N. Sheth

发表

A framework for human microbiome research

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Production of complex nucleic acid libraries using highly parallel in situ oligonucleotide synthesis

Patrick J. Paddison, P. Linsley, J. Burchard, 2004, Nature Methods.

Structure, Function and Diversity of the Healthy Human Microbiome

Katherine H. Huang, Daniel D. Sommer, Zhengyuan O. Wang, 2012, Nature.

Optimizing Read Mapping to Reference Genomes to Determine Composition and Species Prevalence in Microbial Communities

Zhengyuan O. Wang, G. Weinstock, E. Sodergren, 2012, PloS one.

Comprehensive splice-site analysis using comparative genomics

R. Sachidanandam, A. Krainer, M. L. Hastings, 2006, Nucleic acids research.

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies

Jennifer M. Fettweis, David J. Edwards, G. Buck, 2015, BMC Microbiology.

Second-generation shRNA libraries covering the mouse and human genomes

Patrick J. Paddison, R. Sachidanandam, S. Elledge, 2005, Nature Genetics.

The vaginal microbiome and preterm birth

Jonas Korlach, Stephen S Fong, Ekaterina Smirnova, 2019, Nature Medicine.

Rnai codex - a comprehensive RNAi resource

Nihar U. Sheth, Andrew Olson, Andrew J. Olson, 2005 .

Ethanol-Induced Behavioral Sensitization Alters the Synaptic Transcriptome and Exon Utilization in DBA/2J Mice

Robert W. Williams, Steven P. Bradley, N. Sheth, 2018, Front. Genet..

Stem Cell Transplantation as a Dynamical System: Are Clinical Outcomes Deterministic?

M. Neale, G. Buck, N. Sheth, 2014, Front. Immunol..

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

Hardik I. Parikh, Steven P. Bradley, Jennifer M. Fettweis, 2019, Nature Medicine.

In silico Derivation of HLA-Specific Alloreactivity Potential from Whole Exome Sequencing of Stem-Cell Transplant Donors and Recipients: Understanding the Quantitative Immunobiology of Allogeneic Transplantation

M. Neale, G. Buck, N. Sheth, 2014, Front. Immunol..

Differences in vaginal microbiome in African American women versus women of European ancestry.

Jennifer M. Fettweis, David J. Edwards, G. Buck, 2014, Microbiology.

Putative cis-Regulatory Elements Associated with Heat Shock Genes Activated During Excystation of Cryptosporidium parvum

G. Buck, N. Sheth, P. Manque, 2010, PloS one.

Cloning of short hairpin RNAs for gene knockdown in mammalian cells

Patrick J. Paddison, R. Sachidanandam, M. Cleary, 2004, Nature Methods.

Argos, a replicable genome information system for FlyBase, euGenes and other databases.

Nihar Sheth, Joshua Goodman, Don Gilbert, 2004 .

NPGRJ_NMETH_724 241..248

P. Linsley, J. Burchard, M. Cleary, 2018 .

Rare mutations and potentially damaging missense variants in genes encoding fibrillar collagens and proteins involved in their production are candidates for risk for preterm premature rupture of membranes

Hardik I. Parikh, N. Sheth, R. Romero, 2017, PloS one.

Species-level classification of the vaginal microbiome

Jennifer M. Fettweis, Gregory A Buck, G. Buck, 2012, BMC Genomics.

Multi-omic Microbiome Profiles in the Female Reproductive Tract in Early Pregnancy

Hardik I. Parikh, Jennifer M. Fettweis, David J. Edwards, 2019 .

The vaginal microbiome and preterm birth

Hardik I. Parikh, Steven P. Bradley, David J. Edwards, 2019, Nature Medicine.

Racioethnic diversity in the dynamics of the vaginal microbiome during pregnancy

Hardik I. Parikh, Steven P. Bradley, David J. Edwards, 2019, Nature Medicine.

Comparison of Lactobacillus crispatus isolates from Lactobacillus-dominated vaginal microbiomes with isolates from microbiomes containing bacterial vaginosis-associated bacteria.

G. Buck, N. Sheth, J. Strauss, 2016, Microbiology.

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential in HLA-Matched and -Mismatched Donor-Recipient Pairs.

M. Neale, G. Buck, N. Sheth, 2015, Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation.

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides Demonstrates Different Alloreactivity Potential In HLA-Matched and Mismatched Donor-Recipient Pairs

G. Buck, N. Sheth, M. Manjili, 2015, bioRxiv.

MeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing

Hardik I. Parikh, Steven P. Bradley, G. Buck, 2015, BMC Bioinformatics.

Dynamical system modeling to simulate donor T cell response to whole exome sequencing-derived recipient peptides: Understanding randomness in alloreactivity incidence following stem cell transplantation

M. Neale, G. Buck, N. Sheth, 2016, PloS one.

Dynamical System Modeling to Simulate Donor T Cell Response to Whole Exome Sequencing-Derived Recipient Peptides: Understanding Randomness In Clinical Outcomes Following Stem Cell Transplantation

N. Sheth, R. Sabo, M. Serrano, 2016, bioRxiv.

An Emerging Mycoplasma Associated with Trichomoniasis, Vaginal Infection and Disease

Jennifer M. Fettweis, G. Buck, N. Sheth, 2014, PloS one.

Whole exome sequencing to estimate alloreactivity potential between donors and recipients in stem cell transplantation

M. Neale, G. Buck, N. Sheth, 2014, British journal of haematology.

Skin-to-Skin Care and the Development of the Preterm Infant Oral Microbiome

Hardik I. Parikh, G. Buck, N. Sheth, 2015, American Journal of Perinatology.

BOTUX: Bayesian-like operational taxonomic unit examiner

Gregory A. Buck, Nihar U. Sheth, Ricky S. Adkins, 2014, Int. J. Comput. Biol. Drug Des..

MeFiT: merging and filtering tool for illumina paired-end reads for 16S rRNA amplicon sequencing

Gregory A. Buck, Nihar U. Sheth, Vishal N. Koparde, 2015, BMC Bioinformatics.

Effects of combined oral contraceptives, depot medroxyprogesterone acetate and the levonorgestrel-releasing intrauterine system on the vaginal microbiome.

Jennifer M. Fettweis, David J. Edwards, N. Sheth, 2017, Contraception.

An optimization‐based web application for synthesis and analysis of biomass‐to‐fuel strategies

Nihar Sheth, Rex T.L. Ng, Christos T. Maravelias, 2018 .

Association between statin use, the vaginal microbiome, and Gardnerella vaginalis vaginolysin-mediated cytotoxicity

Steven P. Bradley, G. Buck, N. Sheth, 2017, PloS one.

The Vaginal Microbiome: Disease, Genetics and the Environment

Jennifer M. Fettweis, Seth B. Roberts, M. Neale, 2010, Nature Precedings.

RNAi Codex: a portal/database for short-hairpin RNA (shRNA) gene-silencing constructs

J. S. Lee, G. J. Hannon, Andrew J. Olson, 2005, Nucleic Acids Res..

Skin-to-Skin Care and the Development of the Preterm Infant Oral Microbiome

Hardik I. Parikh, Jennifer M. Fettweis, G. Buck, 2015, American Journal of Perinatology.