F. McCutchan

D. Burke, J. Carr, F. McCutchan, 1996, Journal of acquired immune deficiency syndromes and human retrovirology : official publication of the International Retrovirology Association.

Diversity of envelope glycoprotein from human immunodeficiency virus type 1 of recent seroconverters in Thailand.

J. Carr, M. Robb, D. Birx, 2000, AIDS research and human retroviruses.

Highly complex neutralization determinants on a monophyletic lineage of newly transmitted subtype C HIV-1 Env clones from India.

S Gnanakaran, Lynn Morris, Tanmoy Bhattacharya, 2009, Virology.

Diversity of the human immunodeficiency virus type 1 envelope glycoprotein in San Francisco Men's Health Study participants.

J. Carr, M. Salminen, E. Sanders-Buell, 1998, AIDS research and human retroviruses.

A Recent Outbreak of Human Immunodeficiency Virus Type 1 Infection in Southern China Was Initiated by Two Highly Homogeneous, Geographically Separated Strains, Circulating Recombinant Form AE and a Novel BC Recombinant

Jie Chen, Shenghan Lai, Chris Beyrer, 2000, Journal of Virology.

Maintaining low HIV type 1 env genetic diversity among injection drug users infected with a B/C recombinant and CRF01_AE HIV type 1 in southern China.

W. Liu, S. Lai, F. McCutchan, 2002, AIDS research and human retroviruses.

Rapid dissemination of a novel B/C recombinant HIV-1 among injection drug users in southern China.

F. McCutchan, X. Yu, F. Liang, 2001, AIDS.

Molecular Epidemiology of HIV in Asia and the Pacific

D. Birx, F. McCutchan, S. Tovanabutra, 2004 .

Recovery of virtually full-length HIV-1 provirus of diverse subtypes from primary virus cultures using the polymerase chain reaction.

D. Burke, J. Carr, M. Salminen, 1995, Virology.

Characterization of novel recombinant HIV-1 genomes using the branching index.

Jan Albert, Mika Salminen, S. Ray, 2003, Virology.

Phylogenetic analysis of gag genes from 70 international HIV‐1 isolates provides evidence for multiple genotypes

D. Burke, M. Peeters, E. Sanders-Buell, 1993, AIDS.

Biologic and Genetic Characterization of a Panel of 60 Human Immunodeficiency Virus Type 1 Isolates, Representing Clades A, B, C, D, CRF01_AE, and CRF02_AG, for the Development and Assessment of Candidate Vaccines

E. Sanders-Buell, D. Birx, F. McCutchan, 2005, Journal of Virology.

Development of Calibrated Viral Load Standards for Group M Subtypes of Human Immunodeficiency Virus Type 1 and Performance of an Improved AMPLICOR HIV-1 MONITOR Test with Isolates of Diverse Subtypes

J. Mascola, L. Jagodzinski, J. Carr, 1999, Journal of Clinical Microbiology.

Relatively Low HIV Infection Rates in Rural Uganda, but with High Potential for a Rise: A Cohort Study in Kayunga District, Uganda

M. Robb, F. McCutchan, D. Guwatudde, 2009, PloS one.

Full-length genome characterization of HIV type 1 subtype C isolates from two slow-progressing perinatally infected siblings in South Africa.

F. McCutchan, L. Morris, M. Papathanasopoulos, 2003, AIDS research and human retroviruses.

Understanding the genetic diversity of HIV-1.

F. McCutchan, F E McCutchan, 2000, AIDS.

Brief report: primary infection with zidovudine-resistant human immunodeficiency virus type 1.

F. McCutchan, H. Balfour, D. Mayers, 1993, The New England journal of medicine.

F. McCutchan, D. Birx, M. Janini, 2001, Journal of Virology.

Infectious Molecular Clones with the Nonhomologous Dimer Initiation Sequences Found in Different Subtypes of Human Immunodeficiency Virus Type 1 Can Recombine and Initiate a Spreading Infection In Vitro

D. Gotte, J. Carr, M. Salminen, 1998, Journal of Virology.

Recent advances in the characterization of HIV-1 neutralization assays for standardized evaluation of the antibody response to infection and vaccination.

David C Montefiori, Susan Zolla-Pazner, Nelson L Michael, 2008, Virology.

Higher HIV-1 Incidence and Genetic Complexity Along Main Roads in Rakai District, Uganda

N. Sewankambo, M. Robb, D. Birx, 2006, Journal of acquired immune deficiency syndromes.

Two antigenically distinct subtypes of human immunodeficiency virus type 1: viral genotype predicts neutralization serotype.

J. Mascola, D. Burke, F. McCutchan, 1994, The Journal of infectious diseases.

The Number and Complexity of Pure and Recombinant HIV-1 Strains Observed within Incident Infections during the HIV and Malaria Cohort Study Conducted in Kericho, Kenya, from 2003 to 2006

Jerome H. Kim, E. Sanders-Buell, M. Robb, 2015, PLoS ONE.

A human monoclonal antibody to a complex epitope in the V3 region of gp120 of human immunodeficiency virus type 1 has broad reactivity within and outside clade B

A. Trkola, B. Korber, J. Moore, 1995, Journal of virology.

HIV-1 genetic diversity and compartmentalization in mother/infant pairs infected with CRF01_AE

Merlin L Robb, Sodsai Tovanabutra, M. Robb, 2007, AIDS.

Impact of Clade, Geography, and Age of the Epidemic on HIV-1 Neutralization by Antibodies

Jerome H. Kim, A. Lapedes, B. Korber, 2014, Journal of Virology.

Evaluation of aldrithiol-2-inactivated preparations of HIV type 1 subtypes A, B, and D as reagents to monitor T cell responses.

J. Lifson, M. Robb, D. Birx, 2007, AIDS research and human retroviruses.

Naturally acquired simian retrovirus infections in central African hunters

W. Heneine, D. Burke, U. Tamoufé, 2004, The Lancet.

Genetic subtypes of HIV-1

J. Mascola, D. Burke, M. Peeters, 1993 .

CD8 T-Cell Recognition of Multiple Epitopes within Specific Gag Regions Is Associated with Maintenance of a Low Steady-State Viremia in Human Immunodeficiency Virus Type 1-Seropositive Patients

M. Hoelscher, F. McCutchan, A. Meyerhans, 2006, Journal of Virology.

Implications of HIV variability for transmission: scientific and policy issues. Expert Group of the Joint United Nations Programme on HIV/AIDS.

D. Burke, G. Pauli, R. Anderson, 1997, AIDS.

Diverse BF recombinants have spread widely since the introduction of HIV-1 into South America

J. Carr, D. Birx, F. McCutchan, 2001, AIDS.

Molecular Epidemiology of HIV Type 1 in Ecuador, Peru, Bolivia, Uruguay, and Argentina.

J. Carr, M. Hoelscher, M. Robb, 2002, AIDS research and human retroviruses.

Forty-one near full-length HIV-1 sequences from Kenya reveal an epidemic of subtype A and A-containing recombinants

U. Alam, J. Carr, W. Dowling, 2002, AIDS.

Mother-to-child HIV type 1 transmission in Argentina: BF recombinants have predominated in infected children since the mid-1980s.

J. Carr, F. McCutchan, P. Martínez, 2002, AIDS research and human retroviruses.

Diversity of the envelope glycoprotein among human immunodeficiency virus type 1 isolates of clade E from Asia and Africa

J. Mascola, D. Burke, M. Kieny, 1996, Journal of virology.

Distinct Human Immunodeficiency Virus Type 1 Subtype A Virus Circulating in West Africa: Sub-Subtype A3

F. McCutchan, S. Mboup, J. Sankalé, 2004, Journal of Virology.

Virtually full-length subtype F and F/D recombinant HIV-1 from Africa and South America.

D. Gotte, J. Carr, M. Salminen, 2000, Virology.

Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple

D. Gotte, P. Sharp, D. Burke, 1997, Journal of virology.

biologic outcome of an epitope-specific CD 8 T-cell response Minor viral and host genetic polymorphisms can dramatically impact the

R. Koup, D. Douek, D. Ambrozak, 2011 .

Minor viral and host genetic polymorphisms can dramatically impact the biologic outcome of an epitope-specific CD8 T-cell response.

R. Koup, D. Douek, D. Ambrozak, 2009, Blood.

HLA-A and -B allele expression and ability to develop anti-Gag cross-clade responses in subtype C HIV-1-infected Ethiopians.

S. Osmanov, M. E. Harris, D. Birx, 2004, Human immunology.

Detection of high frequencies of HIV-1 cross-subtype reactive CD8 T lymphocytes in the peripheral blood of HIV-1-infected Kenyans

U. Alam, J. Carr, W. Dowling, 2003, AIDS.

Tiered Categorization of a Diverse Panel of HIV-1 Env Pseudoviruses for Assessment of Neutralizing Antibodies

Holly Janes, David C Montefiori, Peter B Gilbert, 2009, Journal of Virology.

HIV-1 recombinants with multiple parental strains in low-prevalence, remote regions of Cameroon: Evolutionary relics?

D. Burke, U. Tamoufé, N. Wolfe, 2010, Retrovirology.

Viral and Host Factors Associated With the HIV-1 Viral Load Setpoint in Adults From Mbeya Region, Tanzania

Jerome H. Kim, M. Hoelscher, M. Robb, 2010, Journal of acquired immune deficiency syndromes.

A new circulating recombinant form, CRF15_01B, reinforces the linkage between IDU and heterosexual epidemics in Thailand.

J. Carr, M. Robb, D. Birx, 2003, AIDS research and human retroviruses.

Among 46 near full length HIV type 1 genome sequences from Rakai District, Uganda, subtype D and AD recombinants predominate.

Noah Kiwanuka, Merlin L Robb, Tom Lutalo, 2002, AIDS research and human retroviruses.

HIV-1 MN Env 15-mer peptides better detect HIV-1 specific CD8 T cell responses compared with consensus subtypes B and M group 15-mer peptides

L. Jagodzinski, D. Birx, F. McCutchan, 2005, AIDS.

Immunodominance and cross-reactivity of B5703-restricted CD8 T lymphocytes from HIV type 1 subtype C-infected Ethiopians.

M. E. Harris, D. Birx, F. McCutchan, 2005, AIDS research and human retroviruses.

Viral Linkage in HIV-1 Seroconverters and Their Partners in an HIV-1 Prevention Clinical Trial

J. Mullins, J. Baeten, T. Leitner, 2011, PloS one.

In-Depth Analysis of a Heterosexually Acquired Human Immunodeficiency Virus Type 1 Superinfection: Evolution, Temporal Fluctuation, and Intercompartment Dynamics from the Seronegative Window Period through 30 Months Postinfection

F. E. McCutchan, L. Jagodzinski, M. Hoelscher, 2005, Journal of Virology.

HIV diversity, molecular epidemiology, and the role of recombination

F. McCutchan, G. Kijak, 2005, Current infectious disease reports.

HIV-1 envelope pseudotyped viral vectors and infectious molecular clones expressing the same envelope glycoprotein have a similar neutralization phenotype, but culture in peripheral blood mononuclear cells is associated with decreased neutralization sensitivity.

J. Mascola, S. Zolla-Pazner, J. Lifson, 2005, Virology.

Origin and Epidemiological History of HIV-1 CRF14_BG

N. Taveira, F. McCutchan, R. Camacho, 2011, PloS one.

Effect of human immunodeficiency virus Type 1 (HIV-1) subtype on disease progression in persons from Rakai, Uganda, with incident HIV-1 infection.

Oliver Laeyendecker, Noah Kiwanuka, Michael Eller, 2008, The Journal of infectious diseases.

Frequency of HIV type 1 dual infection and HIV diversity: analysis of low- and high-risk populations in Mbeya Region, Tanzania.

M. Hoelscher, D. Birx, F. McCutchan, 2006, AIDS research and human retroviruses.

The changing molecular epidemiology of HIV type 1 among northern Thai drug users, 1999 to 2002.

M. Robb, D. Birx, F. McCutchan, 2004, AIDS Research and Human Retroviruses.

Simplified Strategy for Detection of Recombinant Human Immunodeficiency Virus Type 1 Group M Isolates bygag/env Heteroduplex Mobility Assay

S. Coppens, J. Carr, M. Salminen, 2000, Journal of Virology.

Simplified strategy for detection of recombinant human immunodeficiency virus type 1 group M isolates by gag/env heteroduplex mobility assay. Study Group on Heterogeneity of HIV Epidemics in African Cities.

S. Coppens, J. Carr, M. Salminen, 2000, Journal of virology.

Full-length genome analysis of HIV-1 subtype C utilizing CXCR4 and intersubtype recombinants isolated in South Africa.

W. Dowling, D. Birx, F. McCutchan, 2002, AIDS research and human retroviruses.

Global epidemiology of HIV

F. McCutchan, Francine E McCutchan, 2006, Journal of medical virology.

Genetic variants of HIV-1 in Thailand.

D. Burke, F. McCutchan, P. Phanuphak, 1992, AIDS research and human retroviruses.

Subtype G and multiple forms of A/G intersubtype recombinant human immunodeficiency virus type 1 in Nigeria.

J. Carr, M. Kalish, E. Sanders-Buell, 1999, Virology.

HLA class I diversity among rural rainforest inhabitants in Cameroon: identification of A*2612-B*4407 haplotype.

M. Carrington, D. Burke, U. Tamoufé, 2006, Tissue antigens.

CTL epitope distribution patterns in the Gag and Nef proteins of HIV-1 from subtype A infected subjects in Kenya: Use of multiple peptide sets increases the detectable breadth of the CTL response

D. Birx, F. McCutchan, C. Mason, 2006, BMC Immunology.

Lost in translation: implications of HIV-1 codon usage for immune escape and drug resistance.

D. Birx, F. McCutchan, N. Michael, 2004, AIDS reviews.

Class I HLA-A*7401 is associated with protection from HIV-1 acquisition and disease progression in Mbeya, Tanzania.

Jerome H. Kim, M. Hoelscher, M. Robb, 2010, The Journal of infectious diseases.

Human immunodeficiency virus type 1 neutralizing antibody serotyping using serum pools and an infectivity reduction assay.

J. Mascola, D. Burke, J. Bradac, 1996, AIDS research and human retroviruses.

Immunization with envelope subunit vaccine products elicits neutralizing antibodies against laboratory-adapted but not primary isolates of human immunodeficiency virus type 1. The National Institute of Allergy and Infectious Diseases AIDS Vaccine Evaluation Group.

J. Mascola, D. Burke, M. McElrath, 1996, The Journal of infectious diseases.

Genetic impact of vaccination on breakthrough HIV-1 sequences from the Step trial

Peter B. Gilbert, Ann Duerr, Lawrence Corey, 2011, Nature Medicine.

A cluster of HIV type 1 subtype C sequences from Ethiopia, observed in full genome analysis, is not sustained in subgenomic regions.

M. E. Harris, D. Birx, F. McCutchan, 2003, AIDS research and human retroviruses.

The AG recombinant IbNG and novel strains of group M HIV-1 are common in Cameroon.

D. Gotte, D. Burke, N. Wolfe, 2001, Virology.

Near full-length genome analysis of HIV type 1 CRF02.AG subtype C and CRF02.AG subtype G recombinants.

M. Salminen, F. McCutchan, L. Heyndrickx, 2000, AIDS research and human retroviruses.

Characterization of subtype A HIV-1 from Africa by full genome sequencing.

J. Carr, M. Salminen, E. Sanders-Buell, 1999, AIDS.

Virtually full-length sequences of HIV type 1 subtype J reference strains.

J. Carr, T. Leitner, M. Salminen, 1999, AIDS research and human retroviruses.

Full genome sequences of human immunodeficiency virus type 1 subtypes G and A/G intersubtype recombinants.

D. Gotte, J. Carr, M. Salminen, 1998, Virology.

Full-length sequence of an ethiopian human immunodeficiency virus type 1 (HIV-1) isolate of genetic subtype C.

D. Gotte, D. Burke, M. Salminen, 1996, AIDS research and human retroviruses.

Full-length sequence and mosaic structure of a human immunodeficiency virus type 1 isolate from Thailand

D. Gotte, D. Burke, J. Carr, 1996, Journal of virology.

Genetic diversity of the envelope glycoprotein from human immunodeficiency virus type 1 isolates of African origin

Groen, J. Mascola, D. Burke, 1995, Journal of virology.

HIV type 1 strains from East and West Africa are intermixed in Sudan.

J. Carr, D. Birx, F. McCutchan, 2002, AIDS research and human retroviruses.

Variable contexts and levels of hypermutation in HIV-1 proviral genomes recovered from primary peripheral blood mononuclear cells.

Nelson L Michael, Merlin L Robb, Sodsai Tovanabutra, 2008, Virology.

High proportion of unrelated HIV-1 intersubtype recombinants in the Mbeya region of southwest Tanzania

M. Hoelscher, D. Birx, F. McCutchan, 2001, AIDS.

Comparable Antigenicity and Immunogenicity of Oligomeric Forms of a Novel, Acute HIV-1 Subtype C gp145 Envelope for Use in Preclinical and Clinical Vaccine Research

H. Liao, B. Haynes, S. Zolla-Pazner, 2015, Journal of Virology.

In-Depth, Longitudinal Analysis of Viral Quasispecies from an Individual Triply Infected with Late-Stage Human Immunodeficiency Virus Type 1, Using a Multiple PCR Primer Approach

M. Hoelscher, E. Sanders-Buell, D. Birx, 2005, Journal of Virology.

Multiple introductions of HIV-1 subtype E into the western hemisphere

J. Mascola, D. Burke, J. Carr, 1995, The Lancet.

Identification of CRF34_01B, a second circulating recombinant form unrelated to and more complex than CRF15_01B, among injecting drug users in northern Thailand.

E. Sanders-Buell, M. Robb, D. Birx, 2007, AIDS research and human retroviruses.

HIV type 1 molecular epidemiology among high-risk clients attending the Thai Red Cross Anonymous Clinic in Bangkok, Thailand.

Jerome H. Kim, J. Ananworanich, F. McCutchan, 2010, AIDS research and human retroviruses.

An effective tool for identifying HIV-1 subtypes B, C, CRF01_AE, their recombinant forms, and dual infections in Southeast Asia by the multi-region subtype specific PCR (MSSP) assay.

Jerome H. Kim, E. Sanders-Buell, M. Robb, 2015, Journal of virological methods.

Characterization of complete HIV type 1 genomes from non-B subtype infections in U.S. military personnel.

J. Mascola, E. Sanders-Buell, D. Birx, 2005, AIDS research and human retroviruses.

Genetic, antigenic and serologic characterization of human immunodeficiency virus type 1 from Indonesia.

R. Anthony, J. Mascola, D. Burke, 1997, Journal of acquired immune deficiency syndromes and human retrovirology : official publication of the International Retrovirology Association.

Correlation of genetic and serologic approaches to HIV-1 subtyping in Thailand.

J. Carr, F. McCutchan, M. de Souza, 1996, Journal of acquired immune deficiency syndromes and human retrovirology : official publication of the International Retrovirology Association.

Use of dried blood spots for HIV-1 genotyping in Southeast Asia: Thailand experience.

Jerome H. Kim, F. McCutchan, R. Paris, 2012, The Southeast Asian journal of tropical medicine and public health.

Distinguishing molecular forms of HIV-1 in Asia with a high-throughput, fluorescent genotyping assay, MHAbce v.2.

E. Sanders-Buell, M. Robb, D. Birx, 2007, Virology.

Molecular epidemiology of HIV Type 1 in preparation for a Phase III prime-boost vaccine trial in Thailand and a new approach to HIV Type 1 genotyping.

J. Carr, M. Robb, D. Birx, 2006, AIDS research and human retroviruses.

Heterosexually acquired CRF01_AE/B recombinant HIV type 1 found in Thailand.

J. Carr, D. Birx, F. McCutchan, 2002, AIDS research and human retroviruses.

First CRF01_AE/B recombinant of HIV-1 is found in Thailand.

J. Carr, E. Sanders-Buell, D. Birx, 2001, AIDS.

A nascent HIV type 1 epidemic among injecting drug users in Kabul, Afghanistan is dominated by complex AD recombinant strain, CRF35_AD.

E. Sanders-Buell, F. McCutchan, N. Michael, 2007, AIDS research and human retroviruses.

Distinct circulating recombinant HIV-1 strains among injecting drug users and sex workers in Afghanistan.

E. Sanders-Buell, F. McCutchan, N. Michael, 2010, AIDS research and human retroviruses.

HIV-1 subtypes A and B isolated from the Republic of Korea.

J. Carr, E. Sanders-Buell, F. McCutchan, 1997, AIDS.

Design and evaluation of multi-gene, multi-clade HIV-1 MVA vaccines.

P. Earl, B. Moss, M. Robb, 2009, Vaccine.

Characterization of HIV Isolates Arising After Prolonged Zidovudine Therapy

D. Richman, D. Burke, E. Sanders-Buell, 1992, Journal of acquired immune deficiency syndromes.

HIV-1 genetic diversity.

D. Burke, J. Carr, M. Salminen, 1996, AIDS.

Surveillance for human immunodeficiency virus type 1 group O infections in the United States

F. McCutchan, M. Busch, A. Brown, 1996, Transfusion.

Identification of an env G subtype and heterogeneity of HIV‐1 strains in the Russian Federation and Belarus

J. Mullins, P. Kaleebu, M. Bachmann, 1994, AIDS.

Genetic comparison of HIV-1 isolates from Africa, Europe, and North America.

P. Piot, M. Peeters, F. McCutchan, 1992, AIDS research and human retroviruses.

A novel subtype A/G/J recombinant full-length HIV type 1 genome from Burkina Faso.

F. McCutchan, N. Deacon, T. Laukkanen, 1998, AIDS research and human retroviruses.

Serotyping of primary human immunodeficiency virus type 1 isolates from diverse geographic locations by flow cytometry

J. Mascola, S. Zolla-Pazner, M. Gorny, 1995, Journal of virology.

Development and application of a high-throughput HIV type 1 genotyping assay to identify CRF02_AG in West/West Central Africa.

Donald S Burke, Merlin L Robb, Eric Sanders-Buell, 2004, AIDS research and human retroviruses.

Characterization of full-length HIV type 1 subtype C sequences from South Africa.

J. Carr, F. McCutchan, L. Morris, 2001, AIDS research and human retroviruses.

Exploration of antigenic variation in gp120 from clades A through F of human immunodeficiency virus type 1 by using monoclonal antibodies

J. Moore, D. Ho, J. Mascola, 1994, Journal of virology.

Short communication: HIV type 1 genetic diversity among tea plantation workers in Kericho, Kenya.

M. Robb, D. Birx, F. McCutchan, 2009, AIDS research and human retroviruses.

HIV-1 diversity and prevalence differ between urban and rural areas in the Mbeya region of Tanzania

M. Hoelscher, D. Birx, F. McCutchan, 2005, AIDS.

HIV type 1 subtypes among blood donors in the Mbeya region of southwest Tanzania.

M. Hoelscher, E. Sanders-Buell, D. Birx, 2004, AIDS research and human retroviruses.

Human Immunodeficiency Virus Research Program

R. Redfield, F. McCutchan, L. Temoshok, 1993 .

Characteristics of HIV-infected U.S. Army soldiers linked in molecular transmission clusters, 2001-2012

Peter T. Pham, S. Peel, L. Jagodzinski, 2017, PloS one.

HIV type 1 circulating recombinant form CRF09_cpx from west Africa combines subtypes A, F, G, and may share ancestors with CRF02_AG and Z321.

Sodsai Tovanabutra, D. Birx, F. McCutchan, 2004, AIDS research and human retroviruses.

HIV-1 subtype H near-full length genome reference strains and analysis of subtype-H-containing inter-subtype recombinants

J. Carr, M. Salminen, F. McCutchan, 2000, AIDS.

Full-length genomic sequence of an HIV type 1 subtype G from Kinshasa.

F. McCutchan, K. Van Laethem, A. Vandamme, 1999, AIDS research and human retroviruses.

Genetic analysis of HIV-1 isolates from Zambia and an expanded phylogenetic tree for HIV-1.

D. Burke, F. McCutchan, B. Ungar, 1992, Journal of acquired immune deficiency syndromes.

Identification of a novel clade of human immunodeficiency virus type 1 in Democratic Republic of Congo.

B. Korber, P. Simmonds, J. Carr, 2002, AIDS research and human retroviruses.

OA06-06 LB. Evidence of vaccine-induced changes in breakthrough HIV-1 strains from the Step trial

Allan C. deCamp, Jerome H. Kim, J. Mullins, 2009, Retrovirology.

Genetic relationships determined by a DNA heteroduplex mobility assay: analysis of HIV-1 env genes.

E. G. Shpaer, J. Mullins, E. Delwart, 1993, Science.

Genetic comparison of human immunodeficiency virus (HIV-1) isolates by polymerase chain reaction.

R. Redfield, D. Burke, E. Sanders-Buell, 1991, Journal of acquired immune deficiency syndromes.

Cryptic Multiple HIV-1 Infection Revealed by Early, Frequent, and Deep Sampling during Acute Infection

Phuc T. Pham, Jerome H. Kim, B. Korber, 2014 .

Circulating and unique recombinant forms of HIV type 1 containing subsubtype A2.

W. Dowling, M. Robb, D. Birx, 2006, AIDS research and human retroviruses.

Evolution and probable transmission of intersubtype recombinant human immunodeficiency virus type 1 in a Zambian couple

D. Gotte, F. Gao, P. Sharp, 1997, Journal of Virology.

High-Throughput High-Resolution Class I HLA Genotyping in East Africa

Jerome H. Kim, M. Hoelscher, E. Sanders-Buell, 2010, PloS one.

Genetic variation of HIV type 1 in four World Health Organization-sponsored vaccine evaluation sites: generation of functional envelope (glycoprotein 160) clones representative of sequence subtypes A, B, C, and E. WHO Network for HIV Isolation and Characterization.

P. Sharp, D. Robertson, B. Hahn, 1994, AIDS research and human retroviruses.

Dual infection with human immunodeficiency virus type 1 of distinct envelope subtypes in humans.

J. Mascola, J. Carr, E. Sanders-Buell, 1995, The Journal of infectious diseases.

Distinct circulating recombinant HIV-1 strains among injecting drug users and sex workers in Afghanistan.

E. Sanders-Buell, F. McCutchan, N. Michael, 2010, AIDS research and human retroviruses.

Recent advances in the characterization of HIV-1 neutralization assays for standardized evaluation of the antibody response to infection and vaccination.

S. Zolla-Pazner, D. Dimitrov, D. Montefiori, 2008, Virology.

Elevated Natural Killer Cell Activity Despite Altered Functional and Phenotypic Profile in Ugandans With HIV-1 Clade A or Clade D Infection

M. Robb, F. McCutchan, D. Guwatudde, 2009, Journal of acquired immune deficiency syndromes.

Serotyping International HIV-1 Isolates by V3 Peptides and Whole GP160 Proteins Using BIAcore

J. Mascola, R. Redfield, D. Birx, 1994 .