Xiaoyu Chen

发表

Diversity and Complexity in DNA Recognition by Transcription Factors

Daniel E. Newburger, Esther T. Chan, Andrew R. Gehrke, 2009, Science.

Global mapping of protein-DNA interactions in vivo by digital genomic footprinting

William Stafford Noble, Shane J. Neph, Alex P. Reynolds, 2009, Nature Methods.

A dynamic Bayesian network for identifying protein-binding footprints from single molecule-based sequencing data

Jeff A. Bilmes, Xiaoyu Chen, William Stafford Noble, 2010, Bioinform..

Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression

F. Robert, M. Blanchette, B. Coulombe, 2006 .

Comparative assessment of methods for aligning multiple genome sequences

Xiaoyu Chen, Martin Tompa, M. Tompa, 2010, Nature Biotechnology.

Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees

Xiaoyu Chen, Mathieu Blanchette, M. Blanchette, 2007, BMC Bioinformatics.

RankMotif++: a motif-search algorithm that accounts for relative ranks of K-mers in binding transcription factors

Xiaoyu Chen, Quaid Morris, Timothy R. Hughes, 2007, ISMB/ECCB.

Diversity and Complexity in DNA Recognition by Transcription Factors

Daniel E. Newburger, Esther T. Chan, Andrew R. Gehrke, 2009, Science.

Genome-wide computational prediction of transcriptional regulatory modules reveals new insights into human gene expression.

F. Robert, M. Blanchette, B. Coulombe, 2006, Genome research.