D. Bastia

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Crystal structure of the replication terminator protein from B. subtiiis at 2.6 Å

D. Bussiere, D. Bastia, W. White, 1995, Cell.

The Intra-S Phase Checkpoint Protein Tof1 Collaborates with the Helicase Rrm3 and the F-box Protein Dia2 to Maintain Genome Stability in Saccharomyces cerevisiae*

D. Bastia, R. Stamenova, M. Curcio, 2010, The Journal of Biological Chemistry.

Contrasting Roles of Checkpoint Proteins as Recombination Modulators at Fob1-Ter Complexes with or without Fork Arrest

D. Bastia, N. Bairwa, B. Mohanty, 2009, Eukaryotic Cell.

Contrasting Roles of Checkpoint Proteins as Recombination Modulators at Fob1-Ter Complexes with or without Fork Arrest

D. Bastia, N. Bairwa, B. Mohanty, 2009 .

Cooperativity at a distance promoted by the combined action of two replication initiator proteins and a DNA bending protein at the replication origin of pSC101.

D. Bastia, T. Stenzel, T. MacAllister, 1991, Genes & development.

Phosphorylation of CMG helicase and Tof1 is required for programmed fork arrest

M. O’Donnell, D. Bastia, L. Langston, 2016, Proceedings of the National Academy of Sciences.

A replication initiator protein enhances the rate of hybrid formation between a silencer RNA and an activator RNA

D. Bastia, I. Patel, 1987, Cell.

Mechanistic Insights into Replication Termination as Revealed by Investigations of the Reb1-Ter3 Complex of Schizosaccharomyces pombe

D. Bastia, Subhrajit Biswas, 2008, Molecular and Cellular Biology.

Use of gene fusions and protein-protein interaction in the isolation of a biologically active regulatory protein: the replication initiator protein of plasmid R6K.

T. Vanaman, D. Bastia, H. Charbonneau, 1983, Proceedings of the National Academy of Sciences of the United States of America.

Mechanism of recruitment of DnaB helicase to the replication origin of the plasmid pSC101.

D. Bastia, H. J. Datta, G. Khatri, 1999, Proceedings of the National Academy of Sciences of the United States of America.

The replication initiator protein of plasmid pSC101 is a transcriptional repressor of its own cistron.

C. Vocke, D. Bastia, 1985, Proceedings of the National Academy of Sciences of the United States of America.

Replication initiator protein of plasmid R6K autoregulates its own synthesis at the transcriptional step.

D. Bastia, W. Kelley, 1985, Proceedings of the National Academy of Sciences of the United States of America.

The DnaK-DnaJ-GrpE Chaperone System Activates Inert Wild Type π Initiator Protein of R6K into a Form Active in Replication Initiation*

D. Bastia, J. Reddy, S. Zzaman, 2004, Journal of Biological Chemistry.

Primary structure of the essential replicon of the plasmid pSC101.

C. Vocke, D. Bastia, 1983, Proceedings of the National Academy of Sciences of the United States of America.

DNA bending is induced in an enhancer by the DNA-binding domain of the bovine papillomavirus E2 protein.

C. Moskaluk, D. Bastia, 1988, Proceedings of the National Academy of Sciences of the United States of America.

The E2 "gene" of bovine papillomavirus encodes an enhancer-binding protein.

C. Moskaluk, D. Bastia, 1987, Proceedings of the National Academy of Sciences of the United States of America.

The replication initiator protein is of the plasmid R 6 K specifically interacts with the host-encoded helicase DnaB ( initiation of replication / protein-protein interaction )

D. Bastia, B. Mohanty, M. Lobert, 2005 .

Replication Fork Arrest and rDNA Silencing Are Two Independent and Separable Functions of the Replication Terminator Protein Fob1 of Saccharomyces cerevisiae*

D. Bastia, N. Bairwa, B. Mohanty, 2010, The Journal of Biological Chemistry.

swi1- and swi3-dependent and independent replication fork arrest at the ribosomal DNA of Schizosaccharomyces pombe.

D. Bastia, G. Krings, 2004, Proceedings of the National Academy of Sciences of the United States of America.

DNA.and analysis of its contact points with enhancer: purification of the DNA-binding E2 transcriptional control protein with the viral Interaction of the bovine papillomavirus type 1

C. Moskaluk, D. Bastia, 2014 .

DnaA protein is required for replication of the minimal replicon of the broad-host-range plasmid RK2 in Escherichia coli

D. Bastia, N. Turjman, P. J. Gaylo, 1987, Journal of bacteriology.

Mechanistic Insights into Replication Termination as Revealed by Investigations of the Reb1- Ter3 Complex of Schizosaccharomyces pombe (cid:1) †

D. Bastia, S. Biswas, 2008 .

Studies on the late replication of phage lambda: rolling-circle replication of the wild type and a partially suppressed strain, Oam29 Pam80.

N. Sueoka, D. Bastia, 1975, Journal of molecular biology.

Primary structure of the replication initiation protein of plasmid R6K.

D. Bastia, J. Germino, 1982, Proceedings of the National Academy of Sciences of the United States of America.

Sap1p Binds to Ter1 at the Ribosomal DNA of Schizosaccharomyces pombe and Causes Polar Replication Fork Arrest*

D. Bastia, G. Krings, 2005, Journal of Biological Chemistry.

Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe

D. Bastia, V. Santosh, C. Escalante, 2016, Proceedings of the National Academy of Sciences.

The DNA-binding domain of HPV-16 E2 protein interaction with the viral enhancer: protein-induced DNA bending and role of the nonconserved core sequence in binding site affinity.

D. Bastia, C. L. Bedrosian, 1990, Virology.

Replication termination mechanism as revealed by Tus-mediated polar arrest of a sliding helicase

D. Bastia, G. Krings, M. Greenberg, 2008, Proceedings of the National Academy of Sciences.

A replication origin is turned off by an origin-“silencer” sequence

D. Bastia, I. Patel, 1986, Cell.

Direct physical interaction between DnaG primase and DnaB helicase of Escherichia coli is necessary for optimal synthesis of primer RNA.

D. Bastia, Y. Lu, B. Mohanty, 1996, Proceedings of the National Academy of Sciences of the United States of America.

Determination of restriction sites and the nucleotide sequence surrounding the relaxation site of ColE1.

D. Bastia, 1978, Journal of molecular biology.

DNA-protein interaction at the origin of DNA replication of the plasmid pSC101

C. Vocke, D. Bastia, 1983, Cell.

Regulation of Replication Termination by Reb1 Protein-Mediated Action at a Distance

S. Forsburg, D. Bastia, S. Sabatinos, 2010, Cell.

Ultrastructure of interphase chromosomes.

D. Bastia, M. Swaminathan, 1967, Experimental cell research.

Investigations of π Initiator Protein-mediated Interaction between Replication Origins α and γ of the Plasmid R6K*

D. Bastia, S. Singh, S. Zzaman, 2009, The Journal of Biological Chemistry.

Replication Initiation at a Distance

D. Bastia, M. Abhyankar, M. Saxena, 2009, The Journal of Biological Chemistry.

Reconstitution of F Factor DNA Replication in Vitro with Purified Proteins*

D. Bastia, M. Abhyankar, S. Zzaman, 2004, Journal of Biological Chemistry.

Molecular Architecture of a Eukaryotic DNA Replication Terminus-Terminator ProteinComplex

D. Bastia, G. Krings, 2006, Molecular and Cellular Biology.

The integration host factor of Escherichia coli binds to bent DNA at the origin of replication of the plasmid pSC101

D. Bastia, T. Stenzel, P. Patel, 1987, Cell.

Interaction of the plasmid R6K-encoded replication initiator protein with its binding sites on DNA

D. Bastia, J. Germino, 1983, Cell.

Biological Sciences: Non-specific ‘pairing’ of DNA molecules by recombination enzyme of Bacillus subtilis

N. Sueoka, D. Bastia, S. Ohi, 1974, Nature.

The Tof1p-Csm3p protein complex counteracts the Rrm3p helicase to control replication termination of Saccharomyces cerevisiae.

D. Bastia, N. Bairwa, B. Mohanty, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Mechanism of Regulation of Intrachromatid Recombination and Long-Range Chromosome Interactions in Saccharomyces cerevisiae

Sean J. Humphrey, D. Bastia, S. Jazwinski, 2016, Molecular and Cellular Biology.

Mechanism of regulation of ‘chromosome kissing’ induced by Fob1 and its physiological significance

D. Bastia, S. Jazwinski, J. Jiang, 2015, Genes & development.

Mechanism and physiological significance of programmed replication termination.

D. Bastia, Shamsuz Zaman, 2014, Seminars in cell & developmental biology.

Site-Directed Mutagenesis and Yeast Reverse 2-Hybrid-Guided Selections to Investigate the Mechanism of Replication Termination

D. Bastia, B. Mohanty, S. Zzaman, 2013 .

Mechanisms of polar arrest of a replication fork

D. Bastia, D. Kaplan, 2009, Molecular microbiology.

Binding of the Replication Terminator Protein Fob1p to the Ter Sites of Yeast Causes Polar Fork Arrest*

D. Bastia, B. Mohanty, 2004, Journal of Biological Chemistry.

Mechanism of termination of DNA replication of Escherichia coli involves helicase–contrahelicase interaction

Shamsuzzaman, D. Bastia, S. Mulugu, 2001, Proceedings of the National Academy of Sciences of the United States of America.

Mechanistic Studies on the Impact of Transcription on Sequence-specific Termination of DNA Replication and Vice Versa*

D. Bastia, B. Mohanty, T. Sahoo, 1998, The Journal of Biological Chemistry.

Helicase–Contrahelicase Interaction and the Mechanism of Termination of DNA Replication

D. Bussiere, D. Bastia, S. White, 1996, Cell.

The replication terminator protein of the gram-positive bacterium Bacillus subtilis functions as a polar contrahelicase in gram-negative Escherichia coli.

D. Bastia, S. Khan, B. Mohanty, 1994, Proceedings of the National Academy of Sciences of the United States of America.

The replication terminator protein of E. coli is a DNA sequence-specific contra-helicase

D. Bastia, G. Khatri, P. Sista, 1989, Cell.

Biochemical mechanisms of initiation and termination of plasmid DNA replication

D. Bastia, 2005 .

Termination of DNA replication in prokaryotic chromosomes.

D. Bastia, A. Manna, T. Sahoo, 1997, Genetic engineering.

The structure and function of the replication terminator protein of Bacillus subtilis: identification of the ‘winged helix’ DNA‐binding domain.

C. Hutchison, D. Bussiere, D. Bastia, 1996, The EMBO journal.

Mechanisms for Rep1 icat ion Completing DNA

D. Bastia, B. Mohanty, 1996 .

The Contrahelicase Activities of the Replication Terminator Proteins of Escherichia coli and Bacillus subtilis Are Helicase-specific and Impede both Helicase Translocation and Authentic DNA Unwinding (*)

D. Bastia, A. Manna, B. Mohanty, 1995, The Journal of Biological Chemistry.

A 27 kd protein of E. coli promotes antitermination of replication in vitro at a sequence-specific replication terminus

D. Bastia, A. Miron, S. Kaul, 1993, Cell.

Replication terminator protein of Escherichia coli is a transcriptional repressor of its own synthesis.

D. Bastia, W. Kelley, S. Natarajan, 1991, Proceedings of the National Academy of Sciences of the United States of America.

DNA-protein interaction at the replication termini of plasmid R6K.

C. A. Hutchinson, D. Bastia, P. Sista, 1991, Genes & development.

'winged helix' DNA-binding domain

C. Hutchison, D. Bussiere, D. Bastia, 2022 .

Activation of distant replication origins in vivo by DNA looping as revealed by a novel mutant form of an initiator protein defective in cooperativity at a distance.

D. Bastia, A. Miron, S. Mukherjee, 1992, The EMBO journal.

A Replication Terminus Located at or Near a Replication Checkpoint of Bacillus subtilis Functions Independently of Stringent Control*

D. Bastia, A. Gautam, 2001, The Journal of Biological Chemistry.

The dimer-dimer interaction surface of the replication terminator protein of Bacillus subtilis and termination of DNA replication.

D. Bussiere, D. Bastia, S. White, 1996, Proceedings of the National Academy of Sciences of the United States of America.

Termination of DNA replication in vitro: requirement for stereospecific interaction between two dimers of the replication terminator protein of Bacillus subtilis and with the terminator site to elicit polar contrahelicase and fork impedance.

D. Bastia, B. K. Mohanty, B. Mohanty, 1995, The EMBO journal.

A host-encoded DNA-binding protein promotes termination of plasmid replication at a sequence-specific replication terminus.

D. Bastia, S. Mukherjee, P. Patel, 1989, Proceedings of the National Academy of Sciences of the United States of America.

Crystallization and preliminary structural analysis of the replication terminator protein of Bacillus subtilis.

D. Bussiere, D. Bastia, S. White, 1992, The Journal of biological chemistry.

The nucleotide sequence surrounding the replication terminus of R6K.

D. Bastia, J. H. Crosa, J. Germino, 1981, Proceedings of the National Academy of Sciences of the United States of America.

Structural and Functional Analysis of a Bipolar Replication Terminus IMPLICATIONS FOR THE ORIGIN OF POLARITY OF FORK ARREST*

S. Bron, D. Bussiere, D. Bastia, 2001 .

The relationship between sequence‐specific termination of DNA replication and transcription.

D. Bastia, B. K. Mohanty, T. Sahoo, 1996, The EMBO journal.

Escherichia coli replication terminator protein impedes simian virus 40 (SV40) DNA replication fork movement and SV40 large tumor antigen helicase activity in vitro at a prokaryotic terminus sequence.

D. Bastia, C. L. Bedrosian, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Sequence-specific and polarized replication termination in vitro: complementation of extracts of tus- Escherichia coli by purified Ter protein and analysis of termination intermediates.

D. Bastia, G. Khatri, T. MacAllister, 1990, Proceedings of the National Academy of Sciences of the United States of America.

Molecular cloning of the replication terminus of the plasmid R6K.

D. Bastia, J. H. Crosa, J. Germino, 1981, Gene.

Termination of DNA replication in vitro at a sequence-specific replication terminus

D. Bastia, J. Germino, 1981, Cell.

Reconstitution of R6K DNA Replication in Vitro Using 22 Purified Proteins*

D. Bastia, M. Abhyankar, S. Zzaman, 2003, Journal of Biological Chemistry.

Mechanistic aspects of DnaA–RepA interaction as revealed by yeast forward and reverse two‐hybrid analysis

D. Bastia, Rahul Sharma, A. Kachroo, 2001, The EMBO journal.

Enhancer-origin interaction in plasmid R6K involves a DNA loop mediated by initiator protein

Sunil Mukherjee, H. Erickson, D. Bastia, 1988, Cell.

Conformational changes in a replication origin induced by an initiator protein

D. Bastia, S. Mukherjee, I. Patel, 1985, Cell.

Interaction of the bovine papillomavirus type 1 E2 transcriptional control protein with the viral enhancer: purification of the DNA-binding domain and analysis of its contact points with DNA

C. Moskaluk, D. Bastia, Christopher A. Moskaluk, 1988, Journal of virology.

Rapid purification of a cloned gene product by genetic fusion and site-specific proteolysis.

D. Bastia, J. Germino, 1984, Proceedings of the National Academy of Sciences of the United States of America.

The replication initiator protein of plasmid R6K tagged with β-galactosidase shows sequence-specific DNA-binding

D. Bastia, J. Germino, 1983, Cell.

The nucleotide sequence of the replication origin beta of the plasmid R6K.

D. Bastia, J. Germino, M. Shon, 1982, The Journal of biological chemistry.

Crystal structure of π initiator protein–iteron complex of plasmid R6K: Implications for initiation of plasmid DNA replication

D. Bastia, C. Davies, M. K. Swan, 2006, Proceedings of the National Academy of Sciences.

Oligomeric initiator protein-mediated DNA looping negatively regulates plasmid replication in vitro by preventing origin melting.

D. Bastia, S. Zzaman, 2005, Molecular cell.

Biochemical Investigations of Control of Replication Initiation of Plasmid R6K*

D. Bastia, J. Reddy, Rahul Sharma, 2004, Journal of Biological Chemistry.

New Approaches to the Expression and Isolation of a Regulatory Protein

T. Vanaman, D. Bastia, J. Germino, 1986 .

DNA-protein interaction at the replication origins of plasmid chromosomes.

C. Vocke, D. Bastia, J. Gray, 1985, Basic life sciences.

The bovine papillomavirus type 1 transcriptional activator E2 protein binds to its DNA recognition sequence as a dimer.

C. Moskaluk, D. Bastia, 1989, Virology.

“Chromosome kissing” and modulation of replication termination

D. Bastia, S. Singh, 2011, Bioarchitecture.

Heterogeneity, complexity, and repetition of the chloroplast DNA of Chlamydomonas reinhardtii.

D. Bastia, H. Swift, K. Chiang, 1971, Proceedings of the National Academy of Sciences of the United States of America.

Multiple pathways of copy control of gamma replicon of R6K: mechanisms both dependent on and independent of cooperativity of interaction of tau protein with DNA affect the copy number.

D. Bastia, A. Miron, I. Patel, 1994, Proceedings of the National Academy of Sciences of the United States of America.

Structural and functional analysis of a replication enhancer: separation of the enhancer activity from origin function by mutational dissection of the replication origin gamma of plasmid R6K.

D. Bastia, W. Kelley, I. Patel, 1992, Proceedings of the National Academy of Sciences of the United States of America.

Conformational changes induced by integration host factor at origin gamma of R6K and copy number control.

D. Bastia, W. Kelley, 1991, The Journal of biological chemistry.

Replication of plasmid R6K origin gamma in vitro. Dependence on dual initiator proteins and inhibition by transcription.

D. Bastia, A. Miron, W. Kelley, 1991, The Journal of biological chemistry.

Detection of DNA looping due to simultaneous interaction of a DNA-binding protein with two spatially separated binding sites on DNA.

H. Erickson, D. Bastia, S. Mukherjee, 1988, Proceedings of the National Academy of Sciences of the United States of America.

The nucleotide sequence surrounding the origin of DNA replication of Col E1.

D. Bastia, 1977, Nucleic acids research.

A spectroscopic and electron microscopic examination of the highly condensed DNA structures formed by denaturation in Mg(ClO4)2.

D. Bastia, W. Bauer, G. S. Ott, 1978, Biochimica et biophysica acta.

6 Mechanisms for Completing DNA Replication

D. Bastia, B. Mohanty, 1996 .

The replication initiator protein pi of the plasmid R6K specifically interacts with the host-encoded helicase DnaB.

D. Bastia, B. Mohanty, M. Lobert, 1996, Proceedings of the National Academy of Sciences of the United States of America.

Crystallization and preliminary X-ray characterization of the eukaryotic replication terminator Reb1-Ter DNA complex.

Rahul Jaiswal, D. Bastia, C. Escalante, 2015, Acta crystallographica. Section F, Structural biology communications.

The E 2 " gene " of bovine papillomavirus encodes an enhancer-binding protein ( transcriptional control / recombinant DNA / DNA-protein interaction )

C. Moskaluk, D. Bastia, 2022 .

Mechanistic studies of initiator–initiator interaction and replication initiation

D. Bastia, H. J. Datta, Ya‐Bin Lu, 1998, The EMBO journal.

Activation in vivo of the minimal replication origin beta of plasmid R6K requires a small target sequence essential for DNA looping.

D. Bastia, W. Kelley, 1992, The New biologist.

Nucleotide sequence determination of a strong promoter of the colicin E 1 plasmid. Analysis of restriction sites protected by RNA polymerase interactions before and after limited transcription.

D. Bastia, J. Lebowitz, P. Chan, 1979, Nucleic acids research.

Termination of DNA replication of bacterial and plasmid chromosomes

D. Bussiere, D. Bastia, Deepak Bastia, 1999, Molecular microbiology.

Phosphorylation of CMG helicase and Tof1 is required for programmed fork arrest

M. O’Donnell, D. Bastia, P. Pasero, 2016, Proceedings of the National Academy of Sciences.

Structural aspects of protein-DNA interactions as revealed by conversion of the interacting protein into a sequence-specific cross-linking agent or a chemical nuclease.

D. Bastia, 1996, Structure.