C. Acharya

发表

Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer.

H. Dressman, J. Nevins, Sayan Mukherjee, 2008, JAMA.

Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial.

J. Nevins, Sayan Mukherjee, J. Bergh, 2007, The Lancet. Oncology.

Age- and sex-specific genomic profiles in non-small cell lung cancer.

J. Nevins, A. Potti, C. Acharya, 2010, JAMA.

Pharmacogenomic strategies provide a rational approach to the treatment of cisplatin-resistant patients with advanced cancer.

H. Dressman, J. Nevins, P. Febbo, 2007, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

An integration of complementary strategies for gene-expression analysis to reveal novel therapeutic opportunities for breast cancer

Adam M. Gustafson, J. Nevins, C. Perou, 2009, Breast Cancer Research.

Characterizing the Clinical Relevance of an Embryonic Stem Cell Phenotype in Lung Adenocarcinoma

A. Potti, C. Acharya, K. Walters, 2009, Clinical Cancer Research.

Retraction: Acharya CR, et al. Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer. JAMA. 2008;299(13):1574-1587.

H. Dressman, J. Nevins, Sayan Mukherjee, 2012, JAMA.

Retraction--Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial.

J. Nevins, Sayan Mukherjee, J. Bergh, 2011, The Lancet. Oncology.

Young age at diagnosis correlates with worse prognosis and defines a subset of breast cancers with shared patterns of gene expression.

J. Marks, J. Nevins, P. Febbo, 2008, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

Age-Specific Differences in Oncogenic Pathway Deregulation Seen in Human Breast Tumors

J. Marks, J. Nevins, Sayan Mukherjee, 2008, PloS one.

Efficient Analysis of Complex, Multi-modal Genomic Data

C. Acharya, 2016 .

Mapping eQTL by leveraging multiple tissues and DNA methylation

A. Allen, K. Owzar, C. Acharya, 2016, bioRxiv.

Retraction and Corrections

T. Ried, C. Acharya, D. Hsu, 2009 .

Do donor oocyte cycles comply with ASRM/SART embryo transfer guidelines? An analysis of 13,393 donor cycles from the SART registry.

C. Acharya, J. Goldfarb, S. Muasher, 2016, Fertility and sterility.

Exploiting expression patterns across multiple gene isoforms to identify radiation response biomarkers in early-stage breast cancer patients

A. Allen, K. Owzar, C. Acharya, 2016, bioRxiv.

Sensitizing immune unresponsive colorectal cancers to immune checkpoint inhibitors through MAVS overexpression

P. Agarwal, C. Acharya, H. Lyerly, 2022, Journal for ImmunoTherapy of Cancer.

Sperm DNA methylation altered by THC and nicotine: Vulnerability of neurodevelopmental genes with bivalent chromatin

E. Levin, S. Murphy, C. Acharya, 2020, Scientific Reports.

Pregnancy outcomes decline with increasing recipient body mass index: an analysis of 22,317 fresh donor/recipient cycles from the 2008-2010 Society for Assisted Reproductive Technology Clinic Outcome Reporting System registry.

C. Acharya, J. Goldfarb, S. Muasher, 2016, Fertility and sterility.

Pregnancy outcomes decline with increasing body mass index: analysis of 239,127 fresh autologous in vitro fertilization cycles from the 2008-2010 Society for Assisted Reproductive Technology registry.

C. Acharya, J. Goldfarb, S. Muasher, 2016, Fertility and sterility.

SCREENING FOR BIOACTIVE COMPOUNDS OF LEAVES AND ROOT SAMPLES OF Plantago asiatica

C. Acharya, Rahul Oinam, 2018 .

Combination of a novel heat shock protein 90-targeted photodynamic therapy with PD-1/PD-L1 blockade induces potent systemic antitumor efficacy and abscopal effect against breast cancers

Philip F. Hughes, C. Acharya, H. Lyerly, 2022, Journal for ImmunoTherapy of Cancer.

How compliant are in vitro fertilization member clinics in following embryo transfer guidelines? An analysis of 59,689 fresh first in vitro fertilization autologous cycles from 2011 to 2012.

C. Acharya, J. Goldfarb, S. Muasher, 2016, Fertility and sterility.

Freezing of all embryos in in vitro fertilization is beneficial in high responders, but not intermediate and low responders: an analysis of 82,935 cycles from the Society for Assisted Reproductive Technology registry.

C. Acharya, S. Muasher, B. Harris, 2018, Fertility and sterility.

Combination of ultrasound-based mechanical disruption of tumor with immune checkpoint blockade modifies tumor microenvironment and augments systemic antitumor immunity

P. Agarwal, C. Acharya, H. Lyerly, 2022, Journal for ImmunoTherapy of Cancer.

Stimulation of Oncogene-Specific Tumor-Infiltrating T Cells through Combined Vaccine and αPD-1 Enable Sustained Antitumor Responses against Established HER2 Breast Cancer

C. Perou, L. Chodosh, Xiaping He, 2020, Clinical Cancer Research.

Genetic heterogeneity of Myc-induced mammary tumors reflecting diverse phenotypes including metastatic potential

Jeffrey T. Chang, Michael L. Gatza, J. Nevins, 2009, Proceedings of the National Academy of Sciences.

CD47 blockade augmentation of Trastuzumab antitumor efficacy dependent upon antibody-dependent-cellular-phagocytosis.

L. Chodosh, P. Agarwal, C. Acharya, 2019, JCI Insight.

Retraction for Garman et al., A genomic approach to colon cancer risk stratification yields biologic insights into therapeutic opportunities

J. Nevins, Sayan Mukherjee, G. Ginsburg, 2011, Proceedings of the National Academy of Sciences of the United States of America.

A genomic approach to colon cancer risk stratification yields biologic insights into therapeutic opportunities

Elena Edelman, Jochen Gaedcke, Anil Potti, 2008, Proceedings of the National Academy of Sciences.

Complete genomic sequence and analysis of the prion protein gene region from three mammalian species.

Inyoul Y. Lee, L. Hood, S. Prusiner, 1998, Genome research.

HSP90-Specific nIR Probe Identifies Aggressive Prostate Cancers: Translation from Preclinical Models to a Human Phase I Study

Philip F. Hughes, R. Nelson, L. Neckers, 2021, Molecular Cancer Therapeutics.

A novel integrative risk index of papillary thyroid cancer progression combining genomic alterations and clinical factors

T. Hyslop, C. Acharya, J. Sosa, 2017, Oncotarget.

Development of a fertility risk calculator to predict individualized chance of ovarian failure after chemotherapy

C. Acharya, B. Harris, K. Acharya, 2021, Journal of Assisted Reproduction and Genetics.

Retraction. Pharmacogenomic strategies provide a rational approach to the treatment of cisplatin-resistant patients with advanced cancer. J Clin Oncol 25:4350–7, 2007.

H. Dressman, J. Nevins, P. Febbo, 2010, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

Ectopic pregnancy rates in frozen versus fresh embryo transfer in in vitro fertilization: A systematic review and meta-analysis

C. Acharya, S. Muasher, K. Acharya, 2014 .

Gene expression profiles of tumor biology provide a novel approach to prognosis and may guide the selection of therapeutic targets in multiple myeloma.

J. Nevins, F. Zhan, B. Barlogie, 2009, Journal of Clinical Oncology.

The Complete Genome Sequence of Roseobacter denitrificans Reveals a Mixotrophic Rather than Photosynthetic Metabolism

Maeve O’Huallachain, J. Touchman, S. D. Mastrian, 2006, Journal of bacteriology.

Intratumoral Plasmid IL12 Expands CD8+ T Cells and Induces a CXCR3 Gene Signature in Triple-negative Breast Tumors that Sensitizes Patients to Anti–PD-1 Therapy

B. Fox, R. Pierce, C. Acharya, 2021, Clinical Cancer Research.

IL26, a Noncanonical Mediator of DNA Inflammatory Stimulation, Promotes TNBC Engraftment and Progression in Association with Neutrophils

C. Acharya, H. Lyerly, Z. Hartman, 2020, Cancer Research.

Exploiting expression patterns across multiple tissues to map expression quantitative trait loci

Kouros Owzar, Andrew S. Allen, Chaitanya R. Acharya, 2016, BMC Bioinformatics.

Age-specific differences in oncogenic pathway dysregulation and anthracycline sensitivity in patients with acute myeloid leukemia.

K. Metzeler, S. Bohlander, C. Buske, 2009, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

An Integrated Approach to the Prediction of Chemotherapeutic Response in Patients with Breast Cancer

Anil Potti, Sayan Mukherjee, Joseph R. Nevins, 2008, PloS one.

HER2 Isoforms Uniquely Program Intratumor Heterogeneity and Predetermine Breast Cancer Trajectories During the Occult Tumorigenic Phase

R. Cardiff, M. Caron, A. Borowsky, 2021, Molecular Cancer Research.

Characterizing the developmental pathways TTF-1, NKX2–8, and PAX9 in lung cancer

H. Dressman, J. Nevins, Sayan Mukherjee, 2009, Proceedings of the National Academy of Sciences.

Immune Signatures Predict Prognosis in Localized Cancer

P. Febbo, C. Drake, C. Acharya, 2010, Cancer investigation.

Patient and in vitro fertilization (IVF) cycle characteristics associated with variable blastulation rates: a retrospective study from the Duke Fertility Center (2013–2017)

C. Acharya, S. Muasher, K. Acharya, 2019, Middle East Fertility Society Journal.

An age-independent gene signature for monitoring acute rejection in kidney transplantation

A. Kirk, C. Acharya, H. Lyerly, 2020, Theranostics.

Mapping eQTL by leveraging multiple tissues and DNA methylation

Kouros Owzar, Andrew S. Allen, Chaitanya R. Acharya, 2016, BMC Bioinformatics.

Pregnancy Outcomes Decline With Increasing Recipient Body Mass Index: An Analysis of 22,317 Fresh Donor/Recipient Cycles From The 2008–2010 Society For Assisted Reproductive Technology Clinic Outcome Reporting System Registry

C. Acharya, J. Goldfarb, S. Muasher, 2016 .

Ectopic pregnancy rate increases with the number of retrieved oocytes in autologous in vitro fertilization with non-tubal infertility but not donor/recipient cycles: an analysis of 109,140 clinical pregnancies from the Society for Assisted Reproductive Technology registry.

C. Acharya, S. Muasher, K. Acharya, 2015, Fertility and sterility.

Supplementary material for “ Mapping eQTL by leveraging multiple tissues and DNA methylation ”

A. Allen, K. Owzar, C. Acharya, 2017 .

An integrated approach to the prediction of chemotherapeutic response in patients with breast cancer.

H. Dressman, J. Olson, J. Nevins, 2008, PLoS ONE.

Does a freeze-all policy lead to better IVF outcomes in first autologous cycles?

C. Acharya, S. Muasher, B. Harris, 2018, Middle East Fertility Society Journal.

C. Acharya, S. Muasher, K. Acharya, 2015, Fertility and sterility.

A single-cell atlas characterizes dysregulation of the bone marrow immune microenvironment associated with outcomes in multiple myeloma

A. Laganà, S. Lonial, M. Dhodapkar, 2024, bioRxiv.