Marlon Stoeckius

发表

Large-scale simultaneous measurement of epitopes and transcriptomes in single cells

H. Swerdlow, R. Satija, Christoph Hafemeister, 2017, Nature Methods.

Comprehensive integration of single cell data

Christoph Hafemeister, Andrew Butler, Rahul Satija, 2018, bioRxiv.

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Bertrand Z. Yeung, William M. Mauck, R. Satija, 2018, Genome Biology.

Identification of microRNA Targets by Azra Krek

N. Rajewsky, Azra Krek, K. Rajewsky, 2009 .

Comprehensive Integration of Single-Cell Data

Paul J. Hoffman, William M. Mauck, R. Satija, 2018, Cell.

Large scale sorting of C. elegans embryos reveals the dynamics of small RNA expression

F. Piano, N. Rajewsky, T. Colombo, 2009, Nature Methods.

Tracing tumorigenesis in a solid tumor model at single-cell resolution

B. Obermayer, C. Kocks, N. Rajewsky, 2020, Nature Communications.

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells

Neville E. Sanjana, Eleni P. Mimitou, R. Satija, 2019, Nature Methods.

Genome wide analysis of 3′ UTR sequence elements and proteins regulating mRNA stability during maternal-to-zygotic transition in zebrafish

Charles E. Vejnar, Saeed Tavazoie, A. Giraldez, 2019, Genome research.

A post-transcriptional regulatory code for mRNA stability during the zebrafish maternal-to-zygotic transition

Charles E. Vejnar, Mario Abdel Messih, Saeed Tavazoie, 2018, bioRxiv.

The functional and phenotypic diversity of single T-cell infiltrates in human colorectal cancer as correlated with clinical outcome

Peter Smibert, Marlon Stoeckius, P. Sims, 2020 .

Expanding the CITE-seq tool-kit: Detection of proteins, transcriptomes, clonotypes and CRISPR perturbations with multiplexing, in a single assay

Neville E. Sanjana, Eleni P. Mimitou, R. Satija, 2018, bioRxiv.

Single-cell stabilization method identifies gonadotrope transcriptional dynamics and pituitary cell type heterogeneity

H. Swerdlow, S. Sealfon, Yongchao Ge, 2018, Nucleic acids research.

Global characterization of the oocyte‐to‐embryo transition in Caenorhabditis elegans uncovers a novel mRNA clearance mechanism

F. Piano, Salah Ayoub, N. Rajewsky, 2014, The EMBO journal.

A RORγt+ cell instructs gut microbiota-specific Treg cell differentiation

Mark S. Anderson, Ansuman T. Satpathy, C. Lareau, 2022, Nature.

Essential Roles of Raf/Extracellular Signal-regulated Kinase/Mitogen-activated Protein Kinase Pathway, YY1, and Ca2+ Influx in Growth Arrest of Human Vascular Smooth Muscle Cells by Bilirubin*

Marlon Stoeckius, F. Sellke, A. Usheva, 2012, The Journal of Biological Chemistry.

Intratumor heterogeneity and T cell exhaustion in primary CNS lymphoma

G. Lenz, W. Stummer, Marlon Stoeckius, 2022, Genome Medicine.

Integrated analysis of multimodal single-cell data

Raphael Gottardo, Avi Srivastava, Yuhan Hao, 2020, Cell.

Paternal RNA contributions in the Caenorhabditis elegans zygote

N. Rajewsky, Marlon Stoeckius, Dominic Grün, 2014, The EMBO journal.

Select microRNAs are essential for early development in the sea urchin.

N. Rajewsky, M. Friedländer, J. Maaskola, 2012, Developmental biology.

Antigen presentation by type 3 innate lymphoid cells instructs the differentiation of gut microbiota-specific regulatory T cells

Mark S. Anderson, Marlon Stoeckius, P. Allen, 2021 .

Cell “hashing” with barcoded antibodies enables multiplexing and doublet detection for single cell genomics

Shiwei Zheng, Rahul Satija, Peter Smibert, 2017, bioRxiv.

Paternal Diet Defines Offspring Chromatin State and Intergenerational Obesity

P. Itskov, N. Rajewsky, Nicola Iovino, 2014, Cell.

Clonal lineage tracing reveals shared origin of conventional and plasmacytoid dendritic cells.

Joseph N. Pucella, Peter Smibert, A. Tsirigos, 2022, Immunity.

Conservation of mRNA and protein expression during development of C. elegans.

N. Rajewsky, M. Selbach, Nadine Thierfelder, 2014, Cell reports.

Single Cell Analysis of Blood Mononuclear Cells Stimulated Through Either LPS or Anti-CD3 and Anti-CD28

V. Pascual, J. Banchereau, Peter Smibert, 2021, Frontiers in Immunology.

Large-scale simultaneous measurement of epitopes and transcriptomes in single cells

H. Swerdlow, R. Satija, Christoph Hafemeister, 2017, bioRxiv.

In vivo and transcriptome-wide identification of RNA binding protein target sites.

Dominic Grün, Nikolaus Rajewsky, Marlon Stoeckius, 2011, Molecular cell.

Tracing tumorigenesis in a solid tumor model at single-cell resolution

B. Obermayer, C. Kocks, N. Rajewsky, 2020, Nature Communications.

Integration of whole transcriptome spatial profiling with protein markers

D. Landau, Marlon Stoeckius, Xiang Niu, 2023, Nature Biotechnology.

Caenorhabditis elegans is one of the most elegant model organisms

Marlon Stoeckius, 2012 .

Integrated protein and transcriptome high-throughput spatial profiling

D. Landau, Marlon Stoeckius, N. Ben-Chetrit, 2022, bioRxiv.

Single cell analysis of blood mononuclear cells stimulated through CD3 and CD28 shows collateral activation of B and NK cells and demise of monocytes

V. Pascual, J. Banchereau, Peter Smibert, 2020, bioRxiv.

Multiplexed single-cell analysis reveals prognostic and nonprognostic T cell types in human colorectal cancer

Peter Smibert, Marlon Stoeckius, P. Sims, 2022, JCI insight.

Select Micrornas Are Essential for Early Development in the Sea Urchin Nih Public Access Author Manuscript

N. Rajewsky, J. Maaskola, Marlon Stoeckius, 2022 .

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells

Neville E. Sanjana, Eleni P. Mimitou, R. Satija, 2019, Nature Methods.

Large-scale simultaneous measurement of epitopes and transcriptomes in single cells

H. Swerdlow, R. Satija, Christoph Hafemeister, 2017, bioRxiv.