R. Pelikan

发表

Feature Selection and Dimensionality Reduction in Genomics and Proteomics

Michal Valko, M. Hauskrecht, James Lyons-Weiler, 2007 .

Smad4-Irf6 genetic interaction and TGFβ-mediated IRF6 signaling cascade are crucial for palatal fusion in mice

R. Pelikan, J. Iwata, A. Suzuki, 2013, Development.

Enhancing the analysis of mass-spectrometry proteomic profiles using prior knowledge and past data repositories

M. Hauskrecht, R. Pelikan, 2007 .

Chapter 1 FEATURE SELECTION / WEIGHTING AND DIMENSIONALITY REDUCTION IN GENOMICS AND PROTEOMICS

Michal Valko, M. Hauskrecht, James Lyons-Weiler, 2011 .

Inter-session reproducibility measures for high-throughput data sources

M. Hauskrecht, R. Pelikan, 2008, Summit on translational bioinformatics.

PROTEOMIC ANALYSIS OF URINE IN KIDNEY TRANSPLANT PATIENTS WITH BK VIRUS NEPHROPATHY.

M. Hauskrecht, James Lyons-Weiler, R. Pelikan, 2006, Journal of the American Society of Nephrology : JASN.

Efficient Peak-Labeling Algorithms for Whole-Sample Mass Spectrometry Proteomics

M. Hauskrecht, R. Pelikan, Richard C. Pelikan, 2010, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Feature Selection and Dimensionality Reduction in Genomics and Proteomics

Michal Valko, M. Hauskrecht, James Lyons-Weiler, 2007 .

Feature Selection for Classification of SELDI-TOF-MS Proteomic Profiles

Milos Hauskrecht, William L. Bigbee, James Lyons-Weiler, 2005, Applied bioinformatics.

Identification of Microbial and Proteomic Biomarkers in Early Childhood Caries

Michal Valko, M. Hauskrecht, R. Pelikan, 2011, International journal of dentistry.

TGFβ regulates epithelial-mesenchymal interactions through WNT signaling activity to control muscle development in the soft palate

R. Pelikan, J. Iwata, A. Suzuki, 2014, Development.

Noncanonical Transforming Growth Factor β (TGFβ) Signaling in Cranial Neural Crest Cells Causes Tongue Muscle Developmental Defects*♦

R. Pelikan, J. Iwata, A. Suzuki, 2013, The Journal of Biological Chemistry.

Analytical techniques for the improvement of mass spectrometry protein profiling

Milos Hauskrecht, Richard Pelikan, M. Hauskrecht, 2011 .

Efficient Peak-Labeling Algorithms for Whole-Sample Mass Spectrometry Proteomics

Milos Hauskrecht, Richard Pelikan, M. Hauskrecht, 2010, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Single Cell Transcriptomics Implicate Novel Monocyte and T Cell Immune Dysregulation in Sarcoidosis

A. Levin, C. Lareau, R. Pelikan, 2020, Frontiers in Immunology.

Identification of candidate downstream targets of TGFβ signaling during palate development by genome‐wide transcript profiling

J. Hacia, R. Pelikan, J. Iwata, 2013, Journal of cellular biochemistry.

Chapter 57 – Serum Proteomic Profiling and Analysis

M. Hauskrecht, James Lyons-Weiler, R. Pelikan, 2005 .

Systemic lupus erythematosus variants modulate the function of an enhancer upstream of TNFAIP3

Yao Fu, P. Gaffney, R. Pelikan, 2022, Frontiers in Genetics.

Role of Systemic Lupus Erythematosus Risk Variants With Opposing Functional Effects as a Driver of Hypomorphic Expression of TNIP1 and Other Genes Within a Three‐Dimensional Chromatin Network

P. Gaffney, R. Pelikan, J. Kelly, 2019, Arthritis & rheumatology.

Mutated KLF4(K409Q) in meningioma binds STRs and activates FGF3 gene expression

R. Pelikan, I. Dunn, B. Mooers, 2022, iScience.

Modulation of lipid metabolic defects rescues cleft palate in Tgfbr2 mutant mice.

R. Pelikan, J. Iwata, A. Suzuki, 2014, Human molecular genetics.

Disruption of the ERK/MAPK pathway in neural crest cells as a potential cause of Pierre Robin sequence

R. Pelikan, P. Sanchez-Lara, Y. Chai, 2015, Development.

ALK5-Mediated Transforming Growth Factor β Signaling in Neural Crest Cells Controls Craniofacial Muscle Development via Tissue-Tissue Interactions

R. Pelikan, Y. Chai, A. Han, 2014, Molecular and Cellular Biology.

ALK 5-mediated TGF-β signaling in neural crest cells controls craniofacial muscle 1 development via tissue-tissue interactions

R. Pelikan, Y. Chai, A. Han, 2014 .

Intersession reproducibility of mass spectrometry profiles and its effect on accuracy of multivariate classification models

Milos Hauskrecht, William L. Bigbee, James Lyons-Weiler, 2007, Bioinform..

Novel ovarian cancer maintenance therapy targeted at mortalin and mutant p53

R. Pelikan, S. Lightfoot, D. Benbrook, 2019, International journal of cancer.

Variants on the UBE2L3/YDJC Autoimmune Disease Risk Haplotype Increase UBE2L3 Expression by Modulating CCCTC‐Binding Factor and YY1 Binding

P. Gaffney, R. Pelikan, J. Kelly, 2021, Arthritis & rheumatology.

Enhancer histone-QTLs are enriched on autoimmune risk haplotypes and influence gene expression within chromatin networks

Martin J. Aryee, P. Gaffney, C. Lareau, 2018, Nature Communications.

Fibroblast Growth Factor 9 (FGF9)-Pituitary Homeobox 2 (PITX2) Pathway Mediates Transforming Growth Factor β (TGFβ) Signaling to Regulate Cell Proliferation in Palatal Mesenchyme during Mouse Palatogenesis*

J. Hacia, R. Pelikan, J. Iwata, 2011, The Journal of Biological Chemistry.

WNT/β-Catenin Signaling Regulates Multiple Steps of Myogenesis by Regulating Step-Specific Targets

R. Pelikan, J. Iwata, A. Suzuki, 2015, Molecular and Cellular Biology.

Single-cell analysis of glandular T cell receptors in Sjögren's syndrome.

D. Chudakov, R. Pelikan, C. Montgomery, 2016, JCI insight.

ORIGINAL RESEARCH Assessing the Statistical Significance of the Achieved Classification Error of Classifiers Constructed using Serum Peptide Profiles, and a Prescription for Random Sampling Repeated Studies for Massive

Milos Hauskrecht, James Lyons-Weiler, Richard Pelikan, 2022 .