Siyang Liu

发表

Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

Lars Bolund, Bent Petersen, Christian N. S. Pedersen, 2017, Nature.

Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a population scale

A. Krogh, Jun Wang, Siyang Liu, 2015, GigaScience.

How robust are cross-population signatures of polygenic adaptation in humans?

Alicia R. Martin, Fernando Racimo, Xin Jin, 2020, bioRxiv.

Genomic Analyses from Non-invasive Prenatal Testing Reveal Genetic Associations, Patterns of Viral Infections, and Chinese Population History

J. Shendure, A. Krogh, Huanming Yang, 2018, Cell.

Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios

Jakob Grove, Anders D. Børglum, Xun Xu, 2015, Nature Communications.

The genetic architecture of sporadic and multiple consecutive miscarriage

R. Mägi, A. Morris, D. Lawlor, 2020, Nature Communications.

The genetic architecture of sporadic and recurrent miscarriage

R. Mägi, A. Morris, D. Lawlor, 2019, bioRxiv.

De novo assembly of a haplotype-resolved human genome

Jian Wang, Xun Xu, Lars Bolund, 2015, Nature Biotechnology.

The Association of Thyroid Nodules With Blood Trace Elements Identified in a Cross-Section Study

Jie Shen, Siyang Liu, Lingling Liu, 2022, Frontiers in Nutrition.

CMDB: the comprehensive population genome variation database of China

Xin Jin, Siyang Liu, Shujia Huang, 2022, Nucleic Acids Res..

Initial whole-genome sequencing and analysis of the host genetic contribution to COVID-19 severity and susceptibility

Huanming Yang, Jian Wang, Xin Jin, 2020, Cell discovery.

Low pass genomes of 141,431 Chinese reveal patterns of viral infection, novel phenotypic associations, and the genetic history of China

J. Shendure, A. Krogh, Huanming Yang, 2019 .

Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis

Fei Gao, Huanming Yang, Mingyuan Liu, 2012, Genome Biology.

Trans-ethnic genome-wide association study of severe COVID-19

Xihong Lin, Xin Jin, Chaolong Wang, 2021, Communications Biology.

A Chinese host genetic study discovered IFNs and causality of laboratory traits on COVID-19 severity

Huanming Yang, Jian Wang, Xin Jin, 2021, iScience.

Stochastic anomaly of methylome but persistent SRY hypermethylation in disorder of sex development in canine somatic cell nuclear transfer

Huanming Yang, Siyang Liu, Shujia Huang, 2016, Scientific Reports.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

Bent Petersen, Patrick F. Sullivan, Christian N. S. Pedersen, 2018, BMC Bioinformatics.

High-throughput sequencing of methylated cytosine enriched by modification-dependent restriction endonuclease MspJI

Siyang Liu, Jihua Sun, Junwen Wang, 2013, BMC Genetics.

Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies.

Shujia Huang, Jihua Sun, Li Wang, 2012, Journal of biotechnology.

Clustering of Cancer Cell Lines Using A Promoter- Targeted Liquid Hybridization Capture-Based Bisulfite Sequencing Approach

Huanming Yang, Xiuqing Zhang, Hui Jiang, 2015, Technology in cancer research & treatment.

Genomic epidemiology of SARS-CoV-2 in the UAE reveals novel virus mutation, patterns of co-infection and tissue specific host immune response

Junhua Li, Huanming Yang, Jian Wang, 2021, Scientific Reports.

Identification of susceptibility genes loci associated with type 2 diabetes

Siyang Liu, Haiyun Liu, F. Deng, 2010, Wuhan University Journal of Natural Sciences.

Large-scale Inference of Population Structure in Presence of Missingness using PCA

Anders Albrechtsen, Jonas Meisner, Siyang Liu, 2020, bioRxiv.

Genome-wide association study of COVID-19 severity among the Chinese population

Xin Jin, F. He, Siyang Liu, 2021, Cell discovery.

IFIH1 polymorphisms are significantly associated with type 1 diabetes and IFIH1 gene expression in peripheral blood mononuclear cells.

M. Rewers, J. She, A. Montemari, 2008, Human molecular genetics.

Genomic epidemiology of SARS-CoV-2 in the United Arab Emirates reveals novel virus mutation, patterns of co-infection and tissue specific host responses

Junhua Li, Huanming Yang, Jian Wang, 2021, medRxiv.

DNA methylation and mRNA and microRNA expression of SLE CD4+ T cells correlate with disease phenotype.

Honglong Wu, Siyang Liu, T. Chan, 2014, Journal of autoimmunity.

Deep sequencing of 1320 genes reveals the landscape of protein-truncating variants and their contribution to psoriasis in 19,973 Chinese individuals

L. Fang, Xin Jin, Yong Zhang, 2021, Genome research.

Initial whole-genome sequencing and analysis of the host genetic contribution to COVID-19 severity and susceptibility

Huanming Yang, Jian Wang, Xin Jin, 2020, Cell Discovery.

Genetically Dependent ERBB3 Expression Modulates Antigen Presenting Cell Function and Type 1 Diabetes Risk

J. She, Siyang Liu, Ping Yang, 2010, PloS one.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

John van Beusekom, Anders E. Halager, P. Sullivan, 2018, BMC Bioinform..

Estimation of cell-free fetal DNA fraction from maternal plasma based on linkage disequilibrium information

Xin Jin, Siyang Liu, Yu Lin, 2021, npj Genomic Medicine.

Estimation of cell-free fetal DNA fraction from maternal plasma based on linkage disequilibrium information

Xin Jin, Siyang Liu, Haiqiang Zhang, 2021, NPJ genomic medicine.

The STROMICS genome study: deep whole-genome sequencing and analysis of 10K Chinese patients with ischemic stroke reveal complex genetic and phenotypic interplay

Hao Li, Xin Jin, Chaolong Wang, 2023, Cell discovery.

IFIH 1 polymorphisms are significantly associated with type 1 diabetes and IFIH 1 gene expression in peripheral blood mononuclear cells

M. Rewers, J. She, A. Montemari, 2008 .

Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a population scale

A. Krogh, Jun Wang, Siyang Liu, 2015, GigaScience.

Initial Study of Human Genetic Contribution to COVID-19 Severity and Susceptibility

Jian Wang, Xin Jin, Fang Wang, 2020, medRxiv.

Seroprevalence of Varicella Zoster virus in China: an age-stratifed systematic review and meta-analysis

Siyang Liu, Minxin Zhang, Zhengwei Li, 2019, medRxiv.

Genomic Analyses from Non-invasive Prenatal Testing Reveal Genetic Associations, Patterns of Viral Infections, and Chinese Population History

J. Shendure, A. Krogh, Huanming Yang, 2018, Cell.

A Chinese host genetic study discovered type I interferons and causality of cholesterol levels and WBC counts on COVID-19 severity

Xin Jin, Y. Shan, X. Zhu, 2021, medRxiv.

Sequencing and de novo assembly of 150 genomes from Denmark as a population reference

Anders E. Halager, P. Sullivan, A. Krogh, 2017, Nature.

Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies.

Xiuqing Zhang, Honglong Wu, Ning Li, 2012, Journal of biotechnology.

Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios

Anders E. Halager, P. Sullivan, A. Krogh, 2018, BMC Bioinformatics.