I. Sarkar

发表

Translational bioinformatics: linking knowledge across biological and clinical realms

Lucila Ohno-Machado, Atul J. Butte, Yves A. Lussier, 2011, J. Am. Medical Informatics Assoc..

Biomedical informatics and translational medicine

I. Sarkar, 2010, Journal of Translational Medicine.

Standardizing Clinical Document Names Using the HL7/LOINC Document Ontology and LOINC Codes.

Elizabeth S. Chen, G. Melton, I. Sarkar, 2010, AMIA ... Annual Symposium proceedings. AMIA Symposium.

Towards Structuring Unstructured GenBank Metadata for Enhancing Comparative Biological Studies

Elizabeth S. Chen, Indra Neil Sarkar, I. Sarkar, 2011, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Viewpoint 2 – Confluence of Multiple Disciplines – Converging Sciences

A. Hasman, C. Lovis, H. Dickhaus, 2017 .

Biomedical Informatics – A Confluence of Disciplines?

C Lovis, A Hasman, P Knaup, 2011, Methods of Information in Medicine.

Identifying Plant-Human Disease Associations in Biomedical Literature: A Case Study

I. Sarkar, Vivekanand Sharma, W. Law, 2016, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Identifying Supplement Use Within Clinical Notes: An Applicationof Natural Language Processing

I. Sarkar, Vivekanand Sharma, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Challenges in Identification of Potential Phytotherapies from Contemporary Biomedical Literature

I. Sarkar, 2015 .

GenBank and PubMed: How connected are they?

Catherine N. Norton, Indra Neil Sarkar, Holly Miller, 2008, BMC Research Notes.

Managing Interoperability & Complexity in Health Systems

I. Sarkar, C. Tao, Matt-Mouley Bouamrane, 2011 .

Biodiversity informatics: organizing and linking information across the spectrum of life

Indra Neil Sarkar, I. Sarkar, 2007, Briefings Bioinform..

Identifying Herbal Adverse Events From Spontaneous Reporting Systems Using Taxonomic Name Resolution Approach

I. Sarkar, Vivekanand Sharma, L. F. F. Gelin, 2020, Bioinformatics and biology insights.

At the Intersection of Public-health Informatics and Bioinformatics: Using Advanced Web Technologies for Phylogeography

Cynthia Brandt, Matthew Scotch, Indra Neil Sarkar, 2010, Epidemiology.

Exploring historical trends using taxonomic name metadata

Catherine N. Norton, Indra Neil Sarkar, Ryan Schenk, 2007, BMC Evolutionary Biology.

Reimagining the research-practice relationship: policy recommendations for informatics-enabled evidence-generation across the US health system

C. Friedman, R. Richesson, P. Embí, 2019, JAMIA open.

DNA barcoding using chitons (genus Mopalia)

Indra Neil Sarkar, Rob DeSalle, R. DeSalle, 2007 .

Origins of amyloid-β

I. Sarkar, W. G. Tharp, 2013, BMC Genomics.

The mega‐matrix tree of life: using genome‐scale horizontal gene transfer and sequence evolution data as information about the vertical history of life

R. DeSalle, J. Rosenfeld, I. Sarkar, 2011, Cladistics : the international journal of the Willi Hennig Society.

Genome-wide search for leech antiplatelet proteins in the non-blood-feeding leech Helobdella robusta (Rhyncobdellida: Glossiphoniidae) reveals evidence of secreted anticoagulants

M. Siddall, I. Sarkar, S. Kvist, 2011 .

Appearance of new tetraspanin genes during vertebrate evolution.

R. DeSalle, T. Sun, I. Sarkar, 2008, Genomics.

L IN KIN G B IOM E D IC A L L A N GU A GE IN F OR M A T ION A N D KN OWL

M. Cantor, Y. Lussier, I. Sarkar, 2002 .

Development of a Comprehensive Family Health History Information Model

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2013, AMIA.

Mining and Visualizing Sequential Patterns in the Electronic Health Record: A Case Study for Asthma With and Without Mental Disorders

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2016, AMIA.

Comorbidity Miner: An Open Source Interactive Tool for Mining Disparate Electronic Health Data Sources

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2017, AMIA.

Bringing Genome Tests into Clinical Practice

I. Sarkar, 2013, Yearbook of Medical Informatics.

A Phylogenetic Approach to Analyze the Conservativeness of BRCA1 and BRCA2 Mutations

I. Sarkar, Jiaying Lai, 2020, AMIA.

Characteristic attributes in cancer microarrays

Indra Neil Sarkar, S. E. Stanley, Robert DeSalle, 2002, Journal of Biomedical Informatics.

Curated multiple sequence alignment for the Adenomatous Polyposis Coli (APC) gene and accuracy of in silico pathogenicity predictions

I. Sarkar, M. Greenblatt, T. Pesaran, 2019, bioRxiv.

A Cross-Species Analysis of Animal Models for the Investigation of Preterm Birth Mechanisms

L. Donahue, I. Sarkar, B. Pearce, 2016, Reproductive Sciences.

Towards the Standardized Documentation of E-Cigarette Use in the Electronic Health Record for Population Health Surveillance and Research

G. Melton, I. Sarkar, E. Chen, 2015, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Predicting Thromboembolism after Vaginal and Laparoscopic Hysterectomy in Gynecologic Oncology Patients using Machine Learning

Michael Cohen, Elizabeth S. Chen, Indra Neil Sarkar, 2018, American Medical Informatics Association Annual Symposium.

Predicting the Costs of Medical Liability Using Artificial Neural Networks

Elizabeth S. Chen, Indra Neil Sarkar, Dilum P. Aluthge, 2018, AMIA.

Exploring Complex Disease Gene Relationships Using Simultaneous Analysis

Joseph D. Romano, I. Sarkar, W. G. Tharp, 2014 .

Access to community-based reproductive health services and incidence of low birthweight delivery among refugee and displaced mothers: a retrospective study in the Thailand-Myanmar border region

I. Sarkar, C. Maung, Sudheesha Perera, 2022, BMJ Open.

Machine Learning Offers Exciting Potential for Predicting Postprocedural Outcomes: A Framework for Developing Random Forest Models in IR.

I. Sarkar, E. Chen, S. Ahn, 2020, Journal of vascular and interventional radiology : JVIR.

Prevention of treatment-related fluid overload reduces estimated effective cost of prothrombin complex concentrate in patients requiring rapid vitamin K antagonist reversal

J. Petrozzino, I. Sarkar, M. Fung, 2016, Expert review of pharmacoeconomics & outcomes research.

Research Strategies for Biomedical and Health Informatics Some Thought-provoking and Critical Proposals to Encourage Scientific Debate on the Nature of Good Research in Medical Informatics

S. Bakken, S. Koch, A. McCray, 2017 .

Comparing Global with Disease specific Machine-learned Readmission Prediction Models

M. Littman, I. Sarkar, L. Mercurio, 2020 .

I. Sarkar, L. Brick, J. Alber, 2022, Journal of neuroimaging : official journal of the American Society of Neuroimaging.

E-Consult Protocoling to Improve the Quality of Cardiac Stress Tests.

Nishant R. Shah, I. Sarkar, A. Morrison, 2020, JACC. Cardiovascular imaging.

Transforming Health Data to Actionable Information: Recent Progress and Future Opportunities in Health Information Exchange

I. Sarkar, 2022, Yearbook of Medical Informatics.

Statewide evaluation of COVID-19 vaccine hesitancy in Rhode Island

I. Sarkar, P. Chan, B. Rogers, 2022, PloS one.

Origins of amyloid-β

I. Sarkar, W. G. Tharp, 2013, BMC Genomics.

A Computational Approach for Identifying Plant-Based Foods for Addressing Vitamin Deficiency Diseases

Christina Y. Yu, I. Sarkar, 2015 .

Drug repurposing: mining protozoan proteomes for targets of known bioactive compounds

Indra Neil Sarkar, Adam Sateriale, Kovi Bessoff, 2014, J. Am. Medical Informatics Assoc..

Discussion of “The New Role of Biomedical Informatics in the Age of Digital Medicine”

Victor Maojo, Nigel H Lovell, Hyeoun-Ae Park, 2016, Methods of Information in Medicine.

Geospatial and Temporal Analysis of Thyroid Cancer Incidence in a Rural Population.

L. Morrissey, I. Sarkar, D. Rizzo, 2015, Thyroid : official journal of the American Thyroid Association.

Bioinformatics opportunities for identification and study of medicinal plants

Indra Neil Sarkar, Vivekanand Sharma, I. Sarkar, 2013, Briefings Bioinform..

Identifying Complementary and Alternative Medicine Usage Information from Internet Resources

John H Holmes, Vivekanand Sharma, Indra N Sarkar, 2016, Methods of Information in Medicine.

Solr-Plant: efficient extraction of plant names from text

Indra Neil Sarkar, Vivekanand Sharma, Maria Isabel Restrepo, 2019, BMC Bioinformatics.

The impact of taxon sampling on phylogenetic inference: a review of two decades of controversy

Indra Neil Sarkar, Ahmed Ragab Nabhan, I. Sarkar, 2012, Briefings Bioinform..

LYRUS: a machine learning model for predicting the pathogenicity of missense variants

Ece D. Gamsiz Uzun, B. Rubenstein, I. Sarkar, 2021, bioRxiv.

Genetic variation and phylogeny of the cosmopolitan marine genus Tubificoides (Annelida: Clitellata: Naididae: Tubificinae).

I. Sarkar, C. Erséus, S. Kvist, 2010, Molecular phylogenetics and evolution.

Systematic analysis of DNA microarray data: ordering and interpreting patterns of gene expression.

I N Sarkar, R DeSalle, M Siddall, 2001, Genome research.

Interpreting Patterns of Gene Expression Systematic Analysis of DNA Microarray Data : Ordering and References

Indra Neil Sarkar, Rob DeSalle, Paul J. Planet, 2001 .

Leveraging biomedical ontologies and annotation services to organize microbiome data from Mammalian hosts.

Indra Neil Sarkar, I. Sarkar, 2010, AMIA ... Annual Symposium proceedings. AMIA Symposium.

The phylogeny of rodent malaria parasites: simultaneous analysis across three genomes.

R. Carter, I. Sarkar, S. Perkins, 2007, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

caos software for use in character‐based DNA barcoding

Indra Neil Sarkar, R. DeSalle, I. Sarkar, 2008, Molecular ecology resources.

An automated phylogenetic key for classifying homeoboxes

Rob DeSalle, Bernd Schierwater, Joseph W Thornton, 2002 .

Salivary Transcriptome of the North American Medicinal Leech, Macrobdella decora

M. Siddall, I. Sarkar, G. Min, 2010, The Journal of parasitology.

A Novel Machine Learning Model Developed to Assist in Patient Selection for Outpatient Total Shoulder Arthroplasty.

Dustin R. Biron, Alan H. Daniels, I. Sarkar, 2019, The Journal of the American Academy of Orthopaedic Surgeons.

OrthologID: automation of genome-scale ortholog identification within a parsimony framework

Gloria M. Coruzzi, Indra Neil Sarkar, Mary G. Egan, 2006, Bioinform..

An integrative model for in-silico clinical-genomics discovery science

Yves A. Lussier, Indra Neil Sarkar, Michael Cantor, 2002, AMIA.

Examining the Use, Contents, and Quality of Free-Text Tobacco Use Documentation in the Electronic Health Record

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2014, AMIA.

INTERNATIONAL CONFERENCE ON INTELLIGENT SYSTEMS FOR MOLECULAR BIOLOGY (ISMB)

Kai Wang, Elon Portugaly, Miao Zhang, 2009 .

Predicting Mortality in Diabetic ICU Patients Using Machine Learning and Severity Indices

Elizabeth S. Chen, Indra Neil Sarkar, Paul Stey, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Translational Bioinformatics: Bridging the Biological and Clinical Divide

Indra Neil Sarkar, I. Sarkar, 2013 .

Linking biomedical language information and knowledge resources: GO and UMLS.

I N Sarkar, Y A Lussier, M N Cantor, 2002, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing.

Linking Biomedical Language Information and Knowledge Resources in the 21st Century: GO and UMLS

Yves A. Lussier, Indra Neil Sarkar, Michael N. Cantor, 2003, Pacific Symposium on Biocomputing.

An Evaluation of Hybrid Methods for Matching Biomedical Terminologies: Mapping the Gene Ontology to the UMLS®$

Olivier Bodenreider, Yves A. Lussier, Indra Neil Sarkar, 2003, MIE.

Literature Based Discovery of Gene Clusters Using Phylogenetic Methods

Indra Neil Sarkar, Abha Agrawal, I. Sarkar, 2006, AMIA.

Automated simultaneous analysis phylogenetics (ASAP): an enabling tool for phlyogenomics

Gloria M. Coruzzi, Indra Neil Sarkar, Mary G. Egan, 2008, BMC Bioinformatics.

mILD: a tool for constructing and analyzing matrices of pairwise phylogenetic character incongruence tests

Indra Neil Sarkar, Paul J. Planet, I. Sarkar, 2005, Bioinform..

Adapting simultaneous analysis phylogenomic techniques to study complex disease gene relationships

Indra Neil Sarkar, Joseph D. Romano, William G. Tharp, 2015, J. Biomed. Informatics.

Data Analysis and Data Mining: Current Issues in Biomedical Informatics

A Ziegler, R Bellazzi, A T McCray, 2011, Methods of Information in Medicine.

PubMedMiner: Mining and Visualizing MeSH-based Associations in PubMed

Elizabeth S. Chen, Indra Neil Sarkar, Yucan Zhang, 2014, AMIA.

Leveraging concept-based approaches to identify potential phyto-therapies

Indra Neil Sarkar, Vivekanand Sharma, I. Sarkar, 2013, J. Biomed. Informatics.

Using Demographic Factors and Comorbidities to Develop a Predictive Model for ICU Mortality in Patients with Acute Exacerbation COPD

Elizabeth S. Chen, Indra Neil Sarkar, Paul Stey, 2018, AMIA.

Exploring the Potential of Direct-To-Consumer Genomic Test Data for Predicting Adverse Drug Events

I. Sarkar, Patrick Zhang, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Adverse events following mRNA SARS-CoV-2 vaccination among U.S. nursing home residents

V. Mor, R. Feifer, I. Sarkar, 2021, Vaccine.

Research and applications: Leveraging biodiversity knowledge for potential phyto-therapeutic applications

Indra Neil Sarkar, Vivekanand Sharma, I. Sarkar, 2013, J. Am. Medical Informatics Assoc..

Diet and Domestication Drive Evolution of the Gut Holobiome

I. Sarkar, V. Ramanan, Shanti Mechery, 2021 .

Multi-source development of an integrated model for family health history

Genevieve B. Melton, Elizabeth S. Chen, Yan Wang, 2015, J. Am. Medical Informatics Assoc..

Characterizing the Use and Contents of Free-Text Family History Comments in the Electronic Health Record

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2012, AMIA.

A multi-site content analysis of social history information in clinical notes.

Elizabeth S. Chen, Elizabeth S Chen, Indra Neil Sarkar, 2011, AMIA ... Annual Symposium proceedings. AMIA Symposium.

Crossing the health IT chasm: considerations and policy recommendations to overcome current challenges and enable value-based care

Blackford Middleton, Julia Adler-Milstein, Jeff Smith, 2017, J. Am. Medical Informatics Assoc..

Automated Extraction of Substance Use Information from Clinical Texts

Serguei V. S. Pakhomov, Genevieve B. Melton, Elizabeth S. Chen, 2015, AMIA.

Identifying Opioid and Illicit Drug Use from Adverse Event Reported Outcomes Using Machine Learning

I. Sarkar, A. Chu, 2017 .

Determining Compound Comorbidities for Heart Failure from Hospital Discharge Data

Elizabeth S. Chen, Indra Neil Sarkar, I. Sarkar, 2012, AMIA.

Real-Time Emergency Department Electronic Notifications Regarding High-Risk Patients: A Systematic Review.

T. Trikalinos, I. Sarkar, M. Ranney, 2019, Telemedicine journal and e-health : the official journal of the American Telemedicine Association.

LigerCat: Using "MeSH Clouds" from Journal, Article, or Gene Citations to Facilitate the Identification of Relevant Biomedical Literature

Catherine N. Norton, Holly Miller, Indra Neil Sarkar, 2009, AMIA.

Mining and Visualizing Family History Associations in the Electronic Health Record: A Case Study for Pediatric Asthma

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2015, AMIA.

Extracting Angina Symptoms from Clinical Notes Using Pre-Trained Transformer Architectures pdf

Wen-Chih Wu, Elizabeth S. Chen, Indra Neil Sarkar, 2020, AMIA.

Trend Analysis of Aggregate Outcomes in Complex Health Survey Data

Elizabeth S. Chen, I. Sarkar, E. Chen, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Adverse Events Following One Dose of mRNA COVID-19 Vaccination Among US Nursing Home Residents With and Without a Previous SARS-CoV-2 Infection

V. Mor, R. Feifer, I. Sarkar, 2021, Journal of the American Medical Directors Association.

GenesTrace: Phenomic Knowledge Discovery via Structured Terminology

Olivier Bodenreider, Yves A. Lussier, Indra Neil Sarkar, 2004, Pacific Symposium on Biocomputing.

Applying FAIR Principles to Improve Data Searchability of Emergency Department Datasets: A Case Study for HCUP-SEDD

Elizabeth S Chen, Indra Neil Sarkar, Karishma Bhatia, 2020, Methods of Information in Medicine.

People, organizational, and leadership factors impacting informatics support for clinical and translational research

Yves A. Lussier, Philip R. O. Payne, Indra Neil Sarkar, 2013, BMC Medical Informatics and Decision Making.

Research Strategies for Biomedical and Health Informatics

S. de Lusignan, S. Bakken, S. Koch, 2017, Methods of information in medicine.

Predicting open wound mortality in the ICU using machine learning

Elizabeth S. Chen, Rajsavi S. Anand, I. Sarkar, 2021, Journal of emergency and critical care medicine.

Selected proceedings of the 2009 Summit on Translational Bioinformatics

Yves A. Lussier, Indra Neil Sarkar, Y. Lussier, 2009, BMC Bioinformatics.

Editorial: Bioinformatics education in the 21st century

Indra Neil Sarkar, I. Sarkar, 2010, Briefings Bioinform..

Enhancing phylogeography by improving geographical information from GenBank

Kei-Hoi Cheung, Matthew Scotch, Indra Neil Sarkar, 2011, J. Biomed. Informatics.

Phylogeography of influenza A H5N1 clade 2.2.1.1 in Egypt

Matthew Scotch, Indra Neil Sarkar, Peter Rabinowitz, 2013, BMC Genomics.

Structural network analysis of biological networks for assessment of potential disease model organisms

Indra Neil Sarkar, Ahmed Ragab Nabhan, I. Sarkar, 2014, J. Biomed. Informatics.

BIODIVERSITY INFORMATICS: MANAGING KNOWLEDGE BEYOND HUMANS AND MODEL ORGANISMS

I. Sarkar, 2006 .

Session Introduction

I. Sarkar, 2007, Pacific Symposium on Biocomputing.

Mining the electronic health record for disease knowledge.

Elizabeth S. Chen, Elizabeth S Chen, Indra Neil Sarkar, 2014, Methods in molecular biology.

Mining the Bibliome

Indra Neil Sarkar, I. Sarkar, 2015 .

OrthologID : automation of genome-scale ortholog identification within a parsimony framework

Ernest K. Lee, G. Coruzzi, R. DeSalle, 2006 .

A vector space model approach to identify genetically related diseases

Indra Neil Sarkar, I. Sarkar, 2012, J. Am. Medical Informatics Assoc..

Health Information Exchange in Emergency Medical Services

Indra Neil Sarkar, Megan L Ranney, Nicholas Asselin, 2018, Applied Clinical Informatics.

Using the Montreal cognitive assessment to identify individuals with subtle cognitive decline.

I. Sarkar, L. Brick, J. Alber, 2022, Neuropsychology.

Implementation Brief: Desiderata for Personal Electronic Communication in Clinical Systems

Justin Starren, Indra Neil Sarkar, I. Sarkar, 2002, J. Am. Medical Informatics Assoc..

Translational Bioinformatics: Bridging the Biological and Clinical Divide

I. Sarkar, 2013 .

Protein-metabolite association studies identify novel proteomic determinants of metabolite levels in human plasma.

C. Bouchard, Qiong Yang, K. Taylor, 2023, Cell metabolism.

*informatics: Identifying and Tracking Informatics Sub-Discipline Terms in the Literature

Elizabeth S. Chen, I N Sarkar, E S Chen, 2015, Methods of Information in Medicine.

Quality Informatics: The Convergence of Healthcare Data, Analytics, and Clinical Excellence

Elizabeth S. Chen, Elizabeth S Chen, Indra Neil Sarkar, 2019, Applied Clinical Informatics.

Building the Informatics Infrastructure for Comparative Effectiveness Research (CER): A Review of the Literature

Indra Neil Sarkar, Erin Holve, Courtney Segal, 2012, Medical care.

Translational Bioinformatics: Bridging the Biological and Clinical Divide

I. Sarkar, 2013 .

Small-Molecule Inhibition of Choline Catabolism in Pseudomonas aeruginosa and Other Aerobic Choline-Catabolizing Bacteria

I. Sarkar, M. Wargo, S. Flemer, 2011, Applied and Environmental Microbiology.

Mental Health Comorbidity Analysis in Pediatric Patients with Autism Spectrum Disorder Using Rhode Island Medical Claims Data

Elizabeth S. Chen, I. Sarkar, K. Brown, 2020, AMIA.

Translating standards into practice: Experiences and lessons learned in biomedicine and health care

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2012, J. Biomed. Informatics.

Evaluation of family history information within clinical documents and adequacy of HL7 clinical statement and clinical genomics family history models for its representation: a case report

Serguei V. S. Pakhomov, Genevieve B. Melton, Elizabeth S. Chen, 2010, J. Am. Medical Informatics Assoc..

Representation of Drug Use in Biomedical Standards, Clinical Text, and Research Measures

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2015, AMIA.

Social and Behavioral History Information in Public Health Datasets

Genevieve B. Melton, Elizabeth S. Chen, Indra Neil Sarkar, 2012, AMIA.

Mining Disease Fingerprints From Within Genetic Pathways

Indra Neil Sarkar, Ahmed Ragab Nabhan, I. Sarkar, 2012, AMIA.

Translational bioinformatics: linking knowledge across biological and clinical realms

A. Butte, L. Ohno-Machado, Y. Lussier, 2011, J. Am. Medical Informatics Assoc..

Geospatial and Temporal Analysis of Thyroid Cancer Incidence in a Rural Population.

L. Morrissey, I. Sarkar, D. Rizzo, 2015, Thyroid : official journal of the American Thyroid Association.

Genetic variation and phylogeny of the cosmopolitan marine genus Tubificoides (Annelida: Clitellata: Naididae: Tubificinae).

I. Sarkar, C. Erséus, S. Kvist, 2010, Molecular phylogenetics and evolution.

Identifying Phytochemicals from Biomedical Literature Utilizing Semantic Knowledge Sources

Indra Neil Sarkar, Wayne Law, Michael J Balick, 2019, MedInfo.

Coding Free-Text Chief Complaints from a Health Information Exchange: A Preliminary Study

Elizabeth S. Chen, I. Sarkar, Sotiris Karagounis, 2020, American Medical Informatics Association Annual Symposium.

Evaluation of family history information within clinical documents and adequacy of HL7 clinical statement and clinical genomics family history models for its representation: a case report

Serguei V. S. Pakhomov, Elizabeth S. Chen, G. Melton, 2010, J. Am. Medical Informatics Assoc..

Back on Track

S. Koch, R. Haux, O. Gefeller, 2017, Methods of Information in Medicine.

Identifying Family History and Substance Use Associations for Adult Epilepsy from the Electronic Health Record

Serguei V. S. Pakhomov, Genevieve B. Melton, Elizabeth S. Chen, 2016, CRI.

Leveraging concept-based approaches to identify potential phyto-therapies

I. Sarkar, Vivekanand Sharma, 2013, J. Biomed. Informatics.

Predicting Mortality in Diabetic ICU Patients Using Machine Learning and Severity Indices

Elizabeth S. Chen, Rajsavi S. Anand, Dustin R. Biron, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Identifying Supplement Use Within Clinical Notes: An Applicationof Natural Language Processing

I. Sarkar, Vivekanand Sharma, 2018, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

ChemGrab : Identification of Chemical Names Using a Combined Negative-Dictionary and Rule-Based Approach

I. Sarkar, Vivekanand Sharma, 2017 .

Implementation Brief: Desiderata for Personal Electronic Communication in Clinical Systems

I. Sarkar, J. Starren, 2002, J. Am. Medical Informatics Assoc..

Phylogeography of influenza A H5N1 clade 2.2.1.1 in Egypt

M. Scotch, I. Sarkar, S. Vegso, 2013, BMC Genomics.

Erratum: At the intersection of public-health informatics and bioinformatics: Using advanced web technologies for phylogeography (Epidemiology (2010) 21 (764-768))

K. Cheung, C. Brandt, M. Scotch, 2011 .

Using Unsupervised Clustering to Identify Pregnancy Co-Morbidities.

Jonathan Chang, Indra Neil Sarkar, I. Sarkar, 2019, AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science.

Using Arden Syntax to Identify Registry-Eligible Very Low Birth Weight Neonates from the Electronic Health Record

Elizabeth S. Chen, Beth Anderson, Indra Neil Sarkar, 2014, AMIA.

Data Analysis and Data Mining: Current Issues in Biomedical Informatics

R. Bellazzi, A. McCray, I. Sarkar, 2011, Methods of Information in Medicine.

Research and applications: Leveraging biodiversity knowledge for potential phyto-therapeutic applications

I. Sarkar, Vivekanand Sharma, 2013, J. Am. Medical Informatics Assoc..

MeSHing molecular sequences and clinical trials: A feasibility study

Elizabeth S. Chen, Indra Neil Sarkar, I. Sarkar, 2010, J. Biomed. Informatics.

Identifying natural health product and dietary supplement information within adverse event reporting systems

Indra Neil Sarkar, Vivekanand Sharma, I. Sarkar, 2018, PSB.

Harnessing Biomedical Natural Language Processing Tools to Identify Medicinal Plant Knowledge from Historical Texts

Indra Neil Sarkar, Michael J. Balick, Vivekanand Sharma, 2017, AMIA.