N. Mueller

发表

Single-cell RNA-seq denoising using a deep count autoencoder

Fabian J Theis, Gökcen Eraslan, Lukas M Simon, 2019, Nature Communications.

Predicting gene expression in massively parallel reporter assays: A comparative study

Michael Wainberg, Manolis Kellis, Anshul Kundaje, 2017, Human mutation.

Integrative Analysis of MicroRNA and mRNA Data Reveals an Orchestrated Function of MicroRNAs in Skeletal Myocyte Differentiation in Response to TNF-α or IGF1

Fabian J Theis, S. Bauersachs, H. Blum, 2015, PloS one.

N-acyl Taurines and Acylcarnitines Cause an Imbalance in Insulin Synthesis and Secretion Provoking β Cell Dysfunction in Type 2 Diabetes.

Na Sun, Theodore Alexandrov, Jan Krumsiek, 2017, Cell metabolism.

Patchwork organization of the yeast plasma membrane into numerous coexisting domains

N. Mueller, Felix Spira, Gisela Beck, 2012, Nature Cell Biology.

The global gene expression profile of the secondary transition during pancreatic development

Fabian J Theis, N. Mueller, M. Irmler, 2016, Mechanisms of Development.

Model Based Targeting of IL-6-Induced Inflammatory Responses in Cultured Primary Hepatocytes to Improve Application of the JAK Inhibitor Ruxolitinib

Fabian J. Theis, Sebastian Bohl, Ursula Klingmüller, 2017, Front. Physiol..

A modular framework for gene set analysis integrating multilevel omics data

Fabian J. Theis, Fabian J Theis, Florian Buettner, 2013, Nucleic acids research.

Identifying hidden drivers of heterogeneous inflammatory diseases

R. Batra, N. Mueller, T. Biedermann, 2020, bioRxiv.

DeepWAS: Multivariate genotype-phenotype associations by directly integrating regulatory information using deep learning

Fabian J Theis, C. Gieger, M. Waldenberger, 2018 .

MicroRNA-Target Network Inference and Local Network Enrichment Analysis Identify Two microRNA Clusters with Distinct Functions in Head and Neck Squamous Cell Carcinoma

Fabian J Theis, N. Mueller, J. Hess, 2015, International journal of molecular sciences.

miTALOS v2: Analyzing Tissue Specific microRNA Function

Fabian J Theis, Nikola S Mueller, Martin Preusse, 2016, PloS one.

DeepWAS: Multivariate genotype-phenotype associations by directly integrating regulatory information using deep learning

Tim Kacprowski, Till F M Andlauer, Fabian J Theis, 2020, PLoS Comput. Biol..

Exome sequencing of osteosarcoma reveals mutation signatures reminiscent of BRCA deficiency

Florian Engert, Joachim Weischenfeldt, Jan Smida, 2015, Nature Communications.

A novel molecular disease classifier for psoriasis and eczema

Fabian J Theis, J. Ring, N. Mueller, 2016, Experimental dermatology.

Toll‐like receptor 7/8 agonists stimulate plasmacytoid dendritic cells to initiate TH17‐deviated acute contact dermatitis in human subjects

Fabian J Theis, R. Batra, N. Mueller, 2017, The Journal of allergy and clinical immunology.

Type I Immune Response Induces Keratinocyte Necroptosis and Is Associated with Interface Dermatitis.

Fabian J Theis, N. Mueller, T. Biedermann, 2018, The Journal of investigative dermatology.

Single-cell RNA-seq denoising using a deep count autoencoder

Fabian J Theis, L. Simon, Gökçen Eraslan, 2019, Nature Communications.

DeepWAS : Directly integrating regulatory information into GWAS using 1 deep learning supports master regulator MEF 2 C as risk factor for major 2 depressive disorder 3 4

Fabian J. Theis, Fabian J Theis, Gökcen Eraslan, 2016 .

Knowledge guided multi-level network inference

Yue Hu, Christoph Ogris, Janine Arloth, 2020, bioRxiv.

AURKA, DLGAP5, TPX2, KIF11 and CKAP5: Five specific mitosis-associated genes correlate with poor prognosis for non-small cell lung cancer patients

Michael Thomas, Arne Warth, Petros Christopoulos, 2017, International journal of oncology.

Dynamic landscape of pancreatic carcinogenesis reveals early molecular networks of malignancy

Fabian J Theis, H. Friess, J. Kleeff, 2016, Gut.

From mosaic to patchwork: Matching lipids and proteins in membrane organization

N. Mueller, Felix Spira, R. Wedlich-Söldner, 2012, Molecular membrane biology.

Identification of a plasma miRNA biomarker signature for allergic asthma: A translational approach

Fabian J Theis, N. Mueller, F. Alessandrini, 2017, Allergy.

IL‐17C amplifies epithelial inflammation in human psoriasis and atopic eczema

Fabian J Theis, N. Mueller, T. Biedermann, 2019, Journal of the European Academy of Dermatology and Venereology : JEADV.

Phenome-transcriptome correlation unravels anxiety and depression related pathways.

Florian Holsboer, Philipp Gormanns, Nikola S Mueller, 2011, Journal of psychiatric research.

Single-cell RNA-seq denoising using a deep count autoencoder

Fabian J. Theis, Fabian J Theis, Lukas M. Simon, 2018, Nature Communications.

An Investigation of Psychosis Subgroups With Prognostic Validation and Exploration of Genetic Underpinnings: The PsyCourse Study.

Till F. M. Andlauer, M. Rietschel, M. Nöthen, 2020, JAMA psychiatry.

A computational model to predict severity of atopic eczema from 30 serum proteins.

Fabian J Theis, N. Mueller, C. Schmidt‐Weber, 2016, The Journal of allergy and clinical immunology.

DeepWAS: Multivariate genotype-phenotype associations by directly integrating regulatory information using deep learning

Fabian J Theis, E. Binder, Gökçen Eraslan, 2016, bioRxiv.

QuantiSpec--Quantitative mass spectrometry data analysis of (15)N-metabolically labeled proteins.

C. Turck, N. Mueller, M. Filiou, 2009, Journal of proteomics.

Copy number aberrations from Affymetrix SNP 6.0 genotyping data - how accurate are commonly used prediction approaches?

Fabian J Theis, Ivan Kondofersky, Nikola S Mueller, 2018, Briefings Bioinform..

A modular framework for gene set analysis integrating multilevel omics data

Fabian J Theis, F. Buettner, N. Mueller, 2013, Nucleic acids research.

Gaussian graphical modeling reveals specific lipid correlations in glioblastoma cells

Anke Meyer-Bäse, Fabian J. Theis, Fabian J Theis, 2011, Defense + Commercial Sensing.