004, BioTechniques.

Identification of DNA sequences required for the regulation of Drosophila alcohol dehydrogenase gene expression.

T. Maniatis, J. Posakony, J. A. Fischer, 1985, Cold Spring Harbor symposia on quantitative biology.

Mitochondrial DNA sequences in the nuclear genome of Strongylocentrotus purpuratus.

R. Britten, E. Davidson, H. Jacobs, 1983, Journal of molecular biology.

Organization and expression of multiple actin genes in the sea urchin

R. Britten, E. Davidson, R. Scheller, 1981, Molecular and cellular biology.

Nucleotide sequence of a region of human mitochondrial DNA containing the precisely identified origin of replication

J. Posakony, S. Crews, G. Attardi, 1979, Nature.

The Drosophila extramacrochaetae protein antagonizes sequence-specific DNA binding by daughterless/achaete-scute protein complexes.

J. Posakony, H. Ellis, M. Doren, 1991, Development.

Spatial regulation of proneural gene activity: auto- and cross-activation of achaete is antagonized by extramacrochaetae.

P. A. Powell, J. Posakony, M. Doren, 1992, Genes & development.

GenePalette: a universal software tool for genome sequence visualization and analysis.

Mark Rebeiz, James W Posakony, J. Posakony, 2004, Developmental biology.

Sequence relationship between long and short repetitive DNA of the rat: a preliminary report.

W. Pearson, J. Posakony, J. Bonner, 1977, Proceedings of the National Academy of Sciences of the United States of America.

Direct downstream targets of proneural activators in the imaginal disc include genes involved in lateral inhibitory signaling.

A. Bang, J. Posakony, M. Leviten, 1994, Genes & development.

Identification of hunchback cis-regulatory DNA conferring temporal expression in neuroblasts and neurons.

J. Posakony, C. Doe, J. Margolis, 2012, Gene expression patterns : GEP.

Antagonism of notch signaling activity by members of a novel protein family encoded by the bearded and enhancer of split gene complexes.

E. Lai, J. Posakony, J. Kavaler, 2000, Development.

Transcripts of three mitochondrial genes in the RNA of sea urchin eggs and embryos.

R. Britten, E. Davidson, H. Jacobs, 1983, Developmental biology.

An enhancer composed of interlocking submodules controls transcriptional autoregulation of suppressor of hairless.

F. Liu, J. Posakony, Feng Liu, 2014, Developmental cell.

The Drosophila gene knirps-related is a member of the steroid-receptor gene superf amily

M. Mckeown, J. Posakony, R. Evans, 1988, Nature.

Evolutionary emergence of Hairless as a novel component of the Notch signaling pathway

Steven W. Miller, J. Posakony, Artem Movsesyan, 2019, eLife.

Interspersed sequence organization and developmental representation of cloned poly(A) RNAs from sea urchin eggs.

R. Britten, E. Davidson, J. Posakony, 1983, Journal of molecular biology.

Evolutionary conservation of repetitive sequence expression in sea urchin egg RNA's.

R. Britten, E. Davidson, J. Posakony, 1980, Science.

MATERNAL AND EMBRYONIC TRANSCRIPTS OF THE SEA URCHIN EMBRYO1

R. Britten, E. Davidson, J. Posakony, 1982 .

Both inhibition and activation of Notch signaling rely on a conserved Neuralized-binding motif in Bearded proteins and the Notch ligand Delta.

J. Posakony, J. Fontana, 2009, Developmental biology.

Regulation of Drosophila Neurogenesis byRNA:RNA Duplexes?

E. Lai, J. Posakony, 1998, Cell.

Notch regulates numb: integration of conditional and autonomous cell fate specification

Steven W. Miller, J. Posakony, M. Rebeiz, 2011, Development.

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Christopher D. Brown, Angela N. Brooks, Patrick E. Meyer, 2010, Science.

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Christopher D. Brown, Angela N. Brooks, Patrick E. Meyer, 2011 .

Hairless to recruit the corepressors Groucho and dCtBP to Suppressor of Default repression and Notch signaling : Hairless acts as an adaptor

S. Barolo, A. Bang, J. Posakony, 2002 .

A cis-regulatory map of the Drosophila genome

Christopher D. Brown, Parantu K. Shah, Steven W. Miller, 2011, Nature.

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Bradley I. Arshinoff, Benjamin W. Booth, J. Landolin, 2010, Science.

Upd/Jak/STAT signaling represses wg transcription to allow initiation of morphogenetic furrow in Drosophila eye development.

S. Barolo, J. Posakony, Po-Hao Chen, 2007, Developmental biology.

Identification of hunchback cis-regulatory DNA conferring temporal expression in neuroblasts and neurons.

J. Posakony, C. Doe, J. Margolis, 2012, Gene expression patterns : GEP.

Materials and Methods Som Text Figs. S1 to S23 Tables S1 to S7 Data Sets S1 to S17 High-flux Solar-driven Thermochemical Dissociation of Co 2 and H 2 O Using Nonstoichiometric Ceria

Steven W. Miller, Carolyn A. Morrison, Charles L. G. Comstock, 2022 .

Comparison of sea urchin and human mtDNA: evolutionary rearrangement.

R. Britten, E. Davidson, J. Posakony, 1983, Proceedings of the National Academy of Sciences of the United States of America.

Gain-of-function alleles of Bearded interfere with alternative cell fate decisions in Drosophila adult sensory organ development.

J. Posakony, M. Leviten, 1996, Developmental biology.

Neural precursor-specific expression of multiple Drosophila genes is driven by dual enhancer modules with overlapping function

Steven W. Miller, J. Posakony, Mark Rebeiz, 2014, Proceedings of the National Academy of Sciences.

A cis-regulatory map of the Drosophila genome

Christopher D. Brown, Parantu K. Shah, Steven W. Miller, 2011, Nature.