S. Acinas

发表

Use of the 16S--23S ribosomal genes spacer region in studies of prokaryotic diversity.

F. Rodríguez-Valera, J. García-Martínez, A. I. Antón, 1999, Journal of microbiological methods.

Structure and function of the global ocean microbiome

Luis Pedro Coelho, Jens Roat Kultima, Francisco M. Cornejo-Castillo, 2015, Science.

Ecogenomics of key prokaryotes in the arctic ocean

S. Sunagawa, P. Wincker, C. Pedrós-Alió, 2020, bioRxiv.

Tara Oceans: towards global ocean ecosystems biology

G. Cochrane, P. Bork, S. Sunagawa, 2020, Nature Reviews Microbiology.

Eukaryotic plankton diversity in the sunlit ocean

P. Bork, S. Sunagawa, J. Raes, 2015, Science.

A metagenomic assessment of microbial eukaryotic diversity in the global ocean

S. Acinas, C. Duarte, R. Massana, 2020, Molecular ecology resources.

Divergence and Redundancy of 16S rRNA Sequences in Genomes with Multiple rrn Operons

S. Acinas, M. Polz, L. Marcelino, 2004, Journal of bacteriology.

Metagenomic 16S rDNA Illumina tags are a powerful alternative to amplicon sequencing to explore diversity and structure of microbial communities.

Francisco M. Cornejo-Castillo, P. Bork, S. Sunagawa, 2014, Environmental microbiology.

A Holistic Approach to Marine Eco-Systems Biology

P. Bork, J. Raes, J. Weissenbach, 2011, PLoS biology.

Fine-scale phylogenetic architecture of a complex bacterial community

S. Acinas, C. Pharino, M. Polz, 2004, Nature.

Patterns and ecological drivers of ocean viral communities

P. Bork, S. Sunagawa, P. Wincker, 2015, Science.

Global genetic capacity for mixotrophy in marine picocyanobacteria

P. Bork, S. Sunagawa, S. Chisholm, 2016, The ISME Journal.

Plankton networks driving carbon export in the oligotrophic ocean

Luis Pedro Coelho, P. Bork, S. Sunagawa, 2015, Nature.

Ecology of marine Bacteroidetes: a comparative genomics approach

C. Pedrós-Alió, S. Acinas, B. Fernandez-Gomez, 2013, The ISME Journal.

Metabolic Architecture of the Deep Ocean Microbiome

Francisco M. Cornejo-Castillo, P. Bork, S. Sunagawa, 2019, bioRxiv.

Determinants of community structure in the global plankton interactome

Peer Bork, Pablo Sánchez, Shinichi Sunagawa, 2015, Science.

Patterns and architecture of genomic islands in marine bacteria

E. Casamayor, C. Pedrós-Alió, S. Acinas, 2012, BMC Genomics.

PCR-Induced Sequence Artifacts and Bias: Insights from Comparison of Two 16S rRNA Clone Libraries Constructed from the Same Sample

Vanja Klepac-Ceraj, Silvia G. Acinas, Martin F. Polz, 2005, Applied and Environmental Microbiology.

Global Trends in Marine Plankton Diversity across Kingdoms of Life

Luis Pedro Coelho, G. Cochrane, P. Bork, 2019, Cell.

Ecogenomics and biogeochemical impacts of uncultivated globally abundant ocean viruses

Peer Bork, Bas E. Dutilh, Shinichi Sunagawa, 2016, bioRxiv.

Particle‐association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes

Francisco M. Cornejo-Castillo, S. Acinas, C. Duarte, 2015, Molecular ecology.

Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean

Niels W. Hanson, Jody J. Wright, Brian P. Thompson, 2013, Proceedings of the National Academy of Sciences.

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Francisco M. Cornejo-Castillo, G. Cochrane, P. Bork, 2017, Scientific Data.

Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea

Francisco M. Cornejo-Castillo, K. Holmfeldt, S. Acinas, 2015, PloS one.

Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Luis Pedro Coelho, G. Cochrane, P. Bork, 2019, Cell.

Validation of a new catalysed reporter deposition-fluorescence in situ hybridization probe for the accurate quantification of marine Bacteroidetes populations.

Francisco M. Cornejo-Castillo, H. Sarmento, S. Acinas, 2015, Environmental microbiology.

Evidence of power-law flow in the Mojave desert mantle

S. Acinas, C. Pharino, M. Polz, 2004 .

Marine DNA Viral Macro- and Microdiversity from Pole to Pole

G. Cochrane, P. Bork, S. Sunagawa, 2019, Cell.

Environmental vulnerability of the global ocean plankton community interactome

H. Sarmento, O. Jaillon, P. Wincker, 2020, bioRxiv.

Phenotypic and genetic diversification of Pseudanabaena spp. (cyanobacteria)

Lucas J Stal, Jef Huisman, Thomas H A Haverkamp, 2009, The ISME Journal.

Sequencing effort dictates gene discovery in marine microbial metagenomes

V. Eguíluz, V. Bajic, T. Gojobori, 2020, Environmental microbiology.

Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems

Luis Pedro Coelho, P. Bork, S. Sunagawa, 2019, Global Biogeochemical Cycles.

Unifying the known and unknown microbial coding sequence space

Renzo Kottmann, Robert D. Finn, Frank Oliver Glöckner, 2020, bioRxiv.

Diversity and distribution of marine heterotrophic bacteria from a large culture collection

C. Pedrós-Alió, S. Acinas, C. Duarte, 2020, BMC Microbiology.

Transcriptome Fingerprinting Analysis: An Approach to Explore Gene Expression Patterns in Marine Microbial Communities

C. Pedrós-Alió, S. Acinas, C. Pujades, 2011, PloS one.

Disentangling the mechanisms shaping the surface ocean microbiota

S. Acinas, C. Duarte, G. Salazar, 2019, Microbiome.

Biosynthetic potential of the global ocean microbiome

Tom O. Delmont, P. Bork, S. Sunagawa, 2022, Nature.

Lawrence Berkeley National Laboratory Recent Work Title Plankton networks driving carbon export in the oligotrophic ocean Permalink

Luis Pedro Coelho, Sullivan, P. Bork, 2016 .

Phenotypic plasticity in freshwater picocyanobacteria

S. Acinas, J. Gasol, M. Royo-Llonch, 2017, Environmental microbiology.

Priorities for ocean microbiome research

Tom O. Delmont, P. Bork, S. Sunagawa, 2022, Nature Microbiology.

The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes

Tom O. Delmont, G. Cochrane, P. Bork, 2022, Nucleic Acids Res..

Different processes shape prokaryotic and picoeukaryotic assemblages in the sunlit ocean microbiome

S. Acinas, C. Duarte, G. Salazar, 2018, bioRxiv.

UCYN‐A3, a newly characterized open ocean sublineage of the symbiotic N2‐fixing cyanobacterium Candidatus Atelocyanobacterium thalassa

Francisco M. Cornejo-Castillo, S. Acinas, M. Royo-Llonch, 2018, Environmental microbiology.

Scaling of species distribution explains the vast potential marine prokaryote diversity

S. Sunagawa, V. Eguíluz, J. Fernández-Gracia, 2019, Scientific Reports.

Disentangling microbial networks across pelagic zones in the global ocean

J. Poulain, S. Acinas, Samuel Chaffron, 2022, bioRxiv.

Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis

Francisco M. Cornejo-Castillo, S. Audic, S. Acinas, 2015, The ISME Journal.

Identification of Aeromonas clinical isolates by restriction fragment length polymorphism of PCR-amplified 16S rRNA genes

A. Martínez-Murcia, S. Acinas, M. Figueras, 1997, Journal of clinical microbiology.

A myovirus encoding both photosystem I and II proteins enhances cyclic electron flow in infected Prochlorococcus cells

Francisco M. Cornejo-Castillo, Itai Sharon, D. Lindell, 2017, Nature Microbiology.

Expansion of the global RNA virome reveals diverse clades of bacteriophages

Vincent J. Denef, Natalia N. Ivanova, David A. C. Beck, 2022, Cell.

Recommendations for Plankton Measurements on OceanSITES Moorings With Relevance to Other Observing Sites

F. Muller‐Karger, J. Karstensen, K. Fennel, 2022, Frontiers in Marine Science.

Marine microbial diversity as seen by high-throughput sequencing

C. Pedrós-Alió, S. Acinas, R. Massana, 2018 .

Parvicella tangerina gen. nov., sp. nov. (Parvicellaceae fam. nov., Flavobacteriales), first cultured representative of the marine clade UBA10066, and Lysobacter luteus sp. nov., from activated sludge of a seawater-processing wastewater treatment plant.

S. Acinas, J. Mas, O. Sánchez, 2022, International journal of systematic and evolutionary microbiology.

Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities

S. Acinas, J. Gasol, C. Duarte, 2022, bioRxiv.

Diversity of nitrogen-fixing bacteria in cyanobacterial mats.

S. Acinas, L. Stal, I. Severin, 2010, FEMS microbiology ecology.

Diversity of nitrogen-fixing bacteria in cyanobacterial

S. Acinas, L. Stal, I. Severin, 2010 .

Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses

Peer Bork, Bas E. Dutilh, Shinichi Sunagawa, 2016, Nature.

Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes

Jean-Michel Claverie, Hervé Moreau, Peer Bork, 2013, The ISME Journal.

Open science resources for the discovery and analysis of Tara Oceans data

Peer Bork, Shinichi Sunagawa, Daniele Iudicone, 2015, Scientific Data.

Important contribution of macroalgae to oceanic carbon sequestration

Nathan R. Geraldi, S. Acinas, C. Duarte, 2019, Nature Geoscience.

Marine DNA Viral Macro- and Microdiversity from Pole to Pole

G. Cochrane, P. Bork, S. Sunagawa, 2019, Cell.

Global biogeography of the smallest plankton across ocean depths

H. Sarmento, S. Acinas, J. Gasol, 2023, bioRxiv.

Phenotyping characterization of methylmercury marine bacteria detoxifiers

S. Acinas, O. Sánchez, 2018 .

Higher contribution of globally rare bacterial taxa reflects environmental transitions across the surface ocean

S. Acinas, C. Duarte, J. Gasol, 2019, Molecular ecology.

Ecological and functional capabilities of an uncultured Kordia sp.

C. Pedrós-Alió, S. Acinas, M. Royo-Llonch, 2019, Systematic and applied microbiology.

Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes

Francisco M. Cornejo-Castillo, R. Stepanauskas, C. Pedrós-Alió, 2017, Front. Microbiol..

Macroscale patterns of oceanic zooplankton composition and size structure

G. Cochrane, P. Bork, S. Sunagawa, 2021, Scientific Reports.

Diversity of Free-Living and Attached Bacteria in Offshore Western Mediterranean Waters as Depicted by Analysis of Genes Encoding 16S rRNA

J. Antón, F. Rodríguez-Valera, S. Acinas, 1999, Applied and Environmental Microbiology.

A genomic catalog of Earth’s microbiomes

Vincent J. Denef, Natalia N. Ivanova, Paramvir S. Dehal, 2020, Nature Biotechnology.

Patterns and architecture of genomic islands in marine bacteria

E. Casamayor, C. Pedrós-Alió, S. Acinas, 2012, BMC Genomics.

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

Corinne Da Silva, Tom O. Delmont, G. Cochrane, 2022, Cell genomics.

Global diversity and biogeography of deep-sea pelagic prokaryotes

Francisco M. Cornejo-Castillo, S. Acinas, C. Duarte, 2015, The ISME Journal.

Large-scale ocean connectivity and planktonic body size

J. I. González-Gordillo, J. Cuesta, J. Watson, 2017, Nature Communications.

Mesonia oceanica sp. nov., isolated from oceans during the Tara oceans expedition, with a preference for mesopelagic waters.

C. Pedrós-Alió, S. Acinas, R. Aznar, 2020, International journal of systematic and evolutionary microbiology.

Evaluation of 23S rRNA PCR Primers for Use in Phylogenetic Studies of Bacterial Diversity

Stefan Bertilsson, Vanja Klepac-Ceraj, Silvia G. Acinas, 2006, Applied and Environmental Microbiology.

Single-virus genomics reveals hidden cosmopolitan and abundant viruses

J. Antón, F. Rodríguez-Valera, M. Martínez-García, 2017, Nature Communications.

Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome

G. Cochrane, P. Bork, S. Sunagawa, 2022, Science.

Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean

S. Sunagawa, P. Wincker, C. Pedrós-Alió, 2021, Nature Microbiology.

Environmental vulnerability of the global ocean epipelagic plankton community interactome

H. Sarmento, O. Jaillon, P. Wincker, 2021, Science advances.

A robust approach to estimate relative phytoplankton cell abundances from metagenomes

P. Wincker, S. Acinas, J. Gasol, 2021, bioRxiv.

Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods

Francisco M. Cornejo-Castillo, R. Pepperkok, P. Wincker, 2020, Nature Communications.

Recommendations for plankton measurements on the GO-SHIP program with relevance to other sea-going expeditions. SCOR Working Group 154 GO-SHIP Report.

Isabel Ferrera, Johannes Karstensen, Julia Uitz, 2020 .

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

Francisco M. Cornejo-Castillo, P. Bork, S. Sunagawa, 2016, Nature Communications.

Environmental characteristics of Agulhas rings affect interocean plankton transport

Peer Bork, Shinichi Sunagawa, Stéphane Audic, 2015, Science.

Primer Design for an Accurate View of Picocyanobacterial Community Structure by Using High-Throughput Sequencing

Francisco M. Cornejo-Castillo, S. Acinas, I. Ferrera, 2019, Applied and Environmental Microbiology.

A consensus protocol for the recovery of mercury methylation genes from metagenomes

Daniel S. Jones, C. Gilmour, K. McMahon, 2022, bioRxiv.

Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities

Francisco M. Cornejo-Castillo, P. Bork, S. Sunagawa, 2021, Communications biology.

Unifying the global coding sequence space enables the study of genes with unknown function across biomes

Renzo Kottmann, Robert D. Finn, Frank Oliver Glöckner, 2020 .

Unifying the known and unknown microbial coding sequence space

Tom O. Delmont, F. Glöckner, E. Casamayor, 2020, bioRxiv.

Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes.

J. Poulain, P. Wincker, H. Ogata, 2015, Environmental microbiology reports.

Validation of a new CARD-FISH probe for the accurate quantification of marine Bacteroidetes populations 1

Francisco M. Cornejo-Castillo, H. Sarmento, S. Acinas, 2014 .

Uncharted biosynthetic potential of the ocean microbiome

Tom O. Delmont, P. Bork, S. Sunagawa, 2021, bioRxiv.

mTAGs: taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA genes

Falk Hildebrand, Shinichi Sunagawa, Silvia G. Acinas, 2021, Bioinform..

Roadmap for naming uncultivated Archaea and Bacteria

Donovan H. Parks, T. H. Smits, Alexander J. Probst, 2020, Nature Microbiology.

Diversity patterns of marine heterotrophic culturable bacteria along vertical and latitudinal gradients

C. Pedrós-Alió, S. Acinas, C. Duarte, 2019, bioRxiv.

Prokaryotic functional gene diversity in the sunlit ocean: Stumbling in the dark.

S. Acinas, I. Ferrera, J. Gasol, 2015, Current opinion in microbiology.

Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans

S. Acinas, C. Duarte, J. Gasol, 2015, The ISME Journal.

Abundant deep ocean heterotrophic bacteria are culturable

S. Sunagawa, P. Wincker, T. Gojobori, 2022, bioRxiv.

Diversity and phylogeny of Baltic Sea picocyanobacteria inferred from their ITS and phycobiliprotein operons.

J. Huisman, S. Acinas, L. Stal, 2007, Environmental microbiology.

Light color acclimation is a key process in the global ocean distribution of Synechococcus cyanobacteria

Gregory K. Farrant, E. Boss, P. Wincker, 2018, Proceedings of the National Academy of Sciences.

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria

Francisco M. Cornejo-Castillo, Gregory K. Farrant, Frances D. Pitt, 2016, Proceedings of the National Academy of Sciences.

Closing the gaps on the viral photosystem‐I psaDCAB gene organization

Francisco M. Cornejo-Castillo, F. Rohwer, S. Acinas, 2015, Environmental microbiology.

Roadmap for naming uncultivated Archaea and Bacteria

Donovan H. Parks, Alexander J. Probst, L. Hug, 2020, Nature Microbiology.

A(r)Ray of Hope in Analysis of the Function and Diversity of Microbial Communities

S. Bertilsson, S. Acinas, M. Polz, 2003, The Biological Bulletin.

Disentangling marine microbial networks across space

J. Poulain, S. Acinas, Samuel Chaffron, 2021 .

Marine Picoplankton Metagenomes from Eleven Vertical Profiles Obtained by the Malaspina Expedition in the Tropical and Subtropical Oceans

T. Gojobori, S. Acinas, S. Pesant, 2023, bioRxiv.

Light color acclimation : a key process in the global ocean 1 distribution of Synechococcus cyanobacteria 2 3

Gregory K. Farrant, E. Boss, P. Wincker, 2018 .

Spatial patterns of bacterial richness and evenness in the NW Mediterranean Sea explored by pyrosequencing of the 16S rRNA

C. Pedrós-Alió, S. Acinas, J. Gasol, 2010 .

Rapid Evolution of Plastic-degrading Enzymes Prevalent in the Global Ocean

T. Gojobori, S. Acinas, S. Arold, 2020, bioRxiv.

Abiotic selection of microbial genome size in the global ocean

S. Acinas, J. Gasol, D. Karl, 2023, Nature Communications.

Description of prokaryotic biodiversity along the salinity gradient of a multipond solar saltern by direct PCR amplification of 16S rDNA

F. Rodríguez-Valera, A. Martínez-Murcia, S. Acinas, 1996, Hydrobiologia.

Heterotrophic bacteria, activity and bacterial diversity in two coastal lagoons as detected by culture and 16S rRNA genes PCR amplification and partial sequencing

F. Rodríguez-Valera, A. Martínez-Murcia, S. Acinas, 1996, Hydrobiologia.

Prevalence and microdiversity of Alteromonas macleodii-like microorganisms in different oceanic regions.

F. Rodríguez-Valera, J. García-Martínez, S. Acinas, 2002, Environmental microbiology.

Archaeal Biodiversity in Crystallizer Ponds from a Solar Saltern: Culture versus PCR

J. Antón, F. Rodríguez-Valera, S. Acinas, 2000, Microbial Ecology.

Spatial and temporal variation in marine bacterioplankton diversity as shown by RFLP fingerprinting of PCR amplified 16S rDNA

C. Pedrós-Alió, F. Rodríguez-Valera, S. Acinas, 1997 .

Evaluation of prokaryotic diversity by restrictase digestion of 16S rDNA directly amplified from hypersaline environments

F. Rodríguez-Valera, A. Martínez-Murcia, S. Acinas, 1995 .

UvA-DARE ( Digital Academic Repository ) Phenotypic and genetic diversification of Pseudanabaena spp

Lucas J Stal, Jef Huisman, J. Huisman, 2008 .

Evaluation of Marine Bacteroidetes-Specific Primers for Microbial Diversity and Dynamics Studies

S. Acinas, J. Gasol, C. Díez-Vives, 2012, Microbial Ecology.

Evaluation of Marine Bacteroidetes-Specific Primers for Microbial Diversity and Dynamics Studies

S. Acinas, J. Gasol, C. Díez-Vives, 2012, Microbial Ecology.

Prevalence of Heterotrophic Methylmercury Detoxifying Bacteria across Oceanic Regions

S. Acinas, P. Sánchez, R. C. R. Rodríguez Martín-Doimeadios, 2021, bioRxiv.

Delineation of ecologically distinct units of marine Bacteroidetes in the Northwestern Mediterranean Sea

C. Pedrós-Alió, S. Acinas, I. Ferrera, 2019, Molecular ecology.

The phylogenetic and ecological context of cultured and whole genome-sequenced planktonic bacteria from the coastal NW Mediterranean Sea.

E. Casamayor, C. Pedrós-Alió, S. Acinas, 2014, Systematic and applied microbiology.

The quality of dissolved organic matter shapes the biogeography of the active bathypelagic microbiome

S. Acinas, C. Duarte, G. Salazar, 2021, bioRxiv.

Author Correction: Macroscale patterns of oceanic zooplankton composition and size structure

G. Cochrane, P. Bork, S. Sunagawa, 2021, Scientific Reports.

Spatial and temporal variability among marine Bacteroidetes populations in the NW Mediterranean Sea.

S. Acinas, J. Gasol, C. Díez-Vives, 2014, Systematic and applied microbiology.

patial and temporal variability among marine Bacteroidetes opulations in the NW Mediterranean Sea ristina

S. Acinas, J. Gasol, Díez-Vives, 2013 .

A myovirus encoding both photosystem I and II proteins enhances cyclic electron flow in infected Prochlorococcus cells

Francisco M. Cornejo-Castillo, Itai Sharon, D. Lindell, 2017, Nature Microbiology.

Beyond Chlorophyll Fluorescence: The Time is Right to Expand Biological Measurements in Ocean Observing Programs

Johannes Karstensen, Heidi M. Sosik, Julia Uitz, 2018, Limnology and Oceanography Bulletin.

Functional repertoire convergence of distantly related eukaryotic plankton lineages revealed by genome-resolved metagenomics

Tom O. Delmont, G. Cochrane, P. Bork, 2020, bioRxiv.

Repository of the Max Delbrück Center for Molecular Medicine (MDC) in the Helmholtz Association

Luis Pedro Coelho, Corinne Da Silva, S. Sunagawa, 2023 .

Descriptor : Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

P. Bork, S. Sunagawa, J. Raes, 2017 .

Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation.

S. Sunagawa, P. Wincker, C. Pedrós-Alió, 2023, ISME communications.

Eukaryotic plankton diversity in the sunlit ocean

P. Bork, S. Sunagawa, J. Raes, 2015, Science.

Spatial and temporal variability among marine Bacteroidetes populations in the NW Mediterranean Sea.

S. Acinas, J. Gasol, Cristina Díez-Vives, 2014, Systematic and applied microbiology.

Ecology of marine Bacteroidetes: a comparative genomics approach

C. Pedrós-Alió, S. Acinas, M. Richter, 2013, The ISME Journal.

Thalassocella blandensis gen. nov., sp. nov., a novel member of the family Cellvibrionaceae.

C. Pedrós-Alió, S. Acinas, R. Aznar, 2019, International journal of systematic and evolutionary microbiology.

Genomic evidence for global ocean plankton biogeography shaped 1 by large-scale current systems 2

S. Sunagawa, J. Poulain, O. Jaillon, 2019 .

Global diversity and biogeography of deep-sea pelagic prokaryotes

Francisco M. Cornejo-Castillo, S. Acinas, J. Gasol, 2015, The ISME Journal.

a newly characterized open ocean sublineage of the symbiotic N 2 -fixing

Francisco M. Cornejo-Castillo, S. Acinas, M. Royo-Llonch, 2018 .

Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans

P. Bork, S. Sunagawa, J. Poulain, 2018, Nature Communications.

Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes.

J. Poulain, P. Wincker, H. Ogata, 2015, Environmental microbiology reports.

Genomic and transcriptomic characterization of methylmercury detoxification in a deep ocean Alteromonas mediterranea ISS312.

S. Acinas, Isabel Sanz-Sáez, O. Sánchez, 2024, Environmental pollution.

Unifying the known and unknown microbial coding sequence space

Tom O. Delmont, E. Casamayor, P. Buttigieg, 2022, eLife.

Marine picoplankton metagenomes and MAGs from eleven vertical profiles obtained by the Malaspina Expedition

Francisco M. Cornejo-Castillo, S. Acinas, S. Pesant, 2024, Scientific data.