Li Liao

发表

Combining pairwise sequence similarity and support vector machines for remote protein homology detection

Li Liao, William Stafford Noble, Li Liao, 2002, RECOMB '02.

Combining Pairwise Sequence Similarity and Support Vector Machines for Detecting Remote Protein Evolutionary and Structural Relationships

Li Liao, William Stafford Noble, Li Liao, 2003, J. Comput. Biol..

Prediction of Protein-protein Interaction Sites at Interface Topology Level

Cathy H. Wu, Li Liao, Tianchuan Du, 2013 .

Prediction of missing common genes for disease pairs using network based module separation on incomplete human interactome

Li Liao, P. Akram, 2017, BMC Genomics.

Optimizing nucleotide sequence ensembles for combinatorial protein libraries using a genetic algorithm

Li Liao, Jinquan Luo, R. Craig, 2009, Nucleic acids research.

A Vertical and Horizontal Method for Constructing Phylogenetic Tree

Bo Liao, Wen Zhu, Li Liao, 2010 .

Data Fusion with Optimized Block Kernels in LS-SVM for Protein Classification

Li Liao, 2013 .

Inferring functional linkage from residue level co-evolution information

K. Balasubramanian, Li Liao, R. Craig, 2008, BIOCOMP.

Chapter II Hierarchical Profiling , Scoring and Applications in Bioinformatics

Li Liao, 2018 .

Targeting of plasmodesmal proteins requires unconventional signals

Li Liao, Jung-Youn Lee, Gabriel Robles Luna, 2022, bioRxiv.

Improving Transmembrane Protein Prediction by Increasing the Utilization of Local Information

Li Liao, K. Vijay-Shanker, Colin Kern, 2011, BICoB.

The 2010 ACM International Conference on Bioinformatics and Computational Biology : ACM-BCB 2010 : Niagara Falls, New York, U.S.A., August 2-4, 2010

Armin R. Mikler, Aidong Zhang, Li Liao, 2010 .

Probabilistic Models for Long‐Range Features in Biosequences

Li Liao, Li Liao, 2008 .

Inferring Protein Functional Linkage Based on Sequence Information and Beyond

Li Liao, Li Liao, 2009 .

Completing sparse and disconnected protein-protein network by deep learning

Cathy H. Wu, Li Liao, Lei Huang, 2018, BMC Bioinformatics.

Evolutionary Model Selection and Parameter Estimation for Protein-Protein Interaction Network Based on Differential Evolution Algorithm

Lei Huang, Cathy H. Wu, Li Liao, 2015, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

An improved hidden Markov model for transmembrane protein detection and topology prediction and its applications to complete genomes

Guang R. Gao, Li Liao, Robel Y. Kahsay, 2005, Bioinform..

Prediction and Evaluation of miRNA -- Target Gene Pairs Using K-means Clustering and Bipartite Graphs with Statistical Scoring

Li Liao, Kevin McCormick, Li Liao, 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine.

Genome Comparisons Based on Profiles of Metabolic Pathways

Li Liao, Jean-Francois Tomb, J. Tomb, 2002 .

Correlation Between Gene Silencing Activity and Structural Features of Antisense Oligodeoxynucleotides and Target RNA

Li Liao, Zhongwei Li, Zhongwei Li, 2007, Silico Biol..

Prediction of comorbid diseases using weighted geometric embedding of human interactome

Pakeeza Akram, Li Liao, Li Liao, 2019, BMC Medical Genomics.

Prediction of residue-residue contact matrix for protein-protein interaction with Fisher score features and deep learning.

Cathy H. Wu, Li Liao, Cathy H Wu, 2016, Methods.

Transductive learning with EM algorithm to classify proteins based on phylogenetic profiles

Li Liao, Roger A. Craig, Li Liao, 2007, Int. J. Data Min. Bioinform..

A Discrete Measure for Phylogenetic Construction Based on Information Gain

Bo Liao, Li Liao, Xinyuan Zhou, 2011 .

Predicting Ligand Binding Residues and Functional Sites Using Multipositional Correlations with Graph Theoretic Clustering and Kernel CCA

Cathy H. Wu, Li Liao, Alvaro J. González, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Predicting ligand binding residues using multi-positional correlations and kernel canonical correlation analysis

Cathy H. Wu, Li Liao, Alvaro J. González, 2010, 2010 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

SlopeMiner: An Improved Method for Mining Subtle Signals in Time Course Microarray Data

Li Liao, Kevin McCormick, Roli Shrivastava, 2008, FAW.

Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices

Li Liao, Roger A. Craig, Li Liao, 2007, BMC Bioinformatics.

Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space

Cathy H. Wu, Li Liao, Lei Huang, 2017, PloS one.

Predicting metabolic pathway membership with deep neural networks by integrating sequential and ontology information

Li Liao, I. Cartealy, 2021, BMC Genomics.

Protein-protein interaction prediction based on multiple kernels and partial network with linear programming

Lei Huang, Cathy H. Wu, Li Liao, 2016, BMC Systems Biology.

Protein-protein interaction network inference from multiple kernels with optimization based on random walk by linear programming

Lei Huang, Cathy H. Wu, Li Liao, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

A probabilistic approach to sequence assembly validation

Li Liao, Sun Kim, Jean-François Tomb, 2001, BIOKDD.

Enhancing interacting residue prediction with integrated contact matrix prediction in protein-protein interaction

Cathy H. Wu, Li Liao, Tianchuan Du, 2016, EURASIP J. Bioinform. Syst. Biol..

DDI2PPI: an integrated web server for protein-protein interaction and residue contact matrix predictions

Cathy H. Wu, Li Liao, Hongzhan Huang, 2014, BCB.

Genomic Comparison of Bacterial Species Based on Metabolic Characteristics

Li Liao, Gaurav Jain, Haozhu Wang, 2009, 2009 International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing.

A hybrid approach to assessing spoken fluency combining three metrics with support vector machines

Li Liao, Garrett Molholt, Li Liao, 2011, 2011 4th International Conference on Biomedical Engineering and Informatics (BMEI).

Inference of protein-protein interaction networks from multiple heterogeneous data

Lei Huang, Cathy H. Wu, Li Liao, 2015, EURASIP J. Bioinform. Syst. Biol..

Predicting Protein-Protein Interaction Based on Fisher Scores Extracted from Domain Profiles

Li Liao, Tapan Patel, Tapan P. Patel, 2007, 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering.

Prediction of Antisense Oligonucleotide Efficacy Using Local and Global Structure Information with Support Vector Machines

Li Liao, Roger A. Craig, Li Liao, 2006, 2006 5th International Conference on Machine Learning and Applications (ICMLA'06).

Information of Binding Sites Improves Prediction of Protein-Protein Interaction

Li Liao, Manoj Pillay, Tapan Patel, 2006, 2006 5th International Conference on Machine Learning and Applications (ICMLA'06).

Use of Extended Phylogenetic Profiles with E-Values and Support Vector Machines for Protein Family Classification

Li Liao, Li Liao, Kishore Narra, 2005 .

Transmembrane Protein Inter-Helical Residue Contacts Prediction Using Transductive Support Vector Machines

Li Liao, Bander Almalki, Aman Sawhney, 2022, EPiC series in computing.

Improving Protein–Protein Interaction Prediction Based on Phylogenetic Information Using a Least‐Squares Support Vector Machine

Li Liao, R. Craig, ROGER A. CRAIG, 2007, Annals of the New York Academy of Sciences.

Predicting Interacting Residues Using Long-Distance Information and Novel Decoding in Hidden Markov Models

Li Liao, K. Vijay-Shanker, Alvaro J. González, 2013, IEEE Transactions on NanoBioscience.

Quasi-consensus-based comparison of profile hidden Markov models for protein sequences

Guang R. Gao, Guoli Wang, Li Liao, 2005, Bioinform..

Improving Inter-Helix Contact Prediction With Local 2D Topological Information

Li Liao, Jung-Youn Lee, Jiefu Li, 2023, IEEE/ACM Transactions on Computational Biology and Bioinformatics.