J. Tame

发表

The structural basis for an essential subunit interaction in influenza virus RNA polymerase

E. Obayashi, H. Yoshida, F. Kawai, 2008, Nature.

Crystal structure of unliganded TRAP: implications for dynamic allostery

J. Tame, A. Malay, Masahiro Watanabe, 2010, The Biochemical journal.

Dynamic allostery in the ring protein TRAP.

J. Tame, Sam-Yong Park, J. Heddle, 2007, Journal of molecular biology.

Crystal structure of T state haemoglobin with oxygen bound at all four haems.

M. Paoli, R. Liddington, J. Tame, 1996, Journal of molecular biology.

Intersubunit linker length as a modifier of protein stability: Crystal structures and thermostability of mutant TRAP

I. Yamashita, J. Tame, Sam-Yong Park, 2008, Protein science : a publication of the Protein Society.

The nature of the TRAP–Anti-TRAP complex

J. Tame, Sam-Yong Park, Masahiro Watanabe, 2009, Proceedings of the National Academy of Sciences.

Using the ring-shaped protein TRAP to capture and confine gold nanodots on a surface.

I. Yamashita, J. Tame, J. Heddle, 2007, Small.

Peptide binding in OppA, the crystal structures of the periplasmic oligopeptide binding protein in the unliganded form and in complex with lysyllysine.

E J Dodson, J. Tame, A. Wilkinson, 1997, Biochemistry.

Crystallographic and calorimetric analysis of peptide binding to OppA protein.

J. Tame, J. Ladbury, A. Wilkinson, 1999, Journal of molecular biology.

1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.

Yoshitsugu Shiro, Takeshi Yokoyama, Jeremy R H Tame, 2006, Journal of molecular biology.

Molecular basis of hemoglobin adaptation in the high-flying bar-headed goose

Jeremy R H Tame, J. Tame, Chandrasekhar Natarajan, 2017, bioRxiv.

On Entropy as Mixed-Up-Ness

J. Tame, 2018, Approaches to Entropy.

The structures of deoxy human haemoglobin and the mutant Hb Tyrα42His at 120 K

B. Vallone, J. Tame, 2000 .

The structures of deoxy human haemoglobin and the mutant Hb Tyralpha42His at 120 K.

B. Vallone, J. Tame, 2000, Acta crystallographica. Section D, Biological crystallography.

Computational design of a self-assembling symmetrical β-propeller protein

Hiroki Noguchi, Kam Y. J. Zhang, David Simoncini, 2014, Proceedings of the National Academy of Sciences.

Structural plasticity of a designer protein sheds light on β‐propeller protein evolution

J. Tame, S. Akashi, A. Voet, 2020, The FEBS journal.

Pharmacophore modeling: advances, limitations, and current utility in drug discovery

Kam Y. J. Zhang, Xiao Yin Lee, Arnout Voet, 2014 .

The role of the distal histidine in myoglobin and haemoglobin

Jean-Paul Renaud, Stephen G. Sligar, Barry A. Springer, 1988, Nature.

The stability of the lattice structure in low salt T-state haemoglobin crystals

M. Paoli, R. Liddington, J. Tame, 1993, Proceedings of the Royal Society of London. Series A: Mathematical and Physical Sciences.

Crystal structures of unliganded and half-liganded human hemoglobin derivatives cross-linked between Lys 82beta1 and Lys 82beta2.

N. Shibayama, J. Tame, Sam-Yong Park, 2003, Biochemistry.

Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium

Y. Ikegaya, M. Iseki, Tetsuo Takahashi, 2016, Proceedings of the National Academy of Sciences.

Crystal Structures of the Liganded and Unliganded Nickel-binding Protein NikA from Escherichia coli*

J. Tame, Sam-Yong Park, J. Heddle, 2003, Journal of Biological Chemistry.

Mutational analysis of the substrate specificity of Escherichia coli penicillin binding protein 4.

Thomas B. Clarke, F. Kawai, J. Tame, 2009, Biochemistry.

Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli.

J. Tame, Sam-Yong Park, S. Unzai, 2004, Biochemistry.

Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography.

A. Kidera, S. Fuchigami, M. Ikeguchi, 2007, Acta crystallographica. Section D, Biological crystallography.

Limited tolerance towards folded elements during secretion of the autotransporter Hbp

J. Tame, J. de Gier, T. den Blaauwen, 2007, Molecular microbiology.

Computational design of a symmetrical β-trefoil lectin with cancer cell binding activity

Kam Y. J. Zhang, J. Tame, A. Voet, 2017, Scientific Reports.

Crystal structures of penicillin-binding protein 3 (PBP3) from methicillin-resistant Staphylococcus aureus in the apo and cefotaxime-bound forms.

E. Obayashi, H. Yoshida, F. Kawai, 2012, Journal of molecular biology.

Mutant hemoglobins (alpha 119-Ala and beta 55-Ser): functions related to high-altitude respiration in geese.

J. Tame, T. Jessen, R. Weber, 1993, Journal of applied physiology.

Reverse Engineering Analysis of the High-Temperature Reversible Oligomerization and Amyloidogenicity of PSD95-PDZ3

Jose C. Martínez, J. Tame, S. Kidokoro, 2022, Molecules.

The structure of SeviL, a GM1b/asialo-GM1 binding R-type lectin from the mussel Mytilisepta virgata

T. Ikegami, J. Tame, Sam-Yong Park, 2020, Scientific Reports.

Shape and size complementarity induced formation of supramolecular protein assemblies with metal-oxo clusters

J. Tame, A. Voet, T. Parac‐Vogt, 2020, bioRxiv.

Computational design of symmetrical eight-bladed Beta-propeller proteins

Kam Y. J. Zhang, T. Schiex, J. Tame, 2019 .

Design of tryptophan-containing mutants of the symmetrical Pizza protein for biophysical studies.

J. Tame, A. Voet, H. Noguchi, 2018, Biochemical and biophysical research communications.

The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.

J. Tame, S. Akashi, D. Roper, 2018, Biochemical and biophysical research communications.

The crystal structure and oligomeric form of Escherichia colil,d-carboxypeptidase A.

J. Tame, S. Akashi, D. Roper, 2018, Biochemical and biophysical research communications.

Characterization and crystallization of a novel haemoglobinase from pathogenic Escherichia coli.

J. Tame, B. Oudega, S. J. V. van Dooren, 2002, Acta crystallographica. Section D, Biological crystallography.

Penicillin-Binding Protein 4

J. Tame, D. Roper, 2013 .

Production of human hemoglobin in Escherichia coli using cleavable fusion protein expression vector.

K. Nagai, B. Luisi, J. Tame, 1994, Methods in enzymology.

Structure of the human galanin receptor 2 bound to galanin and Gq reveals the basis of ligand specificity and how binding affects the G-protein interface

J. Tame, Sam-Yong Park, Weontae Lee, 2022, PLoS biology.

Role of domains within the autotransporter Hbp/Tsh.

J. Tame, Sam-Yong Park, S. Unzai, 2010, Acta crystallographica. Section D, Biological crystallography.

The crystal and solution structure of YdiE from Escherichia coli.

Kam Y. J. Zhang, Rojan Shrestha, J. Tame, 2015, Acta crystallographica. Section F, Structural biology communications.

Capturing the hemoglobin allosteric transition in a single crystal form.

N. Shibayama, J. Tame, Sam-Yong Park, 2014, Journal of the American Chemical Society.

The structure of the deacetylase domain of Escherichia coli PgaB, an enzyme required for biofilm formation: a circularly permuted member of the carbohydrate esterase 4 family.

H. Yoshida, J. Tame, Sam-Yong Park, 2013, Acta crystallographica. Section D, Biological crystallography.

NMR-Guided Directed Evolution

J. Tame, O. Makhlynets, I. Korendovych, 2021 .

Generating consistent sets of thermodynamic and structural data for analysis of protein-ligand interactions

J. Tame, R. Hubbard, T. Davies, 2000 .

Order and Disorder in the Domain Organization of the Plasmid Partition Protein KorB

C. Wharton, Christopher M Thomas, J. Tame, 2010, The Journal of Biological Chemistry.

Effect of N-terminal residues on the structural stability of recombinant horse L-chain apoferritin in an acidic environment.

K. Yoshizawa, I. Yamashita, J. Tame, 2007, Journal of biochemistry.

Carnot and Clausius

J. Tame, 2018, Approaches to Entropy.

Protein-templated synthesis of metal-based nanomaterials.

J. Tame, A. Voet, 2017, Current opinion in biotechnology.

Proteolytic analysis of the FliH/FliI complex, the ATPase component of the type III flagellar export apparatus of Salmonella.

R. Macnab, K. Namba, J. Tame, 2001, Journal of molecular biology.

Structural and functional consequences of amino acid substitutions in hemoglobin as manifested in natural and artificial mutants.

K. Nagai, J. Tame, K. Imai, 1989, Protein sequences & data analysis.

The effects of E7 and E11 mutations on the kinetics of ligand binding to R state human hemoglobin.

K. Nagai, J. Tame, J. Olson, 1989, The Journal of biological chemistry.

Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics.

J. Tame, Sam-Yong Park, A. Lloyd, 2006, Biochemistry.

Hybrid assemblies of a symmetric designer protein and polyoxometalates with matching symmetry.

J. Tame, A. Voet, T. Parac‐Vogt, 2020, Chemical communications.

Biomineralization of a Cadmium Chloride Nanocrystal by a Designed Symmetrical Protein.

Hiroki Noguchi, Kam Y. J. Zhang, Kam Y J Zhang, 2015, Angewandte Chemie.

Hemoglobin allostery and pharmacology.

J. Tame, A. Bellelli, 2021, Molecular aspects of medicine.

Direct observation of conformational population shifts in crystalline human hemoglobin

N. Shibayama, J. Tame, Sam-Yong Park, 2017, The Journal of Biological Chemistry.

Site-directed mutagenesis in haemoglobin: Functional role of tyrosine-42(C7)α at the α1-β2 interface☆

Y. Wada, J. Tame, K. Imai, 1991 .

Novel Mechanisms of pH Sensitivity in Tuna Hemoglobin

J. Tame, Sam-Yong Park, H. Morimoto, 2004, Journal of Biological Chemistry.

Molecular mechanism of photoactivation of a light-regulated adenylate cyclase

M. Iseki, N. Shibayama, J. Tame, 2017, Proceedings of the National Academy of Sciences.

Seeing the light with BLUF proteins

J. Tame, Sam-Yong Park, Sam-Yong Park, 2017, Biophysical Reviews.

Mutagenic Studies on the Origins of the Root Effect

K. Nagai, J. Tame, Sam-Yong Park, 2008 .

Structural Basis of Sequential and Concerted Cooperativity

E. Di Cera, J. Tame, A. Bellelli, 2022, Biomolecules.

The crystal structures of trout Hb I in the deoxy and carbonmonoxy forms.

J. Tame, R. Weber, J. Wilson, 1996, Journal of molecular biology.

Unraveling the Photoactivation Mechanism of a Light-Activated Adenylyl Cyclase Using Ultrafast Spectroscopy Coupled with Unnatural Amino Acid Mutagenesis

András Lukács, G. M. Greetham, M. Towrie, 2022, ACS chemical biology.

R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35.

J. Tame, Sam-Yong Park, T. Yonetani, 2006, Journal of molecular biology.

A GM1b/asialo‐GM1 oligosaccharide‐binding R‐type lectin from purplish bifurcate mussels Mytilisepta virgata and its effect on MAP kinases

J. Tame, M. Gerdol, A. Pallavicini, 2019, The FEBS journal.

Computational design of a symmetrical β-trefoil lectin with cancer cell binding activity

Kam Y. J. Zhang, J. Tame, A. Voet, 2017, Scientific Reports.

Crystal structure of MytiLec, a galactose-binding lectin from the mussel Mytilus galloprovincialis with cytotoxicity against certain cancer cell types

F. Kawai, J. Tame, Sam-Yong Park, 2016, Scientific Reports.

Effect of the distal residues on the vibrational modes of the Fe-CO bond in hemoglobin studied by protein engineering.

K. Nagai, J. Tame, J. Renaud, 1990, Biochemistry.

Pumping mechanism of NM-R3, a light-driven bacterial chloride importer in the rhodopsin family

Jae-Hyun Park, N. Shibayama, J. Tame, 2020, Science Advances.

Molecular assemblies built with the artificial protein Pizza

J. Tame, A. Voet, R. Jerala, 2020, Journal of structural biology: X.

Substitutions in woolly mammoth hemoglobin confer biochemical properties adaptive for cold tolerance

N. Rohland, C. Ho, M. Hofreiter, 2010, Nature Genetics.

Crystal Structure of Hemoglobin Protease, a Heme Binding Autotransporter Protein from Pathogenic Escherichia coli*

J. Tame, Sam-Yong Park, J. Heddle, 2005, Journal of Biological Chemistry.

The role of water in sequence-independent ligand binding by an oligopeptide transporter protein

John E. Ladbury, Anthony J. Wilkinson, J. Tame, 1996, Nature Structural Biology.

Expression, purification and crystallization of 2-oxo-hept-4-ene-1,7-dioate hydratase (HpcG) from Escherichia coli C

J. Tame, Sam-Yong Park, A. Izumi, 2006, Acta crystallographica. Section F, Structural biology and crystallization communications.

Structural insights into the HBV receptor and bile acid transporter NTCP

M. Muramatsu, H. Yoshida, J. Tame, 2022, Nature.

Crystal Structures of Deoxy- and Carbonmonoxyhemoglobin F1 from the Hagfish Eptatretus burgeri *

Hideki Morimoto, Shin-ichi Adachi, Jeremy R H Tame, 2002, The Journal of Biological Chemistry.

A novel intein-like autoproteolytic mechanism in autotransporter proteins.

F. Kawai, J. Tame, Sam-Yong Park, 2010, Journal of molecular biology.

Evolution and molecular basis of a novel allosteric property of crocodilian hemoglobin

J. Tame, F. Hoffmann, Chandrasekhar Natarajan, 2022, Current Biology.

The structural basis of sequence-independent peptide binding by OppA protein.

G N Murshudov, E J Dodson, G G Dodson, 1994, Science.

The crystal structure of a high oxygen affinity species of haemoglobin (bar-headed goose haemoglobin in the oxy form).

G. Lu, J. Tame, J. Zhang, 1996, Journal of molecular biology.

Crystal structure of elongation factor P from Thermus thermophilus HB8.

S. Yokoyama, J. Tame, T. Terada, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Adaptation of bird hemoglobins to high altitudes: demonstration of molecular mechanism by protein engineering.

J. Tame, T. Jessen, R. Weber, 1991, Proceedings of the National Academy of Sciences of the United States of America.

A Conserved Aromatic Residue in the Autochaperone Domain of the Autotransporter Hbp Is Critical for Initiation of Outer Membrane Translocation*

J. Tame, T. den Blaauwen, W. Jong, 2010, The Journal of Biological Chemistry.

Purification of the autotransporter protein Hbp of Escherichia coli.

J. Tame, B. Oudega, J. Luirink, 2001, FEMS microbiology letters.

Structural Basis for Broad Detection of Genogroup II Noroviruses by a Monoclonal Antibody That Binds to a Site Occluded in the Viral Particle

David W. Taylor, I. Georgiev, J. Tame, 2012, Journal of Virology.

Structures of haemoglobin from woolly mammoth in liganded and unliganded states.

C. Ho, J. Tame, Sam-Yong Park, 2012, Acta crystallographica. Section D, Biological crystallography.

Genetic Engineering of Hemoglobin

J. Tame, 2006 .

HAEMOGLOBIN WITH A(L)TITUDE

J. Tame, 2003, Journal of Experimental Biology.

The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.

J. Tame, Sam-Yong Park, H. Morimoto, 2001, Journal of molecular biology.

Transplanting a unique allosteric effect from crocodile into human haemoglobin

K. Nagai, J. Tame, N. Komiyama, 1995, Nature.

Biophysical reviews ‘meet the editor series’–Jeremy R. H. Tame

Jeremy R H Tame, J. Tame, 2021, Biophysical Reviews.

Was the loss of the D helix in α globin a functionally neutral mutation?

K. Nagai, J. Tame, N. Komiyama, 1991, Nature.

Crystal structure of the GTP-binding protein Obg from Thermus thermophilus HB8.

S. Yokoyama, J. Tame, T. Terada, 2004, Journal of molecular biology.

Development and applications of artificial symmetrical proteins

Jeroen P.M. Vrancken, Jeremy R.H. Tame, Arnout R.D. Voet, 2020, Computational and structural biotechnology journal.

Structure and mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

S. Yokoyama, J. Tame, Sam-Yong Park, 2005 .

The Dimerization Interface of the Metastasis-associated Protein S100A4 (Mts1)

J. Tame, D. Scott, N. Maitland, 2001, The Journal of Biological Chemistry.

Autotransporter passenger proteins: virulence factors with common structural themes

J. Tame, Sam-Yong Park, Y. Yoon, 2010, Journal of Molecular Medicine.

Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8

Kengo Kinoshita, Haruki Nakamura, Motonori Ota, 2003, Protein science : a publication of the Protein Society.

Crystal structure of a novel polyisoprenoid‐binding protein from Thermus thermophilus HB8

S. Yokoyama, J. Tame, Sam-Yong Park, 2005, Protein science : a publication of the Protein Society.

Structural insight into the essential PB1–PB2 subunit contact of the influenza virus RNA polymerase

E. Obayashi, A. Kawaguchi, K. Nagata, 2009, The EMBO journal.

The crystal structures of the oligopeptide-binding protein OppA complexed with tripeptide and tetrapeptide ligands.

C. Higgins, J. Tame, A. Wilkinson, 1995, Structure.

Crystal Structure of 4-(Cytidine 5′-diphospho)-2-C-methyl-d-erythritol kinase, an Enzyme in the Non-mevalonate Pathway of Isoprenoid Synthesis*

S. Yokoyama, J. Tame, Sam-Yong Park, 2003, Journal of Biological Chemistry.

Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.

S. Yokoyama, J. Tame, Sam-Yong Park, 2003, Acta crystallographica. Section D, Biological crystallography.

Structure and mechanism of HpcG, a hydratase in the homoprotocatechuate degradation pathway of Escherichia coli.

J. Tame, Sam-Yong Park, S. Unzai, 2007, Journal of molecular biology.

Structure of a conserved CoA-binding protein synthesized by a cell-free system.

T. Kigawa, S. Yokoyama, J. Tame, 2003, Acta crystallographica. Section D, Biological crystallography.

Specificity and interactions of the protein OppA: partitioning solvent binding effects using mass spectrometry.

C. Robinson, J. Tame, J. Ladbury, 2000, Journal of molecular biology.

The crystal structure of HpcE, a bifunctional decarboxylase/isomerase with a multifunctional fold.

K. Namba, J. Tame, E. Dodson, 2002, Biochemistry.

Direct observation of photolysis-induced tertiary structural changes in hemoglobin

N. Shibayama, J. Tame, Sam-Yong Park, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Crystal structure of horse carbonmonoxyhemoglobin-bezafibrate complex at 1.55-A resolution. A novel allosteric binding site in R-state hemoglobin.

Takashi Yonetani, N. Shibayama, J. Tame, 2002 .

What is the true structure of liganded haemoglobin?

J. Tame, 1999, Trends in biochemical sciences.

Functional role of the distal valine (E11) residue of α subunits in human haemoglobin

K. Nagai, J. Tame, G. Fermi, 1991 .

Evolution of Hemoglobin as Studied by Protein Engineering and X-Ray Crystallography

K. Nagai, D. Altschuh, J. Tame, 1988 .

Structure determination of OppA at 2.3 A resolution using multiple-wavelength anomalous dispersion methods.

E J Dodson, J. Tame, A. Wilkinson, 1995, Acta crystallographica. Section D, Biological crystallography.

Editors’ roundup: April 2023

J. Tame, K. Shearwin, D. Hall, 2022, Biophysical Reviews.

The Taming of the Screw: the natural and artificial development of β-propeller proteins.

J. Tame, A. Voet, B. Mylemans, 2020, Current opinion in structural biology.

Editorial for the Special Issue of Biophysical Reviews focused on the Biophysical Society of Japan with select scientific content from the 57th BSJ annual meeting, Miyazaki, Japan

Haruki Nakamura, J. Tame, T. Komatsuzaki, 2020, Biophysical Reviews.

Approaches to Entropy

Jeremy R. H. Tame, J. Tame, 2018 .

Computational design of symmetrical eight-bladed β-propeller proteins

Thomas Schiex, Hiroki Noguchi, Kam Y. J. Zhang, 2019, IUCrJ.

Early-stage dynamics of chloride ion–pumping rhodopsin revealed by a femtosecond X-ray laser

S. Boutet, R. Sierra, M. Hunter, 2021, Proceedings of the National Academy of Sciences.

Characterization of an iron-regulated alpha-enolase of Bacteroides fragilis.

J. Tame, B. Oudega, T. den Blaauwen, 2005, Microbes and infection.

The Crystal Structure of the Active Domain of Anopheles Anti-platelet Protein, a Powerful Anti-coagulant, in Complex with an Antibody*

J. Tame, Sam-Yong Park, S. Akashi, 2014, The Journal of Biological Chemistry.

Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters

J. Tame, A. Voet, T. Parac‐Vogt, 2021 .

Influence of circular permutations on the structure and stability of a six‐fold circular symmetric designer protein

J. Tame, A. Voet, H. Noguchi, 2020, Protein science : a publication of the Protein Society.

The symmetric designer protein Pizza as a scaffold for metal coordination

Kam Y. J. Zhang, J. Tame, A. Voet, 2021, Proteins.

Rounding up: Engineering 12-membered rings from the cyclic 11-mer TRAP.

I. Yamashita, J. Tame, Sam-Yong Park, 2006, Structure.

Evolution-Inspired Computational Design of Symmetric Proteins.

Kam Y. J. Zhang, David Simoncini, Kam Y J Zhang, 2017, Methods in molecular biology.

Relating structure to thermodynamics: The crystal structures and binding affinity of eight OppA‐peptide complexes

R E Hubbard, J. Tame, R. Hubbard, 1999, Protein science : a publication of the Protein Society.

Crystal structures of Scone, pseudosymmetric folding of a symmetric designer protein

J. Tame, A. Voet, T. Parac‐Vogt, 2021, bioRxiv.

Enzyme dynamics—a brief review

J. Tame, 2023, Biophysical Reviews.

Interactions of FliJ with the Salmonella Type III Flagellar Export Apparatus

R. Macnab, J. Tame, G. Fraser, 2003, Journal of bacteriology.

Autotransporter protein secretion

J. Tame, 2011, Biomolecular concepts.

Crystal structures of penicillin-binding proteins 4 and 5 from Haemophilus influenzae.

Thomas B. Clarke, E. Obayashi, F. Kawai, 2010, Journal of molecular biology.

The assignment of carbon monoxide association rate constants to the alpha and beta subunits in native and mutant human deoxyhemoglobin tetramers.

K. Nagai, J. Tame, J. Olson, 1991, The Journal of biological chemistry.

Backbone 1H, 13C and 15N assignments of a 59 kDa Salmonella typhimurium periplasmic oligopeptide binding protein, OppA

J. Tame, M. Wälchli, Yutaka Ito, 2007, Biomolecular NMR assignments.

Crystal structure of the computationally designed Tako8 protein in C2

Kam Y. J. Zhang, T. Schiex, J. Tame, 2018 .

The structure and conformational switching of Rap1B.

T. Ikegami, J. Tame, Sam-Yong Park, 2015, Biochemical and biophysical research communications.

Scoring functions: A view from the bench

Jeremy R. H. Tame, J. Tame, 1999, J. Comput. Aided Mol. Des..

Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8

Shigeyuki Yokoyama, Seiki Kuramitsu, Mikako Shirouzu, 2004 .

Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8

S. Yokoyama, J. Tame, Sam-Yong Park, 2004, Proteins.

Low resolution solution structure of the Apo form of Escherichia coli haemoglobin protease Hbp.

J Günter Grossmann, Keith S Wilson, Olwyn Byron, 2002, Journal of molecular biology.

Structures of haemoglobin from woolly mammoth in liganded and unliganded states.

C. Ho, J. Tame, Sam-Yong Park, 2012, Acta crystallographica. Section D, Biological crystallography.

Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2

M. Ikeguchi, J. Tame, Toru Ekimoto, 2023, Nature communications.

Structural insight into the essential PB1–PB2 subunit contact of the influenza virus RNA polymerase

E. Obayashi, K. Nagata, J. Tame, 2009, The EMBO journal.

Structural basis of CXC chemokine receptor 1 ligand binding and activation

M. Tajiri, J. Tame, Sam-Yong Park, 2023, Nature communications.

Influence of Structural Symmetry on Protein Dynamics

M. Ota, A. Kidera, R. Koike, 2012, PloS one.

Order and Disorder in the Domain Organization of the Plasmid Partition Protein KorB

C. Wharton, Christopher M Thomas, J. Tame, 2010, The Journal of Biological Chemistry.

Structural Basis for Broad Detection of Genogroup II Noroviruses by a Monoclonal Antibody That Binds to a Site Occluded in the Viral Particle

David W. Taylor, I. Georgiev, J. Tame, 2012, Journal of Virology.

Structural basis for the recognition of human hemoglobin by the heme-acquisition protein Shr from Streptococcus pyogenes

J. Tame, Makoto Nakakido, S. Nagatoishi, 2024, Scientific reports.

1P034 Novel Mechanisms of pH sensitivity in tuna hemoglobin : a structural explanation of the Root effect

J. Tame, H. Morimoto, K. T. Chong, 2004 .

NMR-guided directed evolution

J. Tame, O. Makhlynets, I. Korendovych, 2022, Nature.