J. Woolford

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The yeast NOP4 gene product is an essential nucleolar protein required for pre‐rRNA processing and accumulation of 60S ribosomal subunits.

C. Sun, J. Woolford, Chao Sun, 1994, The EMBO journal.

Increased expression of Saccharomyces cerevisiae translation elongation factor 1 alpha bypasses the lethality of a TEF5 null allele encoding elongation factor 1 beta.

J. Woolford, T. Kinzy, 1995, Genetics.

Mod-seq: high-throughput sequencing for chemical probing of RNA structure

J. Woolford, Jason Talkish, Gemma E. May, 2014, RNA.

Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit

J. Frank, R. Grassucci, J. Woolford, 2016, Proceedings of the National Academy of Sciences.

Isolation of yeast histone genes H2A and H2B

M. Rosbash, J. Woolford, D. Kaback, 1979, Cell.

Kinesin molecular motor Eg5 functions during polypeptide synthesis

J. Woolford, K. Bartoli, W. Saunders, 2011, Molecular biology of the cell.

J. Woolford, Brian C. Rymond, J. Roy, 1995, Molecular and cellular biology.

Tripartite upstream promoter element essential for expression of Saccharomyces cerevisiae ribosomal protein genes

J. Woolford, M. Rotenberg, 1986, Molecular and cellular biology.

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.

J. Woolford, J. de la Cruz, K. Karbstein, 2015, Annual review of biochemistry.

10 The Ribosome and Its Synthesis

J. Warner, J. Woolford, J. R. Warner, 1991 .

Insights into remodeling events during eukaryotic large ribosomal subunit assembly provided by high resolution cryo-EM structures

J. Woolford, N. Gao, Shan Wu, 2017, RNA biology.

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes

M. Dong, J. Woolford, D. Tan, 2016, Nature.

Studies on the Assembly Characteristics of Large Subunit Ribosomal Proteins in S. cerevisae

J. Woolford, M. Faubladier, Martina Sauert, 2013, PloS one.

Eukaryote-specific rRNA expansion segments function in ribosome biogenesis

J. Woolford, Madhu Ramesh, 2016, RNA.

Increased Expression of Saccharomyces cerm-due Translation Elongation Factor la Bypasses the Lethality of a TEF5 N d Allele Encoding Elongation Factor lp

J. Woolford, Kinzy, L. Woolford, 2002 .

The structure and biogenesis of yeast ribosomes.

J. Woolford, 1991, Advances in genetics.

Multiple Regions of Yeast Ribosomal Protein L1 Are Important for Its Interaction with 5 S rRNA and Assembly into Ribosomes (*)

John C. Lee, J. Stark, J. Woolford, 1995, The Journal of Biological Chemistry.

Composition and functional characterization of yeast 66S ribosome assembly intermediates.

J. Shabanowitz, D. Hunt, J. Woolford, 2001, Molecular cell.

Ribosomal protein eL39 is important for maturation of the nascent polypeptide exit tunnel and proper protein folding during translation

J. Woolford, J. de la Cruz, Ning Gao, 2022, Nucleic acids research.

The assembly factor Erb1 functions in multiple remodeling events during 60S ribosomal subunit assembly in S. cerevisiae

J. Woolford, Salini Konikkat, Stephanie Biedka, 2017, Nucleic acids research.

Votume 11 Number 2 1983 Nucleic Acids Research Molecular doning and analysis of the CR Yl gene : a yeast ribosomal protein gene

J. Woolford, J. Larkin, 2005 .

A protein containing conserved RNA-recognition motifs is associated with ribosomal subunits in Saccharomyces cerevisiae.

J. Woolford, T. Ripmaster, 1993, Nucleic acids research.

Isolation and characterization of the RNA2, RNA3, and RNA11 genes of Saccharomyces cerevisiae

J. Woolford, J. Stavenhagen, R. Last, 1984, Molecular and cellular biology.

Isolation and Characterization of the RNA2, RNA3, and RNAJJ Genes of Saccharomyces cerevisiae

J. Woolford, J. Stavenhagen, R. Last, 2022 .

DRS 1 to DRS 7 , Novel Genes Required for Ribosome Assembly and Function in Saccharomyces cerevisiae

J. Woolford, T. Ripmaster, T. Vaughn, 2022 .

The effect of temperature-sensitive RNA mutants on the transcription products from cloned ribosomal protein genes of yeast

M. Rosbash, J. Woolford, J. Teem, 1981, Cell.

R-looping and structural gene indentification of recombinant DNA.

M. Rosbash, J. Woolford, R. Ricciardi, 1979, Methods in enzymology.

The yeast Prp3 protein is a U4/U6 snRNP protein necessary for integrity of the U4/U6 snRNP and the U4/U6.U5 tri-snRNP.

J. Woolford, E. Weidenhammer, J. G. Anthony, 1997, RNA.

Ribosomal protein genes rp 39(10 - 78), rp 39(11 - 40), rp 51, and rp 52 are not contiguous to other ribosomal protein genes in the Saccharomyces cerevisiae genome.

M. Rosbash, J. Woolford, 1981, Nucleic acids research.

Ribosome assembly coming into focus

J. Woolford, S. Klinge, 2018, Nature Reviews Molecular Cell Biology.

Additional principles that govern the release of pre-ribosomes from the nucleolus into the nucleoplasm in yeast

J. Woolford, Jelena Micic, Amber J LaPeruta, 2022, Nucleic acids research.

Hierarchical recruitment of ribosomal proteins and assembly factors remodels nucleolar pre-60S ribosomes

J. Woolford, Luke Diorio-Toth, Hailey M Brown, 2018, The Journal of cell biology.

Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae

J. Woolford, S. Baserga, Susan J Baserga, 2013, Genetics.

Nuclear pre‐mRNA splicing in yeast

J. Woolford, 1989, Yeast.

Localization of Saccharomyces cerevisiae ribosomal protein L16 on the surface of 60 S ribosomal subunits by immunoelectron microscopy.

Y. Tsay, J. Woolford, G. Shankweiler, 1994, The Journal of biological chemistry.

J. Woolford, J. Maddock, R. Last, 1987, Genetics.

Extragenic suppressors of Saccharomyces cerevisiae prp4 mutations identify a negative regulator of PRP genes.

J. Woolford, J. Maddock, E. Weidenhammer, 1994, Genetics.

Molecular genetics of cryptopleurine resistance in Saccharomyces cerevisiae: expression of a ribosomal protein gene family.

A. Paulovich, J. Thompson, J. Woolford, 1993, Genetics.

Chaperoning ribosome assembly.

J. Woolford, 2002, Molecular cell.

Ribosomal protein synthesis is not regulated at the translational level in Saccharomyces cerevisiae: balanced accumulation of ribosomal proteins L16 and rp59 is mediated by turnover of excess protein.

Y. Tsay, J. Thompson, J. Woolford, 1988, Genes & development.

Depletion of Saccharomyces cerevisiae ribosomal protein L16 causes a decrease in 60S ribosomal subunits and formation of half-mer polyribosomes.

J. Woolford, M. Rotenberg, M. Moritz, 1988, Genes & development.

Ribosomal Protein S14 of Saccharomyces cerevisiae Regulates Its Expression by Binding toRPS14B Pre-mRNA and to 18S rRNA

J. Woolford, S. W. Fewell, Sheara W. Fewell, 1999, Molecular and Cellular Biology.

Translation | Ribosome Assembly

J. Woolford, F. Fitzgerald, 2021, Encyclopedia of Biological Chemistry III.

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1

J. Woolford, Jianlin Lei, N. Gao, 2017, Nature Structural &Molecular Biology.

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae

J. Woolford, Jason Talkish, J. Jakovljevic, 2012, Nucleic acids research.

A putative ATP-dependent RNA helicase involved in Saccharomyces cerevisiae ribosome assembly.

J. Woolford, T. Ripmaster, G. P. Vaughn, 1992, Proceedings of the National Academy of Sciences of the United States of America.

Principles of 60S ribosomal subunit assembly emerging from recent studies in yeast.

J. Woolford, Salini Konikkat, 2017, The Biochemical journal.

Saccharomyces cerevisiae Ribosomal Protein L26 Is Not Essential for Ribosome Assembly and Function

J. Woolford, J. de la Cruz, R. Babiano, 2012, Molecular and Cellular Biology.

Saccharomyces cerevisiae nucleolar protein Nop7p is necessary for biogenesis of 60S ribosomal subunits.

J. Woolford, J. Jakovljevic, C. C. Adams, 2002, RNA.

A new nomenclature for the cytoplasmic ribosomal proteins of Saccharomyces cerevisiae.

W. H. Mager, R. Planta, J. Lee, 1997, Nucleic acids research.

Feedback inhibition of the yeast ribosomal protein gene CRY2 is mediated by the nucleotide sequence and secondary structure of CRY2 pre-mRNA

A. Paulovich, J. Woolford, Z. Li, 1995, Molecular and cellular biology.

Structure and expression of the Saccharomyces cerevisiae CRY1 gene: a highly conserved ribosomal protein gene

J. Thompson, J. Woolford, J. Larkin, 1987, Molecular and cellular biology.

Genetic Analysis of Yeast Ribosome Biogenesis and Function

Y. Tsay, J. Thompson, J. Woolford, 1988 .

Isolation of cloned DNA sequences containing ribosomal protein genes from saccharomyces cerevisiae

M. Rosbash, J. Woolford, L. Hereford, 1979, Cell.

A comparison of yeast ribosomal protein gene DNA sequences.

W. H. Mager, R. Planta, M. Rosbash, 1984, Nucleic acids research.

Identification and characterization of human genes encoding Hprp3p and Hprp4p, interacting components of the spliceosome.

H. Heng, L. Tsui, J. Woolford, 1997, Human molecular genetics.

Prp31p promotes the association of the U4/U6 x U5 tri-snRNP with prespliceosomes to form spliceosomes in Saccharomyces cerevisiae

J. Woolford, E. Weidenhammer, M. Ruiz-Noriega, 1997, Molecular and cellular biology.

Homologous PNA Hybridization to Noncanonical DNA G-Quadruplexes.

J. Woolford, B. Armitage, Karen A. Kormuth, 2016, Biochemistry.

Paradigms of ribosome synthesis: Lessons learned from ribosomal proteins

J. Woolford, M. Gamalinda, 2015, Translation.

The Yeast Nucleolar Protein Nop4p Contains Four RNA Recognition Motifs Necessary for Ribosome Biogenesis*

J. Woolford, Chao Sun, 1997, The Journal of Biological Chemistry.

The final stages of spliceosome maturation require Spp2p that can interact with the DEAH box protein Prp2p and promote step 1 of splicing.

J. Woolford, J. Maddock, J. Roy, 1995, RNA.

The use of R-looping for structural gene identification and mRNA purification.

M. Rosbash, J. Woolford, John L. Woolford, 1979, Nucleic acids research.

Unraveling the influences of sequence and position on yeast uORF activity using massively parallel reporter systems and machine learning

J. Woolford, Gemma E. May, Joel McManus, 2021, bioRxiv.

Yeast polypeptide exit tunnel ribosomal proteins L17, L35 and L37 are necessary to recruit late-assembling factors required for 27SB pre-rRNA processing

J. Woolford, Jason Talkish, J. de la Cruz, 2012, Nucleic acids research.

rRNA Maturation in Yeast Cells Depleted of Large Ribosomal Subunit Proteins

J. Woolford, Tobias Braun, H. Tschochner, 2009, PloS one.

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.

T. Hughes, Shawna L. Hiley, J. Woolford, 2007, Genes & development.

The carboxy-terminal extension of yeast ribosomal protein S14 is necessary for maturation of 43S preribosomes.

J. Woolford, J. Jakovljevic, I. Léger-Silvestre, 2004, Molecular cell.

Depletion of yeast ribosomal proteins L16 or rp59 disrupts ribosome assembly

Y. Tsay, A. Paulovich, J. Woolford, 1990, The Journal of cell biology.

Ribosome assembly coming into focus

J. Woolford, S. Klinge, 2018, Nature Reviews Molecular Cell Biology.

The N-terminal extension of yeast ribosomal protein L8 is involved in two major remodeling events during late nuclear stages of 60S ribosomal subunit assembly

J. Woolford, N. Gao, B. Tutuncuoglu, 2016, RNA.

A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains

J. Woolford, J. Jakovljevic, M. Gamalinda, 2014, Genes & development.

Ribosomal proteins L7 and L8 function in concert with six A₃ assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunits.

J. Woolford, Jason Talkish, J. Jakovljevic, 2012, RNA.

Ribosomal proteins L 7 and L 8 function in concert with six A 3 assembly factors to propagate assembly of domains I and II of 25 S rRNA in yeast 60 S ribosomal subunits

J. Woolford, Jason Talkish, M. Gamalinda, 2012 .

Yeast ribosomal protein L1 is required for the stability of newly synthesized 5S rRNA and the assembly of 60S ribosomal subunits

Y. Tsay, A. Paulovich, J. Woolford, 1993, Molecular and cellular biology.

The nucleolus as a polarized coaxial cable in which the rDNA axis is surrounded by dynamic subunit-specific phases

J. Woolford, A. Tartakoff, Chun-Lun Ni, 2021, Current Biology.

Structural insights into assembly of the ribosomal nascent polypeptide exit tunnel

J. Woolford, N. Gao, Yu Li, 2020, Nature Communications.

Coupling of 5S RNP rotation with maturation of functional centers during large ribosomal subunit assembly

J. Woolford, N. Gao, B. Tutuncuoglu, 2020, Nature Communications.

Atomic modeling of the ITS2 ribosome assembly subcomplex from cryo‐EM together with mass spectrometry‐identified protein–protein crosslinks

Dan Tan, Meng-Qiu Dong, Ning Gao, 2017, Protein science : a publication of the Protein Society.

Disruption of ribosome assembly in yeast blocks cotranscriptional pre-rRNA processing and affects the global hierarchy of ribosome biogenesis

J. Strahler, P. Andrews, J. Woolford, 2016, RNA.

Role of the yeast Rrp1 protein in the dynamics of pre-ribosome maturation.

J. Woolford, Piyanun Harnpicharnchai, J. Jakovljevic, 2004, RNA.

DRS1 to DRS7, novel genes required for ribosome assembly and function in Saccharomyces cerevisiae

J. Woolford, T. Ripmaster, G. P. Vaughn, 1993, Molecular and cellular biology.

Deletion of L4 domains reveals insights into the importance of ribosomal protein extensions in eukaryotic ribosome assembly

J. Woolford, M. Gamalinda, 2014, RNA.

Involvement of lysine 270 and lysine 271 of yeast 5S rRNA binding protein in RNA binding and ribosome assembly.

J. Lee, J. Woolford, L. Yeh, 1996, Biochimica et biophysica acta.

Identification and nuclear localization of yeast pre-messenger RNA processing components: RNA2 and RNA3 proteins

J. Woolford, R. Last, 1986, The Journal of cell biology.

Assembly of ribosomes and spliceosomes: complex ribonucleoprotein machines.

J. Woolford, Jonathan P Staley, John L Woolford, 2009, Current opinion in cell biology.

Assembly of 60S ribosomal subunits is perturbed in temperature-sensitive yeast mutants defective in ribosomal protein L16

J. Woolford, M. Moritz, B. Pulaski, 1991, Molecular and cellular biology.

Assembly of60SRibosomal Subunits IsPerturbed inTemperature- Sensitive YeastMutants Defective inRibosomal Protein L16

J. Woolford, 1991 .

Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre‐rRNA processing

J. Strahler, P. Andrews, J. Woolford, 2011, The EMBO journal.

Interactions among Ytm1, Erb1, and Nop7 required for assembly of the Nop7-subcomplex in yeast preribosomes.

J. Woolford, J. Jakovljevic, E. Schleifman, 2008, Molecular biology of the cell.

Identification of the binding site of Rlp7 on assembling 60S ribosomal subunits in Saccharomyces cerevisiae

J. Woolford, C. J. McManus, Madhu Ramesh, 2013, RNA.

Interactions of yeast ribosomal protein rpS14 with RNA.

J. Woolford, P. Antúnez de Mayolo, 2003, Journal of molecular biology.

Ribosome Assembly Factors Pwp1 and Nop12 Are Important for Folding of 5.8S rRNA during Ribosome Biogenesis in Saccharomyces cerevisiae

J. Woolford, Jason Talkish, I. W. Campbell, 2014, Molecular and Cellular Biology.

Has1 regulates consecutive maturation and processing steps for assembly of 60S ribosomal subunits

J. Woolford, Jill A. Dembowski, B. Kuo, 2013, Nucleic acids research.

Has 1 regulates consecutive maturation and processing steps for assembly of 60 S ribosomal subunits

J. Woolford, Jill A. Dembowski, B. Kuo, 2013 .

Ebp2 and Brx1 function cooperatively in 60S ribosomal subunit assembly in Saccharomyces cerevisiae

J. Woolford, Jason Talkish, J. Jakovljevic, 2012, Nucleic acids research.

Ytm1, Nop7, and Erb1 Form a Complex Necessary for Maturation of Yeast 66S Preribosomes

J. Woolford, J. Jakovljevic, P. Harnpicharnchai, 2005, Molecular and Cellular Biology.

広島大学学術情報リポジトリ Hiroshima University Institutional Repository Title Ebp 2 and Brx 1 function cooperatively in 60 S ribosomal subunit assembly in Saccharomyces cerevisiae

J. Woolford, Jason Talkish, J. Jakovljevic, 2022 .

TIF4631 and TIF4632: two yeast genes encoding the high-molecular-weight subunits of the cap-binding protein complex (eukaryotic initiation factor 4F) contain an RNA recognition motif-like sequence and carry out an essential function

N. Sonenberg, J. Woolford, H. Trachsel, 1993, Molecular and cellular biology.

Identification of Genes That Function in the Biogenesis and Localization of Small Nucleolar RNAs in Saccharomyces cerevisiae

J. Woolford, M. Thiry, D. Lafontaine, 2008, Molecular and Cellular Biology.

Multiple genes encode the translation elongation factor EF-1 gamma in Saccharomyces cerevisiae

Terri Goss Kinzy, Tracy L. Ripmaster, John L. Woolford, 1994, Nucleic Acids Res..

The PRP31 gene encodes a novel protein required for pre-mRNA splicing in Saccharomyces cerevisiae.

J. Woolford, E. Weidenhammer, M. Singh, 1996, Nucleic acids research.

A hierarchical model for assembly of eukaryotic 60 S ribosomal

J. Woolford, J. Jakovljevic, M. Gamalinda, 2014 .

Six novel genes necessary for pre-mRNA splicing in Saccharomyces cerevisiae.

J. Woolford, J. Maddock, J. Roy, 1996, Nucleic acids research.

Molecular cloning and analysis of the CRY1 gene: a yeast ribosomal protein gene.

J. Woolford, J. Larkin, 1983, Nucleic acids research.

Sequence and genetic analysis of a dispensible 189 nucleotide snRNA from Saccharomyces cerevisiae.

J. Thompson, J. Woolford, M. Fournier, 1988, Nucleic acids research.

The Rea1 Tadpole Loses Its Tail

J. Woolford, Jason Talkish, 2009, Cell.

Structure and expression of the Saccharomyces cerevisiae CRY1 gene: a highly conserved ribosomal protein gene

J. Thompson, J. Woolford, J. Larkin, 1987, Molecular and cellular biology.

RNA splicing in lower eukaryotes.

J. Woolford, C. Peebles, 1992 .

Evaluating Joint Modeling of Yeast Biology Literature and Protein-Protein Interaction Networks

William W. Cohen, Kathryn Rivard, Ramnath Balasubramanyan, 2012, BioNLP@HLT-NAACL.

Yeast ribosome biogenesis factors Puf6 and Nog2 and ribosomal proteins uL2 and eL43 act in concert to facilitate the release of nascent large ribosomal subunits from the nucleolus

J. Woolford, Jelena Micic, Amber J Laperuta, 2023, Nucleic acids research.