A. Ngom

发表

Biofilm Image Segmentation Using Optimal Multi-level Thresholding

Alioune Ngom, Luis Rueda, Homero Urrutia, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

A novel approach for finding informative genes in ten subtypes of breast cancer

Alioune Ngom, Luis Rueda, Iman Rezaeian, 2015, 2015 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB).

Chapter 2 Combinatorial Evolutionary Methods in Wireless Mobile Computing

A. Ngom, G. Vidyarthi, 2018 .

Genetic Algorithm for the Jump Number Scheduling Problem

Alioune Ngom, A. Ngom, 1998 .

Spot Detection and Image Segmentation in DNA Microarray Data

L. Rueda, A. Ngom, Adnan Ali, 2005, Applied bioinformatics.

Non-Negative Matrix and Tensor Factorization Methods for Microarray Data Analysis

A. Ngom, Yifeng Li, 2010 .

2nd International Conference on Bio-inspired Models of Network, Information, and Computing Systems Home Authors Committees Keynote Speakers Title Author Abstract Self-organizing Mobile Surveillance Security Networks an Information Theoretical Approach for Molecular Communication (invited Paper) Eval

Zhejiang, Shenyang, Benko, 2007 .

Clustering Time-Series Gene Expression Data with Unequal Time Intervals

Ataul Bari, Alioune Ngom, Luis Rueda, 2008, Trans. Comp. Sys. Biology.

Clustering microarray time-series data using expectation maximization and multiple profile alignment

L. Rueda, A. Ngom, C. Burden, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine Workshop.

A Survey on “ Integrated Channel-assignment and Power-control in Wireless Ad Hoc Networks

R. Frost, A. Ngom, Nowsher. Ali, 2005 .

An Integrative Approach for Identification of Network Biomarkers in Breast Cancer Subtypes

L. Rueda, A. Ngom, Forough Firoozbakht, 2016 .

Synthesis of Multiple-Valued Circuits by Neural Networks

Ivan Stojmenovic, Alioune Ngom, I. Stojmenovic, 2005, Handbook of Bioinspired Algorithms and Applications.

Combinatorial Evolutionary Methods in Wireless Mobile Computing

Ivan Stojmenovic, Alioune Ngom, Geetali Dutta. Vidyarthi, 2006 .

Minimal siRNA set cover heuristic for gene family knockdown

L. Rueda, A. Ngom, Xiaoguang Li, 2008 .

Predicting Outcomes of Hormone and Chemotherapy in the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) Study by Biochemically-inspired Machine Learning

Alioune Ngom, Luis Rueda, Dimo Angelov, 2017, F1000Research.

Biolm Image Analysis: Automatic Segmentation Methods and Applications

Luis Rueda, Dario Rojas, Homero Urrutia, 2016 .

On Finding the Best Parameters of Fuzzy k-Means for Clustering Microarray Data

Alioune Ngom, Luis Rueda, Wei Yang, 2007, J. Multiple Valued Log. Soft Comput..

Computationally repurposing drugs for breast cancer subtypes using a network-based approach

L. Rueda, A. Ngom, Forough Firoozbakht, 2021, BMC Bioinformatics.

at UWindsor Spot Detection and Image Segmentation in DNA Microarray Data

L. Rueda, A. Ngom, Adnan Ali, 2015 .

Sparse representation approaches for the classification of high-dimensional biological data

Alioune Ngom, Yifeng Li, A. Ngom, 2012, 2012 IEEE International Conference on Bioinformatics and Biomedicine.

Genetic algorithm based scheduler for computational grids

Alioune Ngom, Robert D. Kent, Mona Aggarwal, 2005, 19th International Symposium on High Performance Computing Systems and Applications (HPCS'05).

A review on machine learning principles for multi-view biological data integration

Alioune Ngom, Fang-Xiang Wu, Yifeng Li, 2016, Briefings Bioinform..

Data integration in machine learning

Alioune Ngom, Yifeng Li, A. Ngom, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

The relative vertex clustering value - a new criterion for the fast discovery of functional modules in protein interaction networks

Zina M. Ibrahim, Alioune Ngom, A. Ngom, 2015, BMC Bioinformatics.

A Fast Agglomerative Community Detection Method for Protein Complex Discovery in Protein Interaction Networks

Alioune Ngom, Mohammad Shamsur Rahman, A. Ngom, 2013, PRIB.

FAC-PIN: Fast agglomerative clustering method for functional modules and protein complex identification in PINs

Alioune Ngom, Mohammad Shamsur Rahman, A. Ngom, 2013, 2013 IEEE 3rd International Conference on Computational Advances in Bio and medical Sciences (ICCABS).

A novel approach to identify subtype-specific network biomarkers of breast cancer survivability

L. Rueda, A. Ngom, A. Alkhateeb, 2020, Network Modeling Analysis in Health Informatics and Bioinformatics.

The Max-Min High-Order Dynamic Bayesian Network for Learning Gene Regulatory Networks with Time-Delayed Regulations

Alioune Ngom, Jie Zheng, Yifeng Li, 2016, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Predicting Small Molecule Potency to Inhibit Estrogen Receptors using Machine Learning and Deep Learning Approaches

Alioune Ngom, Hetal Rahul Rajpura, A. Ngom, 2018, 2018 International Conference on Artificial Intelligence and Data Processing (IDAP).

A new compact set of biomarkers for distinguishing among ten breast cancer subtypes

Alioune Ngom, Luis Rueda, Iman Rezaeian, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A network-based drug repurposing method via non-negative matrix factorization

Seyedeh Shaghayegh Sadeghi, A. Ngom, Jianguo Lu, 2021, Bioinform..

Drug target interaction predictions using PU- Leaming under different experimental setting for four formulations namely known drug target pair prediction, drug prediction, target prediction and unknown drug target pair prediction

Alioune Ngom, Hetal Rahul Rajpura, A. Ngom, 2018, 2018 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB).

Multiple gene expression profile alignment for microarray time-series data clustering

Alioune Ngom, Luis Rueda, Conrad J. Burden, 2010, Bioinform..

Alignment-based versus variation-based transformation methods for clustering microarray time-series data

Alioune Ngom, Luis Rueda, Yifeng Li, 2010, BCB '10.

Alignment versus variation methods for clustering microarray time-series data

Alioune Ngom, Luis Rueda, Yifeng Li, 2010, IEEE Congress on Evolutionary Computation.

Pattern classification using a new border identification paradigm: The nearest border technique

B. John Oommen, Alioune Ngom, Luis Rueda, 2015, Neurocomputing.

A New Paradigm for Pattern Classification: Nearest Border Techniques

B. John Oommen, Alioune Ngom, Luis Rueda, 2013, Australasian Conference on Artificial Intelligence.

Nonnegative Least-Squares Methods for the Classification of High-Dimensional Biological Data

Alioune Ngom, Yifeng Li, A. Ngom, 2013, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A novel approach to identify subtype-specific network biomarkers of breast cancer survivability

Luis Rueda, Abedalrhman Alkhateeb, Alioune Ngom, 2020, Network Modeling Analysis in Health Informatics and Bioinformatics.

A Machine Learning Approach for Identifying Gene Biomarkers Guiding the Treatment of Breast Cancer

Alioune Ngom, Luis Rueda, Waguih ElMaraghy, 2019, Front. Genet..

Facile whole mitochondrial genome resequencing from nipple aspirate fluid using MitoChip v2.0

A. Ngom, P. Wagner, S. Srivastava, 2008, BMC Cancer.

Non-negative matrix and tensor factorization based classification of clinical microarray gene expression data

Alioune Ngom, Yifeng Li, A. Ngom, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Optimal decoding and minimal length for the non-unique oligonucleotide probe selection problem

Laleh Soltan Ghoraie, Lili Wang, Alioune Ngom, 2010, Neurocomputing.

Identification of the Treatment Survivability Gene Biomarkers of Breast Cancer Patients via a Tree-Based Approach

Alioune Ngom, Luis Rueda, Waguih ElMaraghy, 2018, IWBBIO.

Identifying Informative Genes for Prediction of Breast Cancer Subtypes

Alioune Ngom, Luis Rueda, Yifeng Li, 2013, PRIB.

The max-min high-order dynamic Bayesian network learning for identifying gene regulatory networks from time-series microarray data

Alioune Ngom, Yifeng Li, A. Ngom, 2013, 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB).

Predicting Outcomes of Hormone and Chemotherapy in the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) Study by Biochemically-inspired Machine Learning.

Alioune Ngom, Luis Rueda, Dimo Angelov, 2016, F1000Research.

NUCLEAR: AN EFFICIENT METHOD FOR MINING FREQUENT ITEMSETS BASED ON KERNELS AND EXTENDABLE SETS

Alioune Ngom, Huy Quang Pham, Duc Tran, 2019, Computer Science & Information Technology (CS & IT ).

The non-negative matrix factorization toolbox for biological data mining

Alioune Ngom, Yifeng Li, A. Ngom, 2013, Source Code for Biology and Medicine.

Classification approach based on non-negative least squares

Alioune Ngom, Yifeng Li, A. Ngom, 2013, Neurocomputing.

Prediction of Calmodulin-Binding Proteins Using Short-Linear Motifs

Alioune Ngom, Luis Rueda, Mina Maleki, 2017, IWBBIO.

A simulated annealing approach to find the optimal parameters for fuzzy clustering microarray data

Alioune Ngom, Luis Rueda, Wei Yang, 2005, XXV International Conference of the Chilean Computer Science Society (SCCC'05).

Missing value imputation methods for gene-sample-time microarray data analysis

Alioune Ngom, Luis Rueda, Yifeng Li, 2010, 2010 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology.

PAFS - An efficient method for classifier-specific feature selection

Alioune Ngom, Luis Rueda, Pham Quang Huy, 2016, 2016 IEEE Symposium Series on Computational Intelligence (SSCI).

A dynamic qualitative probabilistic network approach for extracting gene regulatory network motifs

Zina M. Ibrahim, Ahmed Y. Tawfik, Alioune Ngom, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Qualitative Motif Detection in Gene Regulatory Networks

Zina M. Ibrahim, Ahmed Y. Tawfik, Alioune Ngom, 2009, 2009 IEEE International Conference on Bioinformatics and Biomedicine.

Blood Cell Types Classification Using CNN

Ishpreet Singh, Alioune Ngom, Narinder Pal Singh, 2020, IWBBIO.

An Integrative Approach for Identifying Network Biomarkers of Breast Cancer Subtypes Using Genomic, Interactomic, and Transcriptomic Data

Luis Rueda, Iman Rezaeian, Alioune Ngom, 2017, J. Comput. Biol..

Qualitative Hidden Markov Models for Classifying Gene Expression Data

Zina M. Ibrahim, Ahmed Y. Tawfik, Alioune Ngom, 2008, SGAI Conf..

Versatile sparse matrix factorization: Theory and applications

Alioune Ngom, Yifeng Li, A. Ngom, 2014, Neurocomputing.

Versatile Sparse Matrix Factorization and Its Applications in High-Dimensional Biological Data Analysis

Alioune Ngom, Yifeng Li, A. Ngom, 2013, PRIB.

A Framework of Gene Subset Selection Using Multiobjective Evolutionary Algorithm

Alioune Ngom, Luis Rueda, Yifeng Li, 2012, PRIB.

A Novel Approach for Identifying Relevant Genes for Breast Cancer Survivability on Specific Therapies

Luis Rueda, Waguih ElMaraghy, Huy Quang Pham, 2018, Evolutionary bioinformatics online.

Integrated Hybrid Channel Assignment and Distributed Power Control in Wireless Cellular Networks using Evolution Strategy

A. Jaekel, T. Farid, A. Ngom, 2007, 2007 IEEE Symposium on Computational Intelligence in Image and Signal Processing.

DeePSLiM: A Deep Learning Approach to Identify Predictive Short-linear Motifs for Protein Sequence Classification

Seyedeh Shaghayegh Sadeghi, L. Rueda, A. Ngom, 2022, 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB).

DDIPred: Graph Convolutional Network-Based Drug-drug Interactions Prediction Using Drug Chemical Structure Embedding

Seyedeh Shaghayegh Sadeghi, A. Ngom, 2022, 2022 IEEE Conference on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB).

Efficient Optimal Multi-level Thresholding for Biofilm Image Segmentation

Alioune Ngom, Luis Rueda, Homero Urrutia, 2009, PRIB.

Gene Regulatory Network Identification with Qualitative Probabilistic Networks

Zina M. Ibrahim, Ahmed Y. Tawfik, Alioune Ngom, 2013 .

Transactions on Computational Systems Biology X

C. Priami, A. Ngom, Falko Dressler, 2008, Trans. Computational Systems Biology.

A Novel Recursive Feature Subset Selection Algorithm

Luis Rueda, Alioune Ngom, Amirali Jafarian, 2011, 2011 IEEE 11th International Conference on Bioinformatics and Bioengineering.

The non-negative matrix factorization toolbox for biological data mining

A. Ngom, Yifeng Li, 2013, Source Code for Biology and Medicine.