A. Bentzen

发表

NetTCR: sequence-based prediction of TCR binding to peptide-MHC complexes using convolutional neural networks

M. Nielsen, Bjoern Peters, M. C. Jespersen, 2018, bioRxiv.

Large-scale detection of antigen-specific T cells using peptide-MHC-I multimers labeled with DNA barcodes

Z. Szallasi, A. Eklund, N. McGranahan, 2016, Nature Biotechnology.

Tumor-Infiltrating T Cells From Clear Cell Renal Cell Carcinoma Patients Recognize Neoepitopes Derived From Point and Frameshift Mutations

Z. Szallasi, A. Eklund, M. Donia, 2020, Frontiers in Immunology.

Human endogenous retroviruses form a reservoir of T cell targets in hematological cancers

Z. Szallasi, A. G. Pedersen, A. Eklund, 2020, Nature Communications.

ATRAP - Accurate T cell Receptor Antigen Pairing through data-driven filtering of sequencing information from single-cells

M. Nielsen, L. Jessen, A. Bentzen, 2022, bioRxiv.

Evolution of MHC-based technologies used for detection of antigen-responsive T cells

A. Bentzen, S. Hadrup, 2017, Cancer Immunology, Immunotherapy.

Neoantigen-specific CD8 T cell responses in the peripheral blood following PD-L1 blockade might predict therapy outcome in metastatic urothelial carcinoma

Nana O. Herschend, M. Nielsen, J. Wolchok, 2022, Nature Communications.

Novel technologies for interrogating T cell recognition

Amalie Kai Bentzen, A. Bentzen, 2019 .

NetTCR-2.0 enables accurate prediction of TCR-peptide binding by using paired TCRα and β sequence data

B. Peters, V. Jurtz, L. Jessen, 2021, Communications Biology.

T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide–MHC complexes

Morten Nielsen, Paolo Marcatili, Sine R Hadrup, 2018, Nature Biotechnology.

Neoantigen-reactive CD8+ T cells affect clinical outcome of adoptive cell therapy with tumor-infiltrating lymphocytes in melanoma

Z. Szallasi, M. Donia, I. Svane, 2021, The Journal of clinical investigation.

T-cell-receptor cross-recognition and strategies to select safe T-cell receptors for clinical translation

A. Bentzen, S. Hadrup, 2019, Immuno-oncology technology.

T cell recognition of novel shared breast cancer antigens is frequently observed in peripheral blood of breast cancer patients

I. Svane, A. Bentzen, S. Hadrup, 2019, Oncoimmunology.

CD8+ T cells from patients with narcolepsy and healthy controls recognize hypocretin neuron-specific antigens

H. Ullum, K. Burgdorf, P. Jennum, 2019, Nature Communications.

Next-generation detection of antigen-responsive T cells using DNA barcode-labeled MHC-I 1 multimers

Z. Szallasi, A. Eklund, C. Swanton, 2016 .

Improved T cell receptor antigen pairing through data-driven filtering of sequencing information from single cells

M. Nielsen, L. Jessen, A. Bentzen, 2023, eLife.

TCR-engaging scaffolds selectively expand antigen-specific T-cells with a favorable phenotype for adoptive cell therapy

M. Donia, U. Hansen, A. Bentzen, 2023, Journal for ImmunoTherapy of Cancer.

CD8+ T cells from patients with narcolepsy and healthy controls recognize hypocretin neuron-specific antigens

H. Ullum, K. Burgdorf, P. Jennum, 2019, Nature Communications.

T antigen–specific CD8+ T cells associate with PD-1 blockade response in virus-positive Merkel cell carcinoma

A. Bentzen, S. Hadrup, S. Topalian, 2024, The Journal of clinical investigation.

Simultaneous analysis of pMHC binding and reactivity unveils virus-specific CD8 T cell immunity to a concise epitope set

A. Bentzen, S. Hadrup, Tripti Tamhane, 2023, bioRxiv.

A T cell receptor targeting a recurrent driver mutation in FLT3 mediates elimination of primary human acute myeloid leukemia in vivo

A. Bentzen, T. Yoshizato, M. Griffioen, 2023, Nature Cancer.