Chenyu Zhu

发表

DeepCRISPR: optimized CRISPR guide RNA design by deep learning

Guohui Chuai, Hanhui Ma, Jifang Yan, 2018, Genome Biology.

MetaTopics: an integration tool to analyze microbial community profile by topic model

Chenyu Zhu, Guohui Chuai, Jifang Yan, 2017, BMC Genomics.

Toward in silico Identification of Tumor Neoantigens in Immunotherapy.

Chi Zhou, Chenyu Zhu, Qi Liu, 2019, Trends in molecular medicine.

Deciphering relationship between microhomology and in-frame mutation occurrence in human CRISPR-based gene knockout.

Guohui Chuai, Jifang Yan, Chi Zhou, 2016, Molecular therapy. Nucleic acids.

iDMer: an integrative and mechanism-driven response system for identifying compound interventions for sudden virus outbreak

Chenyu Zhu, Qi Liu, Yukang Gong, 2020, Briefings Bioinform..

Privacy-preserving integration of multiple institutional data for single-cell type identification with scPrivacy

Chenyu Zhu, Bin Duan, Qi Liu, 2022, bioRxiv.

Privacy-preserving integration of multiple institutional data for single-cell type identification with scPrivacy

Chenyu Zhu, Bin Duan, Qi Liu, 2022, bioRxiv.

A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data

Guohui Chuai, Chenyu Zhu, Bin Duan, 2022, Genome Biology.

Learning for single-cell assignment

Chen Tang, Bin Duan, Chenyu Zhu, 2020, Science Advances.

pTuneos: prioritizing tumor neoantigens from next-generation sequencing data

Guohui Chuai, Chi Zhou, Chenyu Zhu, 2019, Genome Medicine.

DrSim: Similarity Learning for Transcriptional Phenotypic Drug Discovery

Chenyu Zhu, Bin Duan, Qi Liu, 2021, bioRxiv.

Integrating multiple references for single-cell assignment

Chenyu Zhu, Bin Duan, Qi Liu, 2021, Nucleic acids research.

Deciphering relationship between microhomology and in-frame mutation occurrence in human CRISPR-based gene knockout

Qin Ma, Chenyu Zhu, Guohui Chuai, 2016, Molecular therapy. Nucleic acids.

MetaTopics: an integration tool to analyze microbial community profile by topic model

Guohui Chuai, Jifang Yan, Chi Zhou, 2017, BMC Genomics.

pTuneos: prioritizing tumor neoantigens from next-generation sequencing data

Guohui Chuai, Chi Zhou, Chenyu Zhu, 2019, Genome Medicine.

DeepCRISPR: optimized CRISPR guide RNA design by deep learning

Guohui Chuai, Hanhui Ma, Jifang Yan, 2018, Genome Biology.

A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data

Guohui Chuai, Chenyu Zhu, Bin Duan, 2022, Genome Biology.

Systematic exploration of optimized base editing gRNA design and pleiotropic effects with BExplorer.

Guohui Chuai, Jifang Yan, Dongyu Xue, 2022, Genomics, proteomics & bioinformatics.

Personalized tumor combination therapy optimization using the single-cell transcriptome

Guohui Chuai, Chenyu Zhu, Bin Duan, 2023, Genome Medicine.