D. Bourgeois

发表

The nature of transient dark states in a photoactivatable fluorescent protein.

M. Field, Arijit Roy, V. Adam, 2011, Journal of the American Chemical Society.

Structural characterization of IrisFP, an optical highlighter undergoing multiple photo-induced transformations

M. Field, V. Adam, D. Bourgeois, 2008, Proceedings of the National Academy of Sciences.

Data storage based on photochromic and photoconvertible fluorescent proteins.

A. Miyawaki, Y. Yamagata, V. Adam, 2010, Journal of biotechnology.

Intrinsic dynamics in ECFP and Cerulean control fluorescence quantum yield.

Antoine Royant, Dominique Bourgeois, Martin J Field, 2009, Biochemistry.

Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography.

J. Paul Robinson, S. Boutet, M. Field, 2018, Nature chemistry.

Advances in kinetic protein crystallography.

Antoine Royant, Dominique Bourgeois, D. Bourgeois, 2005, Current opinion in structural biology.

Kinetic protein crystallography: a tool to watch proteins in action

D. Bourgeois, M. Weik, Jean-Pierre Ebel, 2009 .

Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy

M. Field, R. Shoeman, L. Foucar, 2020, Nature Communications.

Supramolecular assembly of the E. coli LdcI upon acid stress

V. Adam, D. Bourgeois, J. Kleman, 2020, bioRxiv.

Arginine 66 Controls Dark-State Formation in Green-to-Red Photoconvertible Fluorescent Proteins.

V. Adam, D. Bourgeois, Romain Berardozzi, 2016, Journal of the American Chemical Society.

Rational control of structural off-state heterogeneity in a photoswitchable fluorescent protein provides switching contrast enhancement

S. Boutet, R. Shoeman, L. Foucar, 2021 .

Characterization of Photocycle Intermediates in Crystalline Photoactive Yellow Protein † ¶

K. Hellingwerf, W. Crielaard, D. Bourgeois, 2003 .

Characterization of Photocycle Intermediates in Crystalline Photoactive Yellow Protein†,¶

K. Hellingwerf, W. Crielaard, D. Bourgeois, 2003, Photochemistry and photobiology.

Complex landscape of protein structural dynamics unveiled by nanosecond Laue crystallography

A. Miele, G. Sciara, M. Brunori, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Time-resolved methods in biophysics. 6. Time-resolved Laue crystallography as a tool to investigate photo-activated protein dynamics

M. Brunori, B. Vallone, D. Bourgeois, 2007, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

Dipar Institu Synch Structural Dynamics of Myoglobin

M. Brunori, B. Vallone, D. Bourgeois, 2010 .

Structural dynamics of myoglobin.

M. Brunori, B. Vallone, D. Bourgeois, 2008, Methods in enzymology.

Extended subnanosecond structural dynamics of myoglobin revealed by Laue crystallography.

G. Sciara, M. Brunori, B. Vallone, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Cell morphology and nucleoid dynamics in dividing Deinococcus radiodurans

D. Bourgeois, J. Kleman, Y. Wong, 2019, Nature Communications.

Cryophotolysis of a caged oxygen compound for use in low temperature biological studies

V. Adam, D. Bourgeois, A. Cowley, 2009, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

Nanoscale dynamics of peptidoglycan assembly during the cell cycle of Streptococcus pneumoniae

D. Bourgeois, Y. Wong, A. D. Di Guilmi, 2020, Current Biology.

Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM

V. Adam, D. Bourgeois, P. Dedecker, 2019, Nature Methods.

Single-pulse Laue diffraction, stroboscopic data collection and femtosecond flash photolysis on macromolecules

K. Moffat, G. Mourou, D. Bourgeois, 1997 .

Advances in spectroscopic methods for biological crystals. 1. Fluorescence lifetime measurements

V. Adam, D. Bourgeois, J. McGeehan, 2007 .

Photophysical studies at cryogenic temperature reveal a novel photoswitching mechanism of rsEGFP2

V. Adam, D. Bourgeois, J. Enderlein, 2022, bioRxiv.

mEos4b Photoconversion Efficiency Depends on Laser Illumination Conditions Used in PALM.

D. Bourgeois, O. Glushonkov, Daniel Thédié, 2022, The journal of physical chemistry letters.

Rational design of enhanced photoresistance in a photoswitchable fluorescent protein

V. Adam, D. Bourgeois, M. Byrdin, 2015, Methods and applications in fluorescence.

Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction.

D Bourgeois, V Srajer, K. Moffat, 2001, Biochemistry.

A molecular movie at 1.8 A resolution displays the photocycle of photoactive yellow protein, a eubacterial blue-light receptor, from nanoseconds to seconds.

D Bourgeois, V Srajer, K. Moffat, 2001, Biochemistry.

Time-resolved structures of macromolecules at the ESRF: Single-pulse Laue diffraction, stroboscopic data collection and femtosecond flash photolysis

Gerard Mourou, Michael Wulff, G. Naylor, 1997 .

Photolysis of the Carbon Monoxide Complex of Myoglobin: Nanosecond Time-Resolved Crystallography

D Bourgeois, V Srajer, K. Moffat, 1996, Science.

Energy transduction on the nanosecond time scale: early structural events in a xanthopsin photocycle.

D Bourgeois, V Srajer, K. Hellingwerf, 1998, Science.

Temperature derivative fluorescence spectroscopy as a tool to study dynamical changes in protein crystals.

D. Bourgeois, A. Royant, M. Weik, 2004, Biophysical journal.

A microspectrophotometer for UV–visible absorption and fluorescence studies of protein crystals

V. Adam, D. Bourgeois, X. Vernède, 2002 .

The crystal structure of Mycobacterium tuberculosis thymidylate kinase in complex with 3'-azidodeoxythymidine monophosphate suggests a mechanism for competitive inhibition.

H. Munier-Lehmann, V. Adam, D. Bourgeois, 2005, Biochemistry.

X-ray radiation-induced damage in DNA monitored by online Raman.

D. Bourgeois, R. Ravelli, J. McGeehan, 2007, Journal of synchrotron radiation.

Feasibility and Realization of Single-Pulse Laue Diffraction on Macromolecular Crystals at ESRF.

K. Moffat, D. Bourgeois, M. Wulff, 1996, Journal of synchrotron radiation.

Raman-assisted X-ray crystallography for the analysis of biomolecules.

G. Katona, D. Bourgeois, P. Carpentier, 2009, Methods in molecular biology.

Raman-assisted crystallography suggests a mechanism of X-ray-induced disulfide radical formation and reparation.

D. Bourgeois, A. Royant, M. Weik, 2010, Structure.

The 1.6A X-ray structure of the unusual c-type cytochrome, cytochrome cL, from the methylotrophic bacterium Methylobacterium extorquens.

J. Cooper, C. Anthony, D. Bourgeois, 2006, Journal of molecular biology.

Single molecule imaging simulations with advanced fluorophore photophysics

D. Bourgeois, 2022, bioRxiv.

Deciphering Structural Photophysics of Fluorescent Proteins by Kinetic Crystallography

D. Bourgeois, 2017, International journal of molecular sciences.

In cellulo Evaluation of Phototransformation Quantum Yields in Fluorescent Proteins Used As Markers for Single-Molecule Localization Microscopy

S. Hess, V. Adam, D. Bourgeois, 2014, PloS one.

Structural basis of X-ray-induced transient photobleaching in a photoactivatable green fluorescent protein.

V. Adam, D. Bourgeois, G. Nienhaus, 2009, Journal of the American Chemical Society.

Laue crystallography: coming of age

B. Stoddard, Z. Ren, K. Moffat, 1999 .

Serial Femtosecond Crystallography and Ultrafast Absorption Spectroscopy of the Photoswitchable Fluorescent Protein IrisFP.

I. Schlichting, Y. Joti, K. Tono, 2016, The journal of physical chemistry letters.

New processing tools for weak and/or spatially overlapped macromolecular diffraction patterns.

D Bourgeois, D. Bourgeois, Dominique Bourgeois, 1999, Acta crystallographica. Section D, Biological crystallography.

Supramolecular assembly of the Escherichia coli LdcI upon acid stress

V. Adam, D. Bourgeois, J. Kleman, 2020, Proceedings of the National Academy of Sciences.

Cell morphology and nucleoid dynamics in dividing D. radiodurans

D. Bourgeois, J. Kleman, Y. Wong, 2019, bioRxiv.

Nanoscale imaging of CD47 informs how plasma membrane modifications shape apoptotic cell recognition

D. Bourgeois, N. Thielens, P. Tacnet-Delorme, 2023, Communications Biology.

Use of a 'caged' analogue to study the traffic of choline within acetylcholinesterase by kinetic crystallography.

J. Sussman, D. Bourgeois, I. Silman, 2007, Acta crystallographica. Section D, Biological crystallography.

N-terminal arm exchange is observed in the 2.15 A crystal structure of oxidized nitrite reductase from Pseudomonas aeruginosa.

V. Fülöp, J. Hajdu, M. Brunori, 1997, Structure.

A General Mechanism of Photoconversion of Green-to-Red Fluorescent Proteins Based on Blue and Infrared Light Reduces Phototoxicity in Live-Cell Single-Molecule Imaging.

Alexander Balinovic, U. Endesfelder, D. Bourgeois, 2017, Angewandte Chemie.

Reverse pH-dependence of chromophore protonation explains the large Stokes shift of the red fluorescent protein mKeima.

D. Bourgeois, L. Blanchoin, P. Carpentier, 2009, Journal of the American Chemical Society.

The crystal structure of a llama heavy chain variable domain

Dominique Bourgeois, Christian Cambillau, D. Bourgeois, 1996, Nature Structural Biology.

A pancreatic lipase with a phospholipase A1 activity: crystal structure of a chimeric pancreatic lipase-related protein 2 from guinea pig.

D. Bourgeois, R. Verger, C. Cambillau, 1996, Structure.

Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM

V. Adam, D. Bourgeois, P. Dedecker, 2018, bioRxiv.

Photoswitching of Green mEos2 by Intense 561 nm Light Perturbs Efficient Green-to-Red Photoconversion in Localization Microscopy.

V. Adam, D. Bourgeois, Romain Berardozzi, 2017, The journal of physical chemistry letters.

Reversible photoswitching in fluorescent proteins: A mechanistic view

V. Adam, D. Bourgeois, 2012, IUBMB life.

Improved Estimation of Structure-Factor Difference Amplitudesfrom Poorly Accurate Data

D. Bourgeois, T. Ursby, T. Ursby, 1997 .

Remodeling of the Z-Ring Nanostructure during the Streptococcus pneumoniae Cell Cycle Revealed by Photoactivated Localization Microscopy

T. Vernet, V. Adam, D. Bourgeois, 2015, mBio.

Structural basis of enhanced photoconversion yield in green fluorescent protein-like protein Dendra2.

V. Adam, D. Bourgeois, G. Nienhaus, 2009, Biochemistry.

Shoot-and-Trap: Use of specific x-ray damage to study structural protein dynamics by temperature-controlled cryo-crystallography

J. Sussman, D. Bourgeois, I. Silman, 2008, Proceedings of the National Academy of Sciences.

Kinetic Protein Crystallography using Caged Compounds

D. Bourgeois, M. Weik, 2008 .

Cryophotolysis of caged compounds: a technique for trapping intermediate states in protein crystals.

M. Delarue, D. Bourgeois, M. Weik, 2002, Acta crystallographica. Section D, Biological crystallography.

Static Laue diffraction studies on acetylcholinesterase.

J L Sussman, D Bourgeois, I Silman, 1998, Acta crystallographica. Section D, Biological crystallography.

An Integration Routine Based on Profile Fitting with Optimized Fitting Area for the Evaluation of Weak and/or Overlapped Two-Dimensional Laue or Monochromatic Patterns

Didier Nurizzo, Dominique Bourgeois, Christian Cambillau, 1998 .

Bacterial cell wall nanoimaging by autoblinking microscopy

J. Sibarita, D. Bourgeois, F. Lacroix, 2018, Scientific Reports.

Structural basis for the mechanism of Ca(2+) activation of the di-heme cytochrome c peroxidase from Pseudomonas nautica 617.

Dominique Bourgeois, Isabel Moura, D. Bourgeois, 2004, Structure.

A Long-Lived Triplet State Is the Entrance Gateway to Oxidative Photochemistry in Green Fluorescent Proteins.

D. Bourgeois, M. Byrdin, Chenxi Duan, 2018, Journal of the American Chemical Society.

Extra kinetic dimensions for label discrimination

D. Bourgeois, Marie‐Aude Plamont, N. Desprat, 2022, Nature Communications.

Mycobacterium tuberculosis thymidylate kinase: structural studies of intermediates along the reaction pathway.

M. Delarue, H. Munier-Lehmann, D. Bourgeois, 2003, Journal of molecular biology.

Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray-induced photo-reduction.

V. Adam, D. Bourgeois, A. Royant, 2004, Structure.

Structure of superoxide reductase bound to ferrocyanide and active site expansion upon X-ray induced photo-reduction

V. Adam, D. Bourgeois, A. Royant, 2004 .

Simultaneous measurements of solvent dynamics and functional kinetics in a light-activated enzyme.

D. Bourgeois, A. Royant, M. Weik, 2009, Biophysical journal.

Cryophotolysis of ortho‐Nitrobenzyl Derivatives of Enzyme Ligands for the Potential Kinetic Crystallography of Macromolecules

D. Bourgeois, M. Weik, J. Kroon, 2001, Chembiochem : a European journal of chemical biology.

Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (dT) (2.1 A Resolution)

H. Munier-Lehmann, V. Adam, D. Bourgeois, 2005 .

From EosFP to mIrisFP: structure‐based development of advanced photoactivatable marker proteins of the GFP‐family

V. Adam, D. Bourgeois, J. Wiedenmann, 2011, Journal of biophotonics.

mEos4b photoconversion efficiency depends on laser illumination conditions used in PALM

D. Bourgeois, O. Glushonkov, Daniel Thédié, 2022, bioRxiv.

Photoactivated structural dynamics of fluorescent proteins.

Dominique Bourgeois, V. Adam, D. Bourgeois, 2012, Biochemical Society transactions.

Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy

M. Field, R. Shoeman, L. Foucar, 2020, Nature Communications.

Mechanistic investigations of green mEos4b reveal a dynamic long-lived dark state.

V. Adam, D. Bourgeois, P. Dedecker, 2020, Journal of the American Chemical Society.

The point-spread function of X-ray image-intensifiers/CCD-camera and imaging-plate systems in crystallography: assessment and consequences for the dynamic range

D. Bourgeois, S. O. Svensson, A. Kvick, 1994 .

Extraction of accurate structure-factor amplitudes from Laue data: wavelength normalization with wiggler and undulator X-ray sources.

K. Moffat, J. Key, M. Schmidt, 2000, Journal of synchrotron radiation.

Raman-assisted crystallography of biomolecules at the synchrotron: instrumentation, methods and applications.

D. Bourgeois, J. McGeehan, A. Royant, 2011, Biochimica et biophysica acta.

Advances in spectroscopic methods for biological crystals. 2. Raman spectroscopy

D. Bourgeois, A. Royant, J. Ohana, 2007 .

Low-temperature switching by photoinduced protonation in photochromic fluorescent proteins

V. Adam, D. Bourgeois, P. Carpentier, 2010, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

Structural basis of photoswitching in fluorescent proteins.

V. Adam, D. Bourgeois, M. Byrdin, 2014, Methods in molecular biology.

Raman-Assisted Crystallography Reveals End-On Peroxide Intermediates in a Nonheme Iron Enzyme

Nikolay Tsanov, Patricia Amara, Philippe Carpentier, 2007, Science.

Structural evidence for a two-regime photobleaching mechanism in a reversibly switchable fluorescent protein.

Jacqueline Ridard, Chenxi Duan, Dominique Bourgeois, 2013, Journal of the American Chemical Society.

Does the Reduction of c Heme Trigger the Conformational Change of Crystalline Nitrite Reductase?*

M. Brunori, D. Bourgeois, D. Nurizzo, 1999, The Journal of Biological Chemistry.

Conformational changes occurring upon reduction and NO binding in nitrite reductase from Pseudomonas aeruginosa.

D Nurizzo, D Bourgeois, M Brunori, 1998, Biochemistry.

The structural dynamics of myoglobin.

D Bourgeois, M Brunori, M. Brunori, 2004, Journal of structural biology.

Watching CO enmeshed in hemoglobin.

D. Bourgeois, 2009, Structure.

Ligand pathways in neuroglobin revealed by low-temperature photodissociation and docking experiments

M. Brunori, B. Vallone, T. Prangé, 2019, IUCrJ.

Phototransformable fluorescent proteins: Future challenges.

Dominique Bourgeois, V. Adam, D. Bourgeois, 2014, Current opinion in chemical biology.

Raman Assisted Crystallography Reveals a Mechanism of X-Ray Induced Reversible Disulfide Radical Formation

D. Bourgeois, A. Royant, M. Weik, 2010 .

Towards automated Laue data processing: application to the choice of optimal X-ray spectrum.

D Bourgeois, U Wagner, M Wulff, 2000, Acta crystallographica. Section D, Biological crystallography.

Diffusion pathways of oxygen species in the phototoxic fluorescent protein Killer Red

M. Field, Arijit Roy, D. Bourgeois, 2010, Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology.

Structural basis for the phototoxicity of the fluorescent protein KillerRed

D. Bourgeois, L. Blanchoin, P. Carpentier, 2009, FEBS letters.

NMR reveals light-induced changes in the dynamics of a photoswitchable fluorescent protein

I. Ayala, V. Adam, D. Bourgeois, 2019, bioRxiv.

Low-temperature chromophore isomerization reveals the photoswitching mechanism of the fluorescent protein Padron.

D. Bourgeois, I. Demachy, P. Carpentier, 2011, Journal of the American Chemical Society.

Rational design of ultrastable and reversibly photoswitchable fluorescent proteins for super-resolution imaging of the bacterial periplasm

V. Adam, D. Bourgeois, J. Colletier, 2016, Scientific Reports.

Photoconversion of the fluorescent protein EosFP: a hybrid potential simulation study reveals intersystem crossings.

M. Field, V. Adam, D. Bourgeois, 2009, Journal of the American Chemical Society.

Bacterial cell wall nanoimaging by autoblinking microscopy

J. Sibarita, D. Bourgeois, F. Lacroix, 2018, Scientific Reports.

Disentangling Chromophore States in a Reversibly Switchable Green Fluorescent Protein: Mechanistic Insights from NMR Spectroscopy.

I. Ayala, V. Adam, D. Bourgeois, 2021, Journal of the American Chemical Society.

Time-resolved studies of carbonmonoxy myoglobin photolysis: protein relaxation and ligand trajectory

K. Moffat, D. Bourgeois, W. Royer, 1998, Technical Digest. Summaries of Papers Presented at the International Quantum Electronics Conference. Conference Edition. 1998 Technical Digest Series, Vol.7 (IEEE Cat. No.98CH36236).

Accuracy of structural information obtained at the European Synchrotron Radiation Facility from very rapid Laue data collection on macromolecules

D. Bourgeois, C. Cambillau, M. Wulff, 1997 .

UV laser-excited fluorescence as a tool for the visualization of protein crystals mounted in loops.

Didier Nurizzo, Florent Cipriani, Bernard Lavault, 2006, Acta crystallographica. Section D, Biological crystallography.

Analytical Time‐Resolved Studies Using Photochemical Triggering Methods

D. Bourgeois, M. Weik, V. Jayaraman, 2005 .

Photoactivated structural dynamics of fluorescent proteins.

V. Adam, D. Bourgeois, Aline Regis-Faro, 2012, Biochemical Society transactions.

Light-Induced Forward and Reverse Intersystem Crossing in Green Fluorescent Proteins at Cryogenic Temperatures.

D. Bourgeois, M. Byrdin, O. Glushonkov, 2023, The journal of physical chemistry. B.

Data storage based on photochromic and photoconvertible fluorescent proteins.

A. Miyawaki, Y. Yamagata, V. Adam, 2010, Journal of biotechnology.