Ken Chu

发表

A framework for human microbiome research

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Structure, Function and Diversity of the Healthy Human Microbiome

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Improving Microbial Genome Annotations in an Integrated Database Context

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2013, PloS one.

Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016, BMC Genomics.

IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites

Victor M. Markowitz, Ken Chu, Krishna Palaniappan, 2015, mBio.

The integrated microbial genomes system: an expanding comparative analysis resource

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2009, Nucleic Acids Res..

IMG-ABC: An Atlas of Biosynthetic Gene Clusters to Fuel the Discovery of Novel Secondary Metabolites

Natalia N. Ivanova, M. Fischbach, N. Kyrpides, 2014 .

Lawrence Berkeley National Laboratory Recent Work Title Supporting community annotation and user collaboration in the integrated microbial genomes ( IMG ) system Permalink

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016 .

IMG/M: the integrated metagenome data management and comparative analysis system

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2011, Nucleic Acids Res..

IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata

Natalia N. Ivanova, N. Kyrpides, I. Chen, 2022, Nucleic Acids Res..

IMG 4 version of the integrated microbial genomes comparative analysis system

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2013, Nucleic Acids Res..

IMG ER: a system for microbial genome annotation expert review and curation

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2009, Bioinform..

IMG: the integrated microbial genomes database and comparative analysis system

Peter Williams, I-Min A. Chen, Natalia Ivanova, 2011, Nucleic Acids Res..

IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2016, Nucleic Acids Res..

IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes

I-Min A. Chen, Ken Chu, Krishna Palaniappan, 2018, Nucleic Acids Res..

IMG/M: integrated genome and metagenome comparative data analysis system

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2016, Nucleic Acids Res..

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

I-Min A. Chen, Inna Dubchak, Natalia Ivanova, 2007, Nucleic Acids Res..

IMG/VR v3: an integrated ecological and evolutionary framework for interrogating genomes of uncultivated viruses

I-Min A. Chen, Frederik Schulz, Russell Y. Neches, 2020, Nucleic Acids Res..

The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities

I-Min A. Chen, Ken Chu, Anna Ratner, 2020, Nucleic Acids Res..

IMG/M 4 version of the integrated metagenome comparative analysis system

I-Min A. Chen, Natalia Ivanova, Victor M. Markowitz, 2013, Nucleic Acids Res..

IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes

I-Min A. Chen, Mercè Llabrés, Ken Chu, 2018, Nucleic Acids Res..

IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses

I-Min A. Chen, Georgios A. Pavlopoulos, Feng Chen, 2016, Nucleic Acids Res..

IMG/M: a data management and analysis system for metagenomes

I-Min A. Chen, Inna Dubchak, Natalia Ivanova, 2007, Nucleic Acids Res..

The IMG/M data management and analysis system v.7: content updates and new features

Natalia N. Ivanova, A. Visel, N. Kyrpides, 2022, Nucleic Acids Res..

IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase

I-Min A. Chen, Ken Chu, Anna Ratner, 2019, Nucleic Acids Res..

IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

I-Min A. Chen, Victor M. Markowitz, Ken Chu, 2012, PloS one.

Ten years of maintaining and expanding a microbial genome and metagenome analysis system.

Ken Chu, Amrita Pati, Natalia N. Ivanova, 2015, Trends in microbiology.

Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System

Sean D. Hooper, Victor M. Markowitz, Ken Chu, 2009, PloS one.

A data analysis and coordination center for the human microbiome project

Victor Markowitz, Jonathan Crabtree, Rob Knight, 2010, Genome Biology.

Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system

Natalia N. Ivanova, N. Kyrpides, V. Markowitz, 2016, BMC Genomics.

Maintaining a microbial genome & metagenome data analysis system in an academic setting

I-Min A. Chen, Victor M. Markowitz, Ken Chu, 2014, SSDBM '14.