T. Dunkley

发表

i-Tracker: For quantitative proteomics using iTRAQ™

C. Bessant, I. Shadforth, T. Dunkley, 2005, BMC Genomics.

Growth control of the eukaryote cell: a systems biology study in yeast

D. Hoyle, N. Paton, D. Kell, 2007, Journal of biology.

Improved sub‐cellular resolution via simultaneous analysis of organelle proteomics data across varied experimental conditions

M. Trotter, T. Dunkley, K. Lilley, 2010, Proteomics.

Confident protein identification using the average peptide score method coupled with search-specific, ab initio thresholds.

C. Bessant, I. Shadforth, T. Dunkley, 2005, Rapid communications in mass spectrometry : RCM.

Mapping the Arabidopsis organelle proteome.

Rod B. Watson, C. Bessant, J. Griffin, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Putative Glycosyltransferases and Other Plant Golgi Apparatus Proteins Are Revealed by LOPIT Proteomics1[W]

S. Munro, T. Stevens, T. Dunkley, 2012, Plant Physiology.

Characterization of a human pluripotent stem cell‐derived model of neuronal development using multiplexed targeted proteomics

Meghan T. Miller, R. Jagasia, P. Cutler, 2015, Proteomics. Clinical applications.

HtrA1 Mediated Intracellular Effects on Tubulin Using a Polarized RPE Disease Model

Álvaro Cortés Cabrera, O. Schilling, T. Dunkley, 2017, EBioMedicine.

Quantitative ADME Proteomics – CYP and UGT Enzymes in the Beagle Dog Liver and Intestine

Ruedi Aebersold, Tom Dunkley, Aleksandra Galetin, 2014, Pharmaceutical Research.

Determination of genuine residents of plant endomembrane organelles using isotope tagging and multivariate statistics.

T. Dunkley, K. Lilley, 2008, Methods in molecular biology.

Targeted profiling of polar intracellular metabolites using ion-pair-high performance liquid chromatography and -ultra high performance liquid chromatography coupled to tandem mass spectrometry: applications to serum, urine and tissue extracts.

I. Wilson, T. Dunkley, G. Theodoridis, 2014, Journal of chromatography. A.

AZD3514: A Small Molecule That Modulates Androgen Receptor Signaling and Function In Vitro and In Vivo

Rhys D O Jones, A. Rabow, S. Barry, 2013, Molecular Cancer Therapeutics.

Small Molecule Therapeutics AZD 3514 : A Small Molecule That Modulates Androgen Receptor Signaling and Function In Vitro and In Vivo

Rhys D O Jones, A. Rabow, S. Barry, 2013 .

mTORC1 Inhibition Corrects Neurodevelopmental and Synaptic Alterations in a Human Stem Cell Model of Tuberous Sclerosis.

Anirvan Ghosh, Tom Dunkley, Sannah Zoffmann, 2016, Cell reports.

MSstatsTMT: Statistical Detection of Differentially Abundant Proteins in Experiments with Isobaric Labeling and Multiple Mixtures

Olga Vitek, Meena Choi, Balazs Banfai, 2020, Molecular & Cellular Proteomics.

TMT-MS3-Enabled Proteomic Quantification of Human IPSC-Derived Neurons

R. Jagasia, T. Dunkley, M. Tzouros, 2019, Neuromethods.

Localization of Organelle Proteins by Isotope Tagging (LOPIT)*S

J. Griffin, J. Griffin, T. Dunkley, 2004, Molecular & Cellular Proteomics.

Quantitative proteomic approach to study subcellular localization of membrane proteins

Conrad Bessant, Kathryn S Lilley, Julian L Griffin, 2006, Nature Protocols.

A systematic approach to modeling, capturing, and disseminating proteomics experimental data

Chris F. Taylor, Norman W. Paton, Douglas B. Kell, 2003, Nature Biotechnology.

Identification of DYRK1B as a substrate of ERK1/2 and characterisation of the kinase activity of DYRK1B mutants from cancer and metabolic syndrome

S. Cook, Mark Cockerill, T. Dunkley, 2015, Cellular and Molecular Life Sciences.

N-Terminomics identifies HtrA1 cleavage of thrombospondin-1 with generation of a proangiogenic fragment in the polarized retinal pigment epithelial cell model of age-related macular degeneration.

O. Schilling, T. Dunkley, S. Fauser, 2018, Matrix biology : journal of the International Society for Matrix Biology.

Secreted retrovirus-like GAG-domain-containing protein PEG10 is regulated by UBE3A and is involved in Angelman syndrome pathophysiology

R. Jagasia, B. Bánfai, T. Dunkley, 2021, Cell reports. Medicine.

Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments*

Brendan MacLean, Olga Vitek, Meena Choi, 2020, Molecular & Cellular Proteomics.

MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets

Yasset Perez-Riverol, Alexey I Nesvizhskii, Guo Ci Teo, 2020, Nature Methods.

The use of isotope-coded affinity tags (ICAT) to study organelle proteomes in Arabidopsis thaliana.

Rod B. Watson, T. Dunkley, K. Lilley, 2004, Biochemical Society transactions.

Selection of Features with Consistent Profiles Improves Relative Protein Quantification in Mass Spectrometry Experiments.

B. MacLean, O. Vitek, B. Bánfai, 2020, Molecular & cellular proteomics : MCP.

HtrA1 activation is driven by an allosteric mechanism of inter-monomer communication

Álvaro Cortés Cabrera, B. Bánfai, P. Petrone, 2017, bioRxiv.

Quantitative ADME Proteomics – CYP and UGT Enzymes in the Beagle Dog Liver and Intestine

R. Aebersold, P. Cutler, A. Galetin, 2014, Pharmaceutical Research.

Identification of DYRK1B as a substrate of ERK1/2 and characterisation of the kinase activity of DYRK1B mutants from cancer and metabolic syndrome

S. Cook, Mark Cockerill, T. Dunkley, 2015, Cellular and Molecular Life Sciences.

HtrA1 activation is driven by an allosteric mechanism of inter-monomer communication

B. Bánfai, P. Petrone, O. Schilling, 2017, Scientific Reports.