Yaniv Lubling

发表

Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project

Raymond K. Auerbach, Kevin Y. Yip, Stefan R. Henz, 2010, Science.

Single cell Hi-C reveals cell-to-cell variability in chromosome structure

A. Tanay, P. Fraser, S. Schoenfelder, 2013, Nature.

Cell-cycle dynamics of chromosomal organisation at single-cell resolution

A. Tanay, P. Fraser, T. Nagano, 2016, Nature.

Multiscale 3D Genome Rewiring during Mouse Neural Development

A. Tanay, G. Papadopoulos, Yaniv Lubling, 2017, Cell.

Nucleosome Occupancy P53 Binds Preferentially to Genomic Regions with High Dna-encoded Material Supplemental P

E. Segal, Y. Field, J. Widom, 2022 .

p53 binds preferentially to genomic regions with high DNA-encoded nucleosome occupancy.

E. Segal, Y. Field, J. Widom, 2010, Genome research.

Compensation for differences in gene copy number among yeast ribosomal proteins is encoded within their promoters.

Yaniv Lubling, Eran Segal, Eilon Sharon, 2011, Genome research.

Cell cycle dynamics of chromosomal organisation at single-cell resolution

Yaniv Lubling, Amos Tanay, Peter Fraser, 2016 .

MetaCell: analysis of single-cell RNA-seq data using K-nn graph partitions

A. Tanay, Amir Giladi, Yaniv Lubling, 2019, Genome Biology.

Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing

Richard A. Moore, Khanh N. Dinh, S. Tavaré, 2019, Cell.

Dysfunctional CD8 T Cells Form a Proliferative, Dynamically Regulated Compartment within Human Melanoma

I. Amit, A. Tanay, Eyal David, 2019, Cell.

Single Cell Analysis of Regions of Interest (SCARI) using a novel photoswitchable tag

I. Amit, A. Tanay, Eyal David, 2020, bioRxiv.

Metabolic Imaging Detects Resistance to PI3Kα Inhibition Mediated by Persistent FOXM1 Expression in ER+ Breast Cancer

C. Caldas, O. Rueda, S. Linn, 2020, Cancer cell.

Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals

Yaniv Lubling, Eran Segal, Jonathan Widom, 2008, PLoS Comput. Biol..

Dysfunctional CD8 T Cells Form a Proliferative, Dynamically Regulated Compartment within Human Melanoma

I. Amit, A. Tanay, Eyal David, 2019, Cell.

Nucleosome maps of the human cytomegalovirus genome reveal a temporal switch in chromatin organization linked to a major IE protein

E. Segal, D. Tillo, E. Zalckvar, 2013, Proceedings of the National Academy of Sciences.

ribosomal proteins is encoded within their promoters Compensation for differences in gene copy number among yeast Material

E. Segal, A. Weinberger, M. Lotan-Pompan, 2011 .

UMI-4C for quantitative and targeted chromosomal contact profiling

Pedro Olivares-Chauvet, Zohar Mukamel, Omer Schwartzman, 2016, Nature Methods.

Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell

Yaniv Lubling, Amos Tanay, Wendy Dean, 2015, Nature Protocols.

Single-cell characterization of haematopoietic progenitors and their trajectories in homeostasis and perturbed haematopoiesis

Yaniv Lubling, Amos Tanay, Andreas Trumpp, 2018, Nature Cell Biology.

MetaCell: analysis of single cell RNA-seq data using k-NN graph partitions

Aviezer Lifshitz, Yaniv Lubling, Amos Tanay, 2018, bioRxiv.

Single-cell characterization of haematopoietic progenitors and their trajectories in homeostasis and perturbed haematopoiesis

I. Amit, F. Ginhoux, A. Tanay, 2018, Nature Cell Biology.

Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization

Noam Kaplan, Yaniv Lubling, Eran Segal, 2009, Nature Genetics.

Capturing pairwise and multi-way chromosomal conformations using chromosomal walks

Pedro Olivares-Chauvet, Zohar Mukamel, Aviezer Lifshitz, 2016, Nature.

High nucleosome occupancy is encoded at X-linked gene promoters in C. elegans.

E. Segal, J. Lieb, Sevinç Ercan, 2011, Genome research.

modENCODE Project Genome by the Caenorhabditis elegans Integrative Analysis of the

Raymond K. Auerbach, Kevin Y. Yip, Stefan R. Henz, 2011 .

An integrated open framework for thermodynamics of reactions that combines accuracy and coverage

Yaniv Lubling, Ron Milo, Avi I. Flamholz, 2012, Bioinform..

Single Cell Analysis of Regions of Interest (SCARI) using a photo-sensitive tag

I. Amit, A. Tanay, Eyal David, 2021, Nature Chemical Biology.

transcriptome C . elegans of the descriptionCircLigase-based capture yields a refined and extended Multimodal RNA-seq using single-strand , double-strand , and Material Supplemental

Arun K. Ramani, Ayelet T. Lamm, John A. Calarco, 2011 .

SHAMAN: bin-free randomization, normalization and screening of Hi-C matrices

Aviezer Lifshitz, Yaniv Lubling, Amos Tanay, 2017, bioRxiv.

Dysfunctional CD8 T Cells Form a Proliferative, Dynamically Regulated Compartment within Human Melanoma

I. Amit, A. Tanay, Eyal David, 2020, Cell.

Single cell Hi-C identifies plastic chromosome conformations underlying the gastrulation enhancer landscape

R. Shamir, A. Tanay, P. Fraser, 2023, Nature communications.