J. Sibbesen

发表

Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

Lars Bolund, Bent Petersen, Christian N. S. Pedersen, 2017, Nature.

Coalescent Inference Using Serially Sampled, High-Throughput Sequencing Data from Intrahost HIV Infection

Paul A. Jenkins, J. Hein, O. Pybus, 2015, Genetics.

Coalescent inference using serially sampled, high-throughput sequencing data from intra-host HIV infection

Paul A. Jenkins, J. Hein, O. Pybus, 2015, bioRxiv.

Bayesian transcriptome assembly

Anders Krogh, Jonas Andreas Sibbesen, Lasse Maretty, 2014, Genome Biology.

Universitet Next-generation biology

L. Maretty, J. Sibbesen, A. Albrechtsen, 2018 .

Next-generation biology: Sequencing and data analysis approaches for non-model organisms.

Anders Albrechtsen, Jonas Andreas Sibbesen, Lasse Maretty, 2016, Marine genomics.

Genotyping common, large structural variations in 5,202 genomes using pangenomes, the Giraffe mapper, and the vg toolkit

Jordan M. Eizenga, Adam M. Novak, D. Haussler, 2020, bioRxiv.

A draft human pangenome reference

William T. Harvey, Jordan M. Eizenga, Adam M. Novak, 2022, bioRxiv.

Next-generation biology: Sequencing and data analysis approaches for non-model organisms.

L. Maretty, J. Sibbesen, A. Albrechtsen, 2016, Marine genomics.

Pangenome Graphs.

Jordan M. Eizenga, Adam M. Novak, Josiah D. Seaman, 2020, Annual review of genomics and human genetics.

Haplotype-aware pantranscriptome analyses using spliced pangenome graphs

Jordan M. Eizenga, Adam M. Novak, B. Paten, 2022, bioRxiv.

University of Birmingham Next-generation biology

L. Maretty, J. Sibbesen, A. Albrechtsen, 2016 .

METHOD Open Access

A. Krogh, L. Maretty, J. Sibbesen, 2014 .

A strategy for building and using a human reference pangenome

Jordan M. Eizenga, Adam M. Novak, Michael F. Lin, 2021, F1000Research.

A strategy for building and using a human reference pangenome.

Alan Cleary, Benedict Paten, Shilpa Garg, 2019, F1000Research.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

Bent Petersen, Patrick F. Sullivan, Christian N. S. Pedersen, 2018, BMC Bioinformatics.

Combined use of Oxford Nanopore and Illumina sequencing yields insights into soybean structural variation biology

J. Sibbesen, F. Belzile, D. Torkamaneh, 2021, bioRxiv.

Genotyping structural variants in pangenome graphs using the vg toolkit

Glenn Hickey, Benedict Paten, Eric T. Dawson, 2019, Genome Biology.

Pangenomics enables genotyping of known structural variants in 5202 diverse genomes

Jordan M. Eizenga, Adam M. Novak, D. Haussler, 2021, Science.

Accurate genotyping across variant classes and lengths using variant graphs

A. Krogh, L. Maretty, J. Sibbesen, 2018, Nature Genetics.

Accurate genotyping across variant classes and lengths using variant graphs

Anders Krogh, Jonas Andreas Sibbesen, Lasse Maretty, 2018, Nature Genetics.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

John van Beusekom, Anders E. Halager, P. Sullivan, 2018, BMC Bioinform..

RNA Sequencing of Trigeminal Ganglia in Rattus Norvegicus after Glyceryl Trinitrate Infusion with Relevance to Migraine

J. Olesen, A. Krogh, L. Maretty, 2016, PloS one.

Increased mutation and gene conversion within human segmental duplications

William T. Harvey, Hanlee P. Ji, Omar E. Cornejo, 2023, Nature.

Next-generation biology: Sequencing and data analysis approaches for non-model organisms.

L. Maretty, J. Sibbesen, A. Albrechtsen, 2016, Marine genomics.

Bayesian transcriptome assembly

A. Krogh, L. Maretty, J. Sibbesen, 2014, Genome Biology.

University of Birmingham Next-generation biology

L. Maretty, J. Sibbesen, A. Albrechtsen, 2016 .

Combined use of Oxford Nanopore and Illumina sequencing yields insights into soybean structural variation biology

J. Sibbesen, D. Torkamaneh, F. Belzile, 2022, BMC Biology.

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

William T. Harvey, Hanlee P. Ji, Dmitri S. Pavlichin, 2023, Cell Reports Methods.

METHOD Open Access

David Z. Chen, M. Gerstein, M. Rubin, 2014 .

METHOD Open Access

A. Ben-Hur, L. Maretty, J. Sibbesen, 2014 .

A scaling normalization method for differential expression analysis of RNA-seq data

M. Robinson, A. Oshlack, L. Maretty, 2010, Genome Biology.

Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

Anders E. Halager, P. Sullivan, A. Krogh, 2017, Nature.

Accurate genotyping across variant classes and lengths using variant graphs

A. Krogh, L. Maretty, J. Sibbesen, 2018, Nature Genetics.

METHOD Open Access

S. Orkin, Guocheng Yuan, L. Maretty, 2014 .

METHOD Open Access

L. Maretty, J. Sibbesen, Anders Krogh, 2014 .

Bayesian transcriptome assembly

A. Krogh, L. Maretty, J. Sibbesen, 2014, Genome Biology.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

Anders E. Halager, P. Sullivan, A. Krogh, 2018, BMC Bioinformatics.