Mary E. Choi

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Induction of Apoptosis by Particulate Matter: Role of Tnf-␣ and Mapk

B. Y. Chin, Mary E. Choi, M. Burdick, 2022 .

Guidelines for the use and interpretation of assays for monitoring autophagy

Robert Clarke, Hong Jiang, Hiroyuki Ishida, 2012 .

Guidelines for the use and interpretation of assays formonitoring autophagy (3rd edition)

Sangeeta Khare, Xin Qi, Ying Wang, 2016 .

TGF-β1 Protects against Mesangial Cell Apoptosis via Induction of Autophagy*

Yan Ding, Jin Kuk Kim, Mary E. Choi, 2010, The Journal of Biological Chemistry.

Therapeutic targets for treating fibrotic kidney diseases.

Mary E. Choi, S. I. Kim, Soyoung Lee, 2015, Translational research : the journal of laboratory and clinical medicine.

Amelioration of Diabetic Nephropathy Using a Retinoic Acid Receptor β2 Agonist

Mary E. Choi, L. Gudas, M. Shevchuk, 2018, The Journal of Pharmacology and Experimental Therapeutics.

A Pilot Study Linking Endothelial Injury in Lungs and Kidneys in Chronic Obstructive Pulmonary Disease

Vanesa Bijol, Bartolome R. Celli, B. Celli, 2017, American journal of respiratory and critical care medicine.

Autophagy in major human diseases

A. Ballabio, Nektarios Tavernarakis, D. Green, 2021, The EMBO journal.

Interleukin-6 Contributes to the Development of Anemia in Juvenile CKD

S. Rivella, Mary E. Choi, Yuan-Shan Zhu, 2018, Kidney international reports.

Autophagy in kidney health and disease.

Mary E. Choi, Zhibo Wang, 2014, Antioxidants & redox signaling.

TGF-beta1 stimulates HO-1 via the p38 mitogen-activated protein kinase in A549 pulmonary epithelial cells.

Mary E. Choi, A. Choi, W. Ning, 2002, American journal of physiology. Lung cellular and molecular physiology.

Mitogen-activated protein kinase pathway mediates hyperoxia-induced apoptosis in cultured macrophage cells.

B. Y. Chin, Mary E. Choi, A. Choi, 1999, American journal of physiology. Lung cellular and molecular physiology.

Stimulation of cyclooxygenase-2 expression by bone-derived transforming growth factor-beta enhances bone metastases in breast cancer.

Mary E. Choi, T. Yoneda, H. Yoshikawa, 2006, Cancer research.

Mitophagy dependent macrophage reprogramming protects against kidney fibrosis.

T. Muthukumar, Mary E. Choi, K. Nakahira, 2019, JCI insight.

HIV protease inhibitor-induced cardiac dysfunction and fibrosis is mediated by platelet-derived TGF-β1 and can be suppressed by exogenous carbon monoxide

R. Varshney, Mary E. Choi, Shahrouz Ghafoory, 2017, PloS one.

Urinary biomarkers for early diabetic nephropathy: beyond albuminuria

Mary E. Choi, So-Young Lee, 2015, Pediatric Nephrology.

Stimulation of pro-α1(I) collagen by TGF-β1 in mesangial cells: role of the p38 MAPK pathway

B. Y. Chin, Mary E. Choi, A. Choi, 2001 .

Mechanism of transforming growth factor-β1 signaling: Role of the mitogen-activated protein kinase

Mary E. Choi, 2000 .

Cloning and characterization of a naturally occurring soluble form of TGF- (cid:98) type I receptor

Mary E. Choi, 1998 .

Mitochondrial Dysfunction as a Pathogenic Mediator of Chronic Obstructive Pulmonary Disease and Idiopathic Pulmonary Fibrosis

F. Martinez, S. Ryter, Mary E. Choi, 2018, Annals of the American Thoracic Society.

Autophagy: A Lysosome-Dependent Process with Implications in Cellular Redox Homeostasis and Human Disease.

S. Ryter, Mary E. Choi, D. Bhatia, 2018, Antioxidants & redox signaling.

REIN on obesity, proteinuria and CKD.

Mary E. Choi, 2011, Journal of the American Society of Nephrology : JASN.

Autophagy regulates TGF-β expression and suppresses kidney fibrosis induced by unilateral ureteral obstruction.

Mary E. Choi, Yan Ding, Soyoung Lee, 2014, Journal of the American Society of Nephrology : JASN.

Urine Cell-Free Mitochondrial DNA as a Marker of Weight Loss and Body Composition in Older Adults With HIV

E. Siegler, Mary E. Choi, Yuan-Shan Zhu, 2021, Journal of acquired immune deficiency syndromes.

HIV protease inhibitor ritonavir induces renal fibrosis and dysfunction: role of platelet-derived TGF-β1 and intervention via anti-oxidant pathways.

R. Varshney, Mary E. Choi, K. Fung, 2020, AIDS.

The not-so-sweet side of fructose.

Mary E. Choi, 2009, Journal of the American Society of Nephrology : JASN.

Cytokine signatures of end organ injury in COVID-19

A. Borczuk, Mary E. Choi, E. Schenck, 2020, Scientific Reports.

Autophagy: Friend or Foe in Lung Disease?

S. Ryter, Mary E. Choi, K. Nakahira, 2016, Annals of the American Thoracic Society.

Necroptosis: a crucial pathogenic mediator of human disease.

S. Ryter, Mary E. Choi, A. Choi, 2019, JCI insight.

Autophagy in Kidney Disease.

Mary E. Choi, 2020, Annual review of physiology.

Effect of Neutropenic Critical Illness on Development and Prognosis of Acute Respiratory Distress Syndrome.

Mary E. Choi, E. Schenck, A. Choi, 2020, American journal of respiratory and critical care medicine.

Transforming growth factor-β1-mediated cardiac fibrosis: potential role in HIV and HIV/antiretroviral therapy-linked cardiovascular disease.

Mary E. Choi, J. Laurence, J. Ahamed, 2016, AIDS.

Molecular determinants of nephron vascular specialization in the kidney

S. Rafii, T. Muthukumar, Mary E. Choi, 2019, Nature Communications.

Stimulation of proa 1 ( I ) collagen by TGF-b 1 in mesangial cells : role of the p 38 MAPK pathway

Mary E. Choi, A. Choi, A. Mohsenin, 2001 .

Autophagy in chronic lung disease.

Mary E. Choi, A. Choi, A. Racanelli, 2020, Progress in molecular biology and translational science.

Cecal ligation and puncture-induced sepsis as a model to study autophagy in mice.

S. Ryter, Mary E. Choi, A. Choi, 2014, Journal of visualized experiments : JoVE.

Mitochondrial dysfunction in kidney injury, inflammation, and disease: potential therapeutic approaches

Mary E. Choi, D. Bhatia, A. Capili, 2020, Kidney research and clinical practice.

The Emerging Role of Mitophagy in Kidney Diseases.

Mary E. Choi, D. Bhatia, 2019, Journal of life sciences.

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1

Mark R. Marten, Erinna F. Lee, Dana L. Miller, 2021, Autophagy.

COVID-19 in Patients with CKD in New York City.

Mary E. Choi, P. Goyal, M. Greenbaum, 2020, Kidney360.

Multi-omic comparative analysis of COVID-19 and bacterial sepsis-induced ARDS

K. Suhre, Mary E. Choi, R. Batra, 2022, medRxiv.

Caveolin-1 expression by means of p38beta mitogen-activated protein kinase mediates the antiproliferative effect of carbon monoxide.

S. Ryter, Mary E. Choi, A. Choi, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Lyme disease-associated glomerulonephritis.

Mary E. Choi, H. Rennke, V. Bijol, 2011, Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association.

Novel Roles of Necroptosis Mediator Receptor-Interacting Protein Kinase 3 in Kidney Injury

Mary E. Choi, R. Uni, 2021, Nephron.

Stimulation of pro-a1(I) collagen by TGF-b1 in mesangial cells: role of the p38 MAPK pathway

Mary E. Choi, A. Choi, A. Mohsenin, 2001 .

TGF-beta-activated kinase 1 and TAK1-binding protein 1 cooperate to mediate TGF-beta1-induced MKK3-p38 MAPK activation and stimulation of type I collagen.

Mary E. Choi, J. Kwak, S. I. Kim, 2007, American journal of physiology. Renal physiology.

TGF-β-activated kinase 1 is crucial in podocyte differentiation and glomerular capillary formation.

Jiwang Zhang, Mary E. Choi, Yan Ding, 2014, Journal of the American Society of Nephrology : JASN.

A Pilot Study Linking Endothelial Injury in Lungs and Kidneys in COPD

B. Celli, Mary E. Choi, V. Pinto-Plata, 2016 .

Conditional deletion of myeloid-specific mitofusin 2 but not mitofusin 1 promotes kidney fibrosis.

T. Muthukumar, Mary E. Choi, K. Nakahira, 2022, Kidney international.

Transforming growth factor-beta1 stimulates vascular endothelial growth factor 164 via mitogen-activated protein kinase kinase 3-p38alpha and p38delta mitogen-activated protein kinase-dependent pathway in murine mesangial cells.

Mary E. Choi, J. Kwak, S. I. Kim, 2004, The Journal of biological chemistry.

Iron therapy mitigates chronic kidney disease progression by regulating intracellular iron status of kidney macrophages

Mary E. Choi, F. Vinchi, D. Bhatia, 2022, JCI insight.

Cigarette smoke-initiated autoimmunity facilitates sensitisation to elastin-induced COPD-like pathologies in mice

M. Zhang, Mary E. Choi, A. Choi, 2020, European Respiratory Journal.

Autophagy in kidney disease: Advances and therapeutic potential.

Mary E. Choi, D. Bhatia, 2020, Progress in molecular biology and translational science.

Regulation of autophagy by TGF-β: emerging role in kidney fibrosis.

Mary E. Choi, Yan Ding, 2014, Seminars in nephrology.

RIPK3 promotes kidney fibrosis via AKT-dependent ATP citrate lyase.

S. Ryter, T. Muthukumar, Mary E. Choi, 2018, JCI insight.

Oxidative stress and autophagy: Crucial modulators of kidney injury

S. Ryter, Mary E. Choi, A. Sureshbabu, 2015, Redox biology.

Autophagy in diabetic nephropathy.

Mary E. Choi, Yan Ding, 2014, The Journal of endocrinology.

TGF-β signaling via TAK1 pathway: role in kidney fibrosis.

Mary E. Choi, Yan Ding, S. I. Kim, 2012, Seminars in nephrology.

TGF-β-activated kinase-1: New insights into the mechanism of TGF-β signaling and kidney disease

Mary E. Choi, S. I. Kim, 2012, Kidney research and clinical practice.

BAT3 Interacts with Transforming Growth Factor-β (TGF-β) Receptors and Enhances TGF-β1-induced Type I Collagen Expression in Mesangial Cells*

Mary E. Choi, J. Kwak, S. I. Kim, 2008, Journal of Biological Chemistry.

TGF-β1 stimulates HO-1 via the p38 mitogen-activated protein kinase in A549 pulmonary epithelial cells

Mary E. Choi, A. Choi, W. Ning, 2002 .

Tgf-b-activated Kinase-1: New Insights into the Mechanism of Tgf-b Signaling and Kidney Disease Kidney Research and Clinical Practice

Mary E. Choi, S. I. Kim, 2022 .

Angiopoietin 2 Is Associated with Vascular Necroptosis Induction in Coronavirus Disease 2019 Acute Respiratory Distress Syndrome

S. Rafii, A. Borczuk, Mary E. Choi, 2022, The American Journal of Pathology.

Mitofusins regulate lipid metabolism to mediate the development of lung fibrosis

Mary E. Choi, K. Nakahira, A. Choi, 2019, Nature Communications.

TGF-β signaling in the kidney: profibrotic and protective effects.

Mary E. Choi, S. Muhsin, A. Sureshbabu, 2016, American journal of physiology. Renal physiology.

Autophagy Promotes Intracellular Degradation of Type I Collagen Induced by Transforming Growth Factor (TGF)-β1*

Mary E. Choi, Yan Ding, S. I. Kim, 2012, Journal of Biological Chemistry.

Transforming Growth Factor-β1 Stimulates Vascular Endothelial Growth Factor 164 via Mitogen-activated Protein Kinase Kinase 3-p38α and p38δ Mitogen-activated Protein Kinase-dependent Pathway in Murine Mesangial Cells*

Mary E. Choi, J. Kwak, S. I. Kim, 2004, Journal of Biological Chemistry.

Protective effects of low-dose carbon monoxide against renal fibrosis induced by unilateral ureteral obstruction.

Mary E. Choi, J. Kwak, S. I. Kim, 2008, American journal of physiology. Renal physiology.

Requirement of Mitogen-activated Protein Kinase Kinase 3 (MKK3) for Activation of p38α and p38δ MAPK Isoforms by TGF-β1 in Murine Mesangial Cells*

Mary E. Choi, R. Flavell, R. Ma, 2002, The Journal of Biological Chemistry.

Rat mesangial cell hypertrophy in response to transforming growth factor-β1

Mary E. Choi, B. Ballermann, Eung-Gook Kim, 1993 .

Protein Phosphatase 2A Is a Negative Regulator of Transforming Growth Factor-β1-induced TAK1 Activation in Mesangial Cells*

Mary E. Choi, J. Kwak, S. I. Kim, 2008, Journal of Biological Chemistry.

Carbonyl iron and iron dextran therapies cause adverse effects on bone health in juveniles with chronic kidney disease.

S. Rivella, Mary E. Choi, S. Doty, 2020, Kidney international.

RIPK3 promotes sepsis-induced acute kidney injury via mitochondrial dysfunction.

S. Ryter, T. Muthukumar, Mary E. Choi, 2018, JCI insight.

Beclin-1 regulates cigarette smoke-induced kidney injury in a murine model of chronic obstructive pulmonary disease.

S. Ryter, Mary E. Choi, E. Finkelsztein, 2018, JCI insight.

Impaired oxidative phosphorylation regulates necroptosis in human lung epithelial cells.

S. Ryter, Mary E. Choi, A. Choi, 2015, Biochemical and biophysical research communications.

Association of urine mitochondrial DNA with clinical measures of COPD in the SPIROMICS cohort.

J. Curtis, R. Bowler, F. Martinez, 2020, JCI insight.

Association of plasma mitochondrial DNA with COPD severity and progression in the SPIROMICS cohort

J. Curtis, R. Bowler, F. Martinez, 2021, Respiratory Research.

Integrative metabolomic and proteomic signatures define clinical outcomes in severe COVID-19

K. Suhre, Mary E. Choi, R. Batra, 2021, iScience.

Lack of hepcidin ameliorates anemia and improves growth in an adenine-induced mouse model of chronic kidney disease.

S. Rivella, Mary E. Choi, A. Boskey, 2016, American journal of physiology. Renal physiology.

Transforming Growth Factor-β (TGF-β1) Activates TAK1 via TAB1-mediated Autophosphorylation, Independent of TGF-β Receptor Kinase Activity in Mesangial Cells*

Mary E. Choi, Yan Ding, J. Kwak, 2009, The Journal of Biological Chemistry.

Erratum to: Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition) (Autophagy, 12, 1, 1-222, 10.1080/15548627.2015.1100356

Sara W. Bird, Erinna F. Lee, Michael D. Kim, 2016 .

Erratum: Caveolin-1 expression by means of p38β mitogen-activated protein kinase mediates the antiproliferative effect of carbon monoxide (Proceedings of the National Academy of Sciences of the United States of America (August 9, 2005) 102, 32 (11319-11324))

S. Ryter, Mary E. Choi, A. Choi, 2005 .

Characteristics of Acute Kidney Injury in Hospitalized COVID-19 Patients in an Urban Academic Medical Center.

M. Suthanthiran, Mary E. Choi, Yiye Zhang, 2020, Clinical journal of the American Society of Nephrology : CJASN.

Mitogen-activated protein kinase pathway mediates hyperoxia-induced apoptosis in cultured macrophage cells.

Mary E. Choi, A. Choi, I. Petrache, 1999, American journal of physiology. Lung cellular and molecular physiology.

Autophagy regulates TGF-β expression and suppresses kidney fibrosis induced by unilateral ureteral obstruction.

Mary E. Choi, Yan Ding, Zhibo Wang, 2014, Journal of the American Society of Nephrology : JASN.

Autophagy Promotes Intracellular Degradation of Type I Collagen Induced by Transforming Growth Factor (TGF)-β1*

Mary E. Choi, Yan Ding, S. I. Kim, 2012, The Journal of Biological Chemistry.

Caveolin-1 expression by means of p38β mitogen-activated protein kinase mediates the antiproliferative effect of carbon monoxide

S. Ryter, Mary E. Choi, A. Choi, 2005 .

Transforming growth factor-beta (TGF-beta1) activates TAK1 via TAB1-mediated autophosphorylation, independent of TGF-beta receptor kinase activity in mesangial cells.

Mary E. Choi, Yan Ding, J. Kwak, 2009, The Journal of biological chemistry.