C. Elkins

发表

Insular Microbiogeography: Three Pathogens as Exemplars.

David D. Chambliss, Kristen L. Beck, B. Weimer, 2019, Current issues in molecular biology.

Application of Metagenomic Sequencing to Food Safety: Detection of Shiga Toxin-Producing Escherichia coli on Fresh Bagged Spinach

Susan R. Leonard, Christopher A. Elkins, David W. Lacher, 2015, Applied and Environmental Microbiology.

Insular Microbiogeography: Three Pathogens as Exemplars

David D. Chambliss, Kristen L. Beck, B. Weimer, 2019, Microbial Ecology: Current Advances from Genomics, Metagenomics and Other Omics.

Insular microbiogeography

David D. Chambliss, Kristen L. Beck, B. Weimer, 2017, 1703.07454.

Difficult-To-Detect Staphylococcus aureus: mecA-Positive Isolates Associated with Oxacillin and Cefoxitin False-Susceptible Results

Amy S. Gargis, C. Elkins, K. Anderson, 2020, Journal of Clinical Microbiology.

Mammalian Steroid Hormones Are Substrates for the Major RND- and MFS-Type Tripartite Multidrug Efflux Pumps of Escherichia coli

Christopher A. Elkins, C. Elkins, Lisa B. Mullis, 2006, Journal of bacteriology.

Antimicrobial Drug Efflux Pumps in Other Gram-Positive Bacteria

C. Elkins, N. Baranova, 2016 .

Substrate Competition Studies Using Whole-Cell Accumulation Assays with the Major Tripartite Multidrug Efflux Pumps of Escherichia coli

C. Elkins, L. Mullis, 2007, Antimicrobial Agents and Chemotherapy.

Bile-Mediated Aminoglycoside Sensitivity in Lactobacillus Species Likely Results from Increased Membrane Permeability Attributable to Cholic Acid

C. Elkins, L. Mullis, 2004, Applied and Environmental Microbiology.

Identification of Genes Encoding Conjugated Bile Salt Hydrolase and Transport in Lactobacillus johnsonii100-100

C. Elkins, D. Savage, 1998, Journal of bacteriology.

DNA microarray-based assessment of virulence potential of Shiga toxin gene-carrying Escherichia coli O104:H7 isolated from feedlot cattle feces

C. Elkins, I. Patel, T. Nagaraja, 2018, PloS one.

Development and utility of the FDA ‘GutProbe’ DNA microarray for identification, genotyping and metagenomic analysis of commercially available probiotics

C. Elkins, M. Mammel, P. Ramachandran, 2015, Journal of applied microbiology.

Identification of a Carbapenemase-Producing Hypervirulent Klebsiella pneumoniae Isolate in the United States

Richard A. Stanton, C. Elkins, M. Karlsson, 2019, Antimicrobial Agents and Chemotherapy.

Acetylation of fluoroquinolone antimicrobial agents by an Escherichia coli strain isolated from a municipal wastewater treatment plant

C. Elkins, J. Sutherland, C. Jung, 2009, Journal of applied microbiology.

Modeling the tripartite drug efflux pump archetype: structural and functional studies of the macromolecular constituents reveal more than their names imply.

C. Elkins, K. Beenken, 2005, Journal of chemotherapy.

CbsT2 from Lactobacillus johnsonii 100-100 Is a Transport Protein of the Major Facilitator Superfamily That Facilitates Bile Acid Antiport

C. Elkins, D. Savage, 2004, Journal of Molecular Microbiology and Biotechnology.

Diversity and Antimicrobial Resistance of Salmonella enterica Isolates from Surface Water in Southeastern United States

Shaohua Zhao, C. Elkins, A. Wright, 2014, Applied and Environmental Microbiology.

Investigation of potential Shiga toxin producing Escherichia coli (STEC) associated with a local foodborne outbreak using multidisciplinary approaches

C. Elkins, I. Patel, Niketa M. Jani, 2016 .

Genomic Evidence Reveals Numerous Salmonella enterica Serovar Newport Reintroduction Events in Suwannee Watershed Irrigation Ponds

S. Jackson, C. Elkins, J. Gangiredla, 2015, Applied and Environmental Microbiology.

Detection of Live Escherichia coli O157:H7 Cells by PMA-qPCR

C. Elkins, Baoguang Li, Zonglin Hu, 2014, Journal of visualized experiments : JoVE.

A Vegetable Fermentation Facility Hosts Distinct Microbiomes Reflecting the Production Environment

C. Elkins, M. Mammel, M. Kotewicz, 2018, Applied and Environmental Microbiology.

Genes encoding bile salt hydrolases and conjugated bile salt transporters in Lactobacillus johnsonii 100-100 and other Lactobacillus species.

C. Elkins, D. Savage, S. Moser, 2001, Microbiology.

Advancements in Microarray Utility for Detection and Tracking of Foodborne Microbes in the Genomic Era

C. Elkins, I. Patel, B. Tall, 2017 .

Draft Genome Sequences of Ciprofloxacin-Resistant Salmonella enterica Strains with Multiple-Antibiotic Resistance, Isolated from Imported Foods

C. Elkins, B. Khajanchi, Ashraf A. Khan, 2017, Genome Announcements.

Complete Genome Sequence of Human Norovirus Strain GII.P7-GII.6 Detected in a Patient in the United States in 2014

J. Vinjé, C. Elkins, Zhihui Yang, 2016, Genome Announcements.

Genetic Analysis of Virulence Potential of Escherichia coli O104 Serotypes Isolated From Cattle Feces Using Whole Genome Sequencing

C. Elkins, I. Patel, T. Nagaraja, 2018, Front. Microbiol..

Draft Genome Sequences of Escherichia coli O104 Strains of Bovine and Human Origin

C. Elkins, M. Mammel, I. Patel, 2017, Genome Announcements.

Diversity and Antimicrobial Resistance of Salmonella enterica Isolated from Surface Water

Shaohua Zhao, C. Elkins, A. Wright, 2014 .

in Southeastern United States Salmonella enterica Isolates from Surface Diversity and Antimicrobial Resistance of

Shaohua Zhao, C. Elkins, A. Wright, 2014 .

Draft Genome Sequences of 72 Isolates from All Four Species of Shigella

S. Jackson, C. Elkins, M. Mammel, 2018, Microbiology Resource Announcements.

Use of the Escherichia coli Identification Microarray for Characterizing the Health Risks of Shiga Toxin-Producing Escherichia coli Isolated from Foods.

C. Elkins, I. Patel, J. Gangiredla, 2016, Journal of food protection.

Novel Microarray Design for Molecular Serotyping of Shiga Toxin-Producing Escherichia coli Strains Isolated from Fresh Produce

S. Jackson, C. Elkins, J. Gangiredla, 2014, Applied and Environmental Microbiology.

Modeling the Tripartite Drug Efflux Pump Archetype: Structural and Functional Studies of the Macromolecular Constituents Reveal More Than Their Names Imply

C. Elkins, K. Beenken, 2005, Journal of chemotherapy.

Neisserial iron regulated stress proteins : What do they do ? What can we do with them ?

C. Elkins, P. Sparling, Jeremiah Anderson, 2002 .

Species-Wide Collection of Escherichia coli Isolates for Examination of Genomic Diversity

Susan R. Leonard, C. Elkins, M. Mammel, 2017, Genome Announcements.

Performance of Oropharyngeal Swab Testing Compared With Nasopharyngeal Swab Testing for Diagnosis of Coronavirus Disease 2019—United States, January 2020–February 2020

Emily N. Ussery, S. Lindstrom, J. Brooks, 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Performance of Oropharyngeal Swab Testing Compared With Nasopharyngeal Swab Testing for Diagnosis of Coronavirus Disease 2019-United States, January 2020-February 2020.

Emily N. Ussery, S. Lindstrom, J. Brooks, 2021, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

COVID-19 in Americans aboard the Diamond Princess cruise ship

Anna M. Acosta, Ryan T Novak, M. Cetron, 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Lactobacillus-mediated inhibition of clinical toxic shock syndrome Staphylococcus aureus strains and its relation to acid and peroxide production.

C. Elkins, R. Stingley, L. Mullis, 2008, Anaerobe.

Interaction of dietary resveratrol with animal-associated bacteria.

C. Elkins, J. Sutherland, C. Jung, 2009, FEMS microbiology letters.

Chimeric Analysis of AcrA Function Reveals the Importance of Its C-Terminal Domain in Its Interaction with the AcrB Multidrug Efflux Pump

C. Elkins, H. Nikaido, 2003, Journal of bacteriology.

Human Gut-On-A-Chip Supports Polarized Infection of Coxsackie B1 Virus In Vitro

James C. Weaver, Donald E. Ingber, Christopher A. Elkins, 2017, PloS one.

carbon dioxide levels during and post menses In vivo assessment of human vaginal oxygen and

Li-Rong Yu, C. Elkins, P. Schlievert, 2015 .

Antibodies specific for nucleic acids and applications in genomic detection and clinical diagnostics

C. Elkins, S. Leppla, Stephen H Leppla, 2014, Expert review of molecular diagnostics.

Towards next-generation sequencing analytics for foodborne RNA viruses: Examining the effect of RNA input quantity and viral RNA purity.

Susan R. Leonard, C. Elkins, M. Mammel, 2016, Journal of virological methods.

Staphylococcus aureus toxic shock syndrome toxin-1 (TSST-1) production and Lactobacillus species growth in a defined medium simulating vaginal secretions.

C. Elkins, R. Stingley, L. Mullis, 2014, Journal of microbiological methods.

Genomic paradigms for food-borne enteric pathogen analysis at the USFDA: case studies highlighting method utility, integration and resolution

C. Elkins, I. Patel, M. Kotewicz, 2013, Food additives & contaminants. Part A, Chemistry, analysis, control, exposure & risk assessment.

Rapid Genomic-Scale Analysis of Escherichia coli O104:H4 by Using High-Resolution Alternative Methods to Next-Generation Sequencing

S. Jackson, C. Elkins, I. Patel, 2011, Applied and Environmental Microbiology.

Sentinel Surveillance Reveals Emerging Daptomycin-Resistant ST736 Enterococcus faecium and Multiple Mechanisms of Linezolid Resistance in Enterococci in the United States

Amy S. Gargis, C. Elkins, D. Batra, 2022, Frontiers in Microbiology.

Application of next generation sequencing toward sensitive detection of enteric viruses isolated from celery samples as an example of produce.

C. Elkins, M. Mammel, Kaoru Hida, 2017, International journal of food microbiology.

Human Gut-OnA-Chip Supports Polarized Infection of Coxsackie B 1 Virus In Vitro

James C. Weaver, Donald E. Ingber, Christopher A. Elkins, 2017 .

Genetic and resistance phenotypic subtyping of Salmonella Saintpaul isolates from various food sources and humans: Phylogenetic concordance in combinatory analyses.

P. McDermott, Shaohua Zhao, C. Elkins, 2015, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

FDA Escherichia coli Identification (FDA-ECID) Microarray: a Pangenome Molecular Toolbox for Serotyping, Virulence Profiling, Molecular Epidemiology, and Phylogeny

S. Jackson, C. Elkins, M. Mammel, 2016, Applied and Environmental Microbiology.

Development of a Tiered Multilocus Sequence Typing Scheme for Members of the Lactobacillus acidophilus Complex

C. Elkins, P. Ramachandran, D. Lacher, 2013, Applied and Environmental Microbiology.

Inhibition of Staphylococcus aureus by Lysostaphin-Expressing Lactobacillus plantarum WCFS1 in a Modified Genital Tract Secretion Medium

Li-Rong Yu, C. Elkins, Richard C. Jones, 2011, Applied and Environmental Microbiology.

Substrate Specificity of the RND-Type Multidrug Efflux Pumps AcrB and AcrD of Escherichia coli Is Determined Predominately by Two Large Periplasmic Loops

C. Elkins, H. Nikaido, 2002, Journal of bacteriology.

Efflux-Mediated Antimicrobial Resistance in Bacteria

C. Elkins, H. Zgurskaya, Xian-Zhi Li, 2016, Springer International Publishing.

Strain-Level Discrimination of Shiga Toxin-Producing Escherichia coli in Spinach Using Metagenomic Sequencing

Susan R. Leonard, Christopher A. Elkins, David W. Lacher, 2016, PloS one.

Draft Genome Sequences of the Escherichia coli Reference (ECOR) Collection

C. Elkins, M. Mammel, I. Patel, 2018, Microbiology Resource Announcements.

Draft Genome Sequences of Bifidobacterium Strains Isolated from Dietary Supplements and Cultured Food Products

C. Elkins, M. Mammel, J. Gangiredla, 2018, Genome Announcements.

A Proteomic and Transcriptomic Approach Reveals New Insight into β-methylthiolation of Escherichia coli Ribosomal Protein S12*

N. Costantino, D. Court, C. Elkins, 2010, Molecular & Cellular Proteomics.

Draft Genome Sequences of Escherichia albertii, Escherichia fergusonii, and Strains Belonging to Six Cryptic Lineages of Escherichia spp.

Susan R. Leonard, C. Elkins, M. Mammel, 2018, Genome Announcements.

Epidemiology of extended-spectrum β-lactamase–producing Enterobacterales in five US sites participating in the Emerging Infections Program, 2017

Richard A. Stanton, C. Elkins, S. Magill, 2022, Infection Control & Hospital Epidemiology.

3D structure of AcrB: the archetypal multidrug efflux transporter of Escherichia coli likely captures substrates from periplasm.

C. Elkins, H. Nikaido, 2003, Drug resistance updates : reviews and commentaries in antimicrobial and anticancer chemotherapy.

Molecular Characterization of Carbapenem-Resistant Enterobacterales Collected in the United States.

R. Lynfield, C. Elkins, A. Kallen, 2022, Microbial drug resistance.

Assessing the in vitro impact of ceftazidime on aztreonam/avibactam susceptibility testing for highly resistant MBL-producing Enterobacterales.

C. Elkins, J. Patel, K. Anderson, 2020, The Journal of antimicrobial chemotherapy.

Validation of Aztreonam-Avibactam Susceptibility Testing Using Digitally Dispensed Custom Panels

C. Elkins, J. Patel, K. Anderson, 2020, Journal of Clinical Microbiology.

Complete Genome Sequence of a Human Sapovirus GI.2 Variant, Isolated from a Patient in Ireland in 2016

C. Elkins, S. Coughlan, Zhihui Yang, 2017, Genome Announcements.

Detection and Characterization of Targeted Carbapenem-Resistant Health Care-Associated Threats: Findings from the Antibiotic Resistance Laboratory Network, 2017 to 2019

Richard A. Stanton, C. Elkins, M. Karlsson, 2021, Antimicrobial agents and chemotherapy.

Culture-Independent Metagenomic Surveillance of Commercially Available Probiotics with High-Throughput Next-Generation Sequencing

Christopher A. Elkins, Jennifer N. Patro, Padmini Ramachandran, 2016, mSphere.

Framing Bacterial Genomics for Public Health (Care)

C. Elkins, L. McDonald, A. Halpin, 2021, Journal of clinical microbiology.

Single Nucleotide Polymorphism Analysis of the Major Tripartite Multidrug Efflux Pump of Escherichia coli: Functional Conservation in Disparate Animal Reservoirs despite Exposure to Antimicrobial Chemotherapy

C. Elkins, C. Jung, D. Lacher, 2009, Antimicrobial Agents and Chemotherapy.

A metallo-β-lactamase is responsible for the degradation of ceftiofur by the bovine intestinal bacterium Bacillus cereus P41.

C. Elkins, C. Cerniglia, T. Heinze, 2014, Veterinary microbiology.

Fifty-Six Draft Genome Sequences of 10 Lactobacillus Species from 22 Commercial Dietary Supplements

C. Elkins, M. Mammel, J. Gangiredla, 2018, Genome Announcements.

Interlaboratory Evaluation of the U.S. Food and Drug Administration Escherichia coli Identification Microarray for Profiling Shiga Toxin-Producing Escherichia coli.

P. Fratamico, C. Elkins, M. Mammel, 2018, Journal of food protection.