E. Ganio

发表

Integration of Mechanistic Immunological Knowledge into a Machine Learning Pipeline Increases Predictive Power

Trevor Hastie, Robert Tibshirani, Martin Becker, 2020, bioRxiv.

R. Tibshirani, G. Nolan, G. Shaw, 2017, Science Immunology.

Preferential inhibition of adaptive immune system dynamics by glucocorticoids in patients after acute surgical trauma

Nima Aghaeepour, Martin S. Angst, Ramin Fallahzadeh, 2020, Nature Communications.

Trip12, a HECT domain E3 ubiquitin ligase, targets Sox6 for proteasomal degradation and affects fiber type-specific gene expression in muscle cells

E. Ganio, Chung-Il An, N. Hagiwara, 2013, Skeletal Muscle.

VoPo leverages cellular heterogeneity for predictive modeling of single-cell data

Ramin Fallahzadeh, Nima Aghaeepour, David K. Stevenson, 2020, Nature Communications.

Multiomics Characterization of Preterm Birth in Low- and Middle-Income Countries

S. Quake, G. Shaw, J. Stringer, 2020, JAMA network open.

Deep Immune Profiling of an Arginine-Enriched Nutritional Intervention in Patients Undergoing Surgery

G. Nolan, N. Aghaeepour, D. Gaudillière, 2017, The Journal of Immunology.

Differential Dynamics of the Maternal Immune System in Healthy Pregnancy and Preeclampsia

Amy E. Judy, G. Shaw, N. Aghaeepour, 2019, Front. Immunol..

Systemic Immunologic Consequences of Chronic Periodontitis

N. Aghaeepour, D. Gaudillière, J. Helms, 2019, Journal of dental research.

A proteomic clock of human pregnancy

Robert Tibshirani, Nima Aghaeepour, Mohammad Sajjad Ghaemi, 2017, American journal of obstetrics and gynecology.

Objective Activity Parameters Track Patient-specific Physical Recovery Trajectories After Surgery and Link With Individual Preoperative Immune States

N. Aghaeepour, J. Huddleston, P. Sultan, 2021, Annals of surgery.

Signature for Pain Recovery IN Teens (SPRINT): protocol for a multisite prospective signature study in chronic musculoskeletal pain

J. Stinson, N. Aghaeepour, R. Coghill, 2022, BMJ Open.

Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19

Garry P. Nolan, N. Aghaeepour, D. Gaudillière, 2022, Cell reports. Medicine.

A year-long immune profile of the systemic response in acute stroke survivors

Nima Aghaeepour, Maarten G Lansberg, Quentin Baca, 2019, Brain : a journal of neurology.

Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19

Garry P. Nolan, N. Aghaeepour, D. Gaudillière, 2022, Cell reports. Medicine.

Differential dynamics of bone graft transplantation and mesenchymal stem cell therapy during bone defect healing in a murine critical size defect

Fan Yang, E. Ganio, B. Gaudillière, 2022, Journal of orthopaedic translation.

Expression of specific inflammasome gene modules stratifies older individuals into two extreme clinical and immunological states

Junlei Chang, Vladimir Jojic, Cornelia L Dekker, 2017, Nature Medicine.

Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy

Mark M. Davis, Matthew C. Altman, N. Aghaeepour, 2017, The Journal of Immunology.

Integrated trajectories of the maternal metabolome, proteome, and immunome predict labor onset

G. Shaw, N. Aghaeepour, D. Gaudillière, 2021, Science Translational Medicine.

VoPo leverages cellular heterogeneity for predictive modeling of single-cell data

G. Shaw, N. Aghaeepour, D. Gaudillière, 2020, Nature Communications.

Deep single-cell profiling of the systemic immune response to pregnancy Twenty-one pregnant women receiving routine antepartum care at

R. Tibshirani, G. Nolan, G. Shaw, 2017 .

Integrated plasma proteomic and single-cell immune signaling network signatures demarcate mild, moderate, and severe COVID-19

G. Nolan, N. Aghaeepour, D. Gaudillière, 2021, bioRxiv.

Integration of mechanistic immunological knowledge into a machine learning pipeline improves predictions

Trevor Hastie, Robert Tibshirani, Ramin Fallahzadeh, 2020, Nature Machine Intelligence.

Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy

Bruno Agard, Robert Tibshirani, Nima Aghaeepour, 2018, Bioinform..

A Peripheral Immune Signature of Labor Induction

N. Aghaeepour, D. Stevenson, Y. Blumenfeld, 2021, Frontiers in Immunology.

Clinical recovery from surgery correlates with single-cell immune signatures

Stuart B. Goodman, Garry P. Nolan, Sean C. Bendall, 2014, Science Translational Medicine.

This information is current as in Patients Undergoing Surgery Arginine-Enriched Nutritional Intervention Deep Immune Profiling of an Angst and

G. Nolan, D. Gaudillière, C. Kin, 2017 .

Single-Cell Analysis of the Neonatal Immune System Across the Gestational Age Continuum

N. Aghaeepour, D. Stevenson, A. Tsai, 2021, Frontiers in Immunology.

Human immune system adaptations to simulated microgravity revealed by single-cell mass cytometry

N. Aghaeepour, D. Gaudillière, A. Tsai, 2021, Scientific Reports.

Patient-specific Immune States before Surgery Are Strong Correlates of Surgical Recovery

G. Nolan, N. Aghaeepour, E. Ganio, 2015, Anesthesiology.

Systematic Immunophenotyping Reveals Sex-Specific Responses After Painful Injury in Mice

N. Aghaeepour, A. Culos, E. Ganio, 2020, Frontiers in Immunology.

Expanded vacuum-stable gels for multiplexed high-resolution spatial histopathology

Garry P. Nolan, E. Ganio, M. Bossé, 2023, Nature communications.

Implementing Mass Cytometry at the Bedside to Study the Immunological Basis of Human Diseases: Distinctive Immune Features in Patients with a History of Term or Preterm Birth

Nima Aghaeepour, Ronald J Wong, Gary M Shaw, 2015, Cytometry. Part A : the journal of the International Society for Analytical Cytology.

Integrated Single-cell and Plasma Proteomic Modeling to Predict Surgical Site Complications: A Prospective Cohort Study

N. Aghaeepour, D. Gaudillière, A. Morris, 2021, Annals of surgery.

Stabl: sparse and reliable biomarker discovery in predictive modeling of high-dimensional omic data

N. Aghaeepour, D. Gaudillière, A. Tsai, 2023, Research square.

Mapping the Fetomaternal Peripheral Immune System at Term Pregnancy

G. Nolan, G. Shaw, N. Aghaeepour, 2016, The Journal of Immunology.

Multicenter Systems Analysis of Human Blood Reveals Immature Neutrophils in Males and During Pregnancy

Mark M. Davis, Matthew C. Altman, N. Aghaeepour, 2017, The Journal of Immunology.

Longitudinal clinical phenotyping of post COVID condition in Mexican adults recovering from severe COVID-19: a prospective cohort study

Garry P. Nolan, K. Nadeau, D. Mcilwain, 2023, Frontiers in medicine.

An immune signature of postoperative cognitive decline in elderly patients

N. Aghaeepour, D. Gaudillière, E. Ganio, 2024, bioRxiv.