H. A. van den Berg

发表

A Single Autoimmune T Cell Receptor Recognizes More Than a Million Different Peptides*

D. Price, A. Sewell, John J Miles, 2011, The Journal of Biological Chemistry.

Identification of uterine pacemaker regions at the myometrial-placental interface

H. A. van den Berg, W. Lammers, E. Lutton, 2017, bioRxiv.

Eradication-resolution dynamics with stochastic flare-ups.

H. A. van den Berg, Zoe A Duncombe, 2010, Journal of theoretical biology.

Inceptions of Biomathematics from Lotka to Thom

H. A. van den Berg, 2017, Science progress.

Interaction between the CD8 Coreceptor and Major Histocompatibility Complex Class I Stabilizes T Cell Receptor-Antigen Complexes at the Cell Surface*

Andrew K. Sewell, Meir Glick, Daniel C. Douek, 2005, Journal of Biological Chemistry.

Coreceptor CD8-driven modulation of T cell antigen receptor specificity.

A. Sewell, L. Wooldridge, H. A. van den Berg, 2007, Journal of theoretical biology.

Tricks with tetramers: how to get the most from multimeric peptide–MHC

D. Price, A. Sewell, L. Wooldridge, 2009, Immunology.

Stochastic niche structure and diversity maintenance in the T cell repertoire.

Carmen Molina-París, H. A. van den Berg, C. Molina-París, 2008, Journal of theoretical biology.

Dynamics of T cell activation threshold tuning.

David A Rand, D. Rand, H. A. van den Berg, 2004, Journal of theoretical biology.

Stochastic competitive exclusion in the maintenance of the naïve T cell repertoire.

H. A. van den Berg, G. Lythe, C. Molina-París, 2010, Journal of theoretical biology.

GPU-Accelerated Discovery of Pathogen-Derived Molecular Mimics of a T-Cell Insulin Epitope

A. Sewell, L. Wooldridge, H. A. van den Berg, 2020, Frontiers in Immunology.

Cellular-Level Versus Receptor-Level Response Threshold Hierarchies in T-Cell Activation

A. Sewell, K. Ladell, E. Gostick, 2013, Front. Immunol..

Identification of uterine pacemaker regions at the myometrial–placental interface in the rat

H. A. van den Berg, W. Lammers, E. Lutton, 2018, The Journal of physiology.

Variable-Internal-Stores models of microbial growth and metabolism with dynamic allocation of cellular resources

H. A. van den Berg, O. Nev, 2016, Journal of mathematical biology.

Microbial metabolism and growth under conditions of starvation modelled as the sliding mode of a differential inclusion

H. A. van den Berg, O. Nev, H. A. V. D. Berg, 2018 .

Bacterial Cell Division: Experimental and Theoretical Approaches to the Divisome

H. A. van den Berg, Claire E Broughton, A. Rodger, 2015, Science progress.

The Development of Insulin Resistance in Type 2 Diabetes: Insights from Knockout Studies

H. A. van den Berg, D. Spanswick, Ratchada Pattaranit, 2008, Science progress.

Towards a structural understanding of the smallest known oncoprotein: investigation of the bovine papillomavirus E5 protein using solution-state NMR.

H. A. van den Berg, Joanne Oates, A. M. Dixon, 2011, Biochimica et biophysica acta.

Homeostatic regulation in physiological systems: A versatile Ansatz.

H. A. van den Berg, Y. Kiselev, M. Orlov, 2015, Mathematical biosciences.

The inwardly rectifying K+ channel KIR7.1 controls uterine excitability throughout pregnancy

D. Rand, J. Brosens, M. Taggart, 2014, EMBO molecular medicine.

Mathematical models of energy homeostasis

H. A. van den Berg, Ratchada Pattaranit, Hugo Antonius van den Berg, 2008, Journal of The Royal Society Interface.

Functional and Morphological Development of the Womb Throughout Life

H. A. van den Berg, A. Blanks, A. Shmygol, 2015, Science progress.

Alterations in gap junction connexin43/connexin45 ratio mediate a transition from quiescence to excitation in a mathematical model of the myometrium

Anatoly Shmygol, Shao-Qing Shi, H. A. van den Berg, 2014, Journal of The Royal Society Interface.

Spatial heterogeneity enhances and modulates excitability in a mathematical model of the myometrium

Anatoly Shmygol, Conor McCloskey, H. A. van den Berg, 2013, Journal of The Royal Society Interface.

Different T Cell Receptor Affinity Thresholds and CD8 Coreceptor Dependence Govern Cytotoxic T Lymphocyte Activation and Tetramer Binding Properties*

A. Sewell, J. Boulter, E. Gostick, 2007, Journal of Biological Chemistry.

Occam's Razor: From Ockham's via Moderna to Modern Data Science

H. A. van den Berg, 2018, Science progress.

Peptide length determines the outcome of TCR/peptide-MHCI engagement.

A. Sewell, J. Rossjohn, S. Burrows, 2013, Blood.

Identification of human viral protein-derived ligands recognized by individual MHCI-restricted T-cell receptors

A. Sewell, M. Roederer, John J Miles, 2016, Immunology and cell biology.

Targeted suppression of autoreactive CD8+ T-cell activation using blocking anti-CD8 antibodies

F. Wong, J. Rossjohn, S. Burrows, 2016, Scientific Reports.

CD8 Controls T Cell Cross-Reactivity

A. Sewell, L. Wooldridge, H. A. van den Berg, 2010, The Journal of Immunology.

Antigen presentation on MHC molecules as a diversity filter that enhances immune efficacy.

David A Rand, D. Rand, H. A. van den Berg, 2003, Journal of theoretical biology.

Foreignness as a matter of degree: the relative immunogenicity of peptide/MHC ligands.

David A Rand, D. Rand, H. A. van den Berg, 2004, Journal of theoretical biology.

A reliable and safe T cell repertoire based on low-affinity T cell receptors.

D A Rand, D. Rand, N. Burroughs, 2001, Journal of theoretical biology.

Modulation of T-cell receptor functional sensitivity via the opposing actions of protein tyrosine kinases and phosphatases: a mathematical model.

H. A. van den Berg, Barbara Szomolay, 2014, Integrative biology : quantitative biosciences from nano to macro.

Protein kinase inhibitors substantially improve the physical detection of T-cells with peptide-MHC tetramers

A. Sewell, J. Melenhorst, K. Ladell, 2009, Journal of immunological methods.

Avidity of influenza-specific memory CD8+ T-cell populations decays over time compromising antiviral immunity

K. Ladell, L. Wooldridge, H. A. van den Berg, 2012, European journal of immunology.

CD8+ T-cell specificity is compromised at a defined MHCI/CD8 affinity threshold

S. Burrows, K. Ladell, E. Gostick, 2016, Immunology and cell biology.

Epitope Specificity Delimits the Functional Capabilities of Vaccine-Induced CD8 T Cell Populations

Kylie M. Quinn, D. Douek, D. Ambrozak, 2014, The Journal of Immunology.

Interaction of fast and slow dynamics in endocrine control systems with an application to β-cell dynamics.

H. A. van den Berg, Michael Khan, Yi-Fang Wang, 2012, Mathematical biosciences.

Biological Insights from a Simulation Model of the Critical FtsZ Accumulation Required for Prokaryotic Cell Division.

H. A. van den Berg, A. Rodger, D. Roper, 2015, Biochemistry.

A model of membrane contraction predicting initiation and completion of bacterial cell division.

H. A. van den Berg, A. Rodger, D. Roper, 2013, Integrative biology : quantitative biosciences from nano to macro.

Enhanced immunogenicity of CTL antigens through mutation of the CD8 binding MHC class I invariant region

M. Glick, S. Hutchinson, A. Sewell, 2007, European journal of immunology.

A computational method for three-dimensional reconstruction of the microarchitecture of myometrial smooth muscle from histological sections

Wim J. E. P. Lammers, E. Josiah Lutton, Sean James, 2017, PloS one.

Computational physiology of uterine smooth muscle

H. A. van den Berg, E. Lutton, A. Blanks, 2019, Science progress.

Optimal allocation between nutrient uptake and growth in a microbial trichome

Hugo A. van den Berg, S. Kooijman, H. A. van den Berg, 1998 .

Co-Receptor CD8-Mediated Modulation of T-Cell Receptor Functional Sensitivity and Epitope Recognition Degeneracy

L. Wooldridge, H. A. van den Berg, T. Williams, 2013, Front. Immunol..

Detection of low avidity CD8(+) T cell populations with coreceptor-enhanced peptide-major histocompatibility complex class I tetramers.

D. Douek, P. Chattopadhyay, A. Sewell, 2008, Journal of immunological methods.

The limiting conditional probability distribution in a stochastic model of T cell repertoire maintenance.

Grant Lythe, Carmen Molina-París, H. A. van den Berg, 2010, Mathematical biosciences.

Optimal allocation of building blocks between nutrient uptake systems in a microbe

H. A. van den Berg, Y. Kiselev, M. Orlov, 2002, Journal of mathematical biology.

X Makes Nine: A Distant Ice Giant in the Solar System

H. A. van den Berg, 2016, Science in progress.

Specific T-cell Activation in an Unspecific T-cell Repertoire

Carmen Molina-París, A. Sewell, H. A. van den Berg, 2011, Science progress.

Beyond the Discovery Void: New Targets for Antibacterial Compounds

H. A. van den Berg, Claire E Broughton, A. Rodger, 2016, Science progress.

Quantitative theories of T‐cell responsiveness

D. Rand, H. A. van den Berg, Hugo A. Van Den Berg, 2007, Immunological reviews.

Towards a computational reconstruction of the electrodynamics of premature and full term human labour.

A V Holden, B R Hayes-Gill, O Aslanidi, 2011, Progress in biophysics and molecular biology.

Dual positive and negative regulation of GPCR signaling by GTP hydrolysis.

D. Rand, G. Ladds, Claire Hill, 2009, Cellular signalling.

Mathematical Models of Microbial Growth and Metabolism: A Whole-Organism Perspective

H. A. van den Berg, O. Nev, 2017, Science progress.

Beholding the cosmos: Huygens’ Cosmotheoros and the latter-day Copernicans

H. A. van den Berg, 2019, Science progress.

CD8 coreceptor-mediated focusing can reorder the agonist hierarchy of peptide ligands recognized via the T cell receptor

A. Sewell, K. Ladell, L. Wooldridge, 2020, Proceedings of the National Academy of Sciences.

Peptide length determines the outcome of TCR/peptide-MHCI engagement.

A. Sewell, J. Rossjohn, S. Burrows, 2013, Blood.

Optimal management of nutrient reserves in microorganisms under time-varying environmental conditions.

H. A. van den Berg, O. Nev, Oleg A Nev, 2017, Journal of theoretical biology.

Analysis of Trajectories of a Nonlinear System of Differential Equations

H. A. van den Berg, M. Orlov, Y. Kiselev, 2001 .

Multiple nutrient limitation in unicellulars: reconstructing Liebig's law.

H. A. van den Berg, 1998, Mathematical biosciences.