Š. Janeček

发表

Characterization of Maltase Clusters in the Genus Drosophila

Marek Gabriško, Š. Janeček, 2010, Journal of Molecular Evolution.

Association of Novel Domain in Active Site of Archaic Hyperthermophilic Maltogenic Amylase from Staphylothermus marinus*

B. Oh, Š. Janeček, T. Jung, 2012, The Journal of Biological Chemistry.

Looking for the ancestry of the heavy‐chain subunits of heteromeric amino acid transporters rBAT and 4F2hc within the GH13 α‐amylase family

Marek Gabriško, Š. Janeček, 2009, The FEBS journal.

Any order imaginary time propagation method for solving the Schrödinger equation

Š. Janeček, S. Chin, E. Krotscheck, 2008, 0809.3739.

Strategies for obtaining stable enzymes

Š. Janeček, 1993 .

The carbohydrate‐binding module family 20 – diversity, structure, and function

Birte Svensson, Š. Janeček, B. Svensson, 2009, The FEBS journal.

A new GH13 subfamily represented by the α-amylase from the halophilic archaeon Haloarcula hispanica

Š. Janeček, Barbora Zámocká, 2019, Extremophiles.

Domain evolution in enzymes of the neopullulanase subfamily.

Š. Janeček, Andrea Kuchtová, 2016, Microbiology.

Characterization and diversity of the complete set of GH family 3 enzymes from Rhodothermus marinus DSM 4253

Marek Gabriško, Š. Janeček, Javier A. Linares-Pastén, 2020, Scientific Reports.

Extension of the taxonomic coverage of the family GH126 outside Firmicutes and in silico characterization of its non-catalytic terminal domains

Š. Janeček, Lenka Kerényiová, 2020, 3 Biotech.

Raw starch–degrading α‐amylase from Bacillus aquimaris MKSC 6.2: isolation and expression of the gene, bioinformatics and biochemical characterization of the recombinant enzyme

A. S. Noer, L. Dijkhuizen, Š. Janeček, 2013, Journal of applied microbiology.

How many α-amylase GH families are there in the CAZy database?

Š. Janeček, B. Svensson, 2022, Amylase.

In silico analysis of the α-amylase family GH57: eventual subfamilies reflecting enzyme specificities

Š. Janeček, Mária Martinovičová, 2018, 3 Biotech.

Bioinformatics of the glycoside hydrolase family 57 and identification of catalytic residues in amylopullulanase from Thermococcus hydrothermalis.

Š. Janeček, M. O’Donohue, Richard Zona, 2004, European journal of biochemistry.

Close Evolutionary Relatedness of α-Amylases from Archaea and Plants

Š. Janeček, B. Haye, A. Belarbi, 1999, Journal of Molecular Evolution.

Amylolytic enzymes - focus on the alpha-amylases from Archae and plants

Š. Janeček, 2021, Nova Biotechnologica et Chimica.

Fungal Hybrid B heme peroxidases – unique fusions of a heme peroxidase domain with a carbohydrate-binding domain

C. Obinger, Š. Janeček, M. Zámocký, 2017, Scientific Reports.

Morphological, physiological, molecular and phylogenetic characterization of new environmental isolates of Acanthamoeba spp. from the region of Bratislava, Slovakia

Š. Janeček, J. Timko, A. Nagy, 2010, Biologia.

α‐Amylases and approaches leading to their enhanced stability

S. Balaz, Š. Janeček, 1992, FEBS letters.

Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes.

Spencer J. Williams, T. Pons, R. Pickersgill, 2018, Glycobiology.

Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial α-amylase gene to Basidiomycetes

Š. Janeček, D. Casane, M. Binder, 2013, BMC Evolutionary Biology.

Proteins without Enzymatic Function with Sequence Relatedness to the α-Amylase Family

Š. Janeček, 光司大段, 2000 .

In silico analysis of family GH77 with focus on amylomaltases from borreliae and disproportionating enzymes DPE2 from plants and bacteria.

Š. Janeček, Andrea Kuchtová, 2015, Biochimica et biophysica acta.

Common phylogeny of catalase-peroxidases and ascorbate peroxidases.

Š. Janeček, M. Zámocký, F. Koller, 2000, Gene.

The Ruminococcus bromii amylosome protein Sas6 binds single and double helical α-glucan structures in starch

C. V. Vander Kooi, Z. Wawrzak, Š. Janeček, 2022, bioRxiv.

Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family

Marek Gabriško, Š. Janeček, 2016, Cellular and Molecular Life Sciences.

A Novel Subfamily GH13_46 of the α-Amylase Family GH13 Represented by the Cyclomaltodextrinase from Flavobacterium sp. No. 92

Š. Janeček, Filip Mareček, 2022, Molecules.

Relationship of sequence and structure to specificity in the α-amylase family of enzymes

Š. Janeček, B. Svensson, E. Macgregor, 2001 .

Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57

Š. Janeček, Karol Blesák, 2012, Extremophiles.

Thermophilic archaeal amylolytic enzymes

Š. Janeček, B. Haye, A. Belarbi, 2000 .

Tracing the evolution of the α-amylase subfamily GH13_36 covering the amylolytic enzymes intermediate between oligo-1,6-glucosidases and neopullulanases.

Š. Janeček, Katarína Majzlová, Zuzana Pukajová, 2013, Carbohydrate research.

Oligo-1,6-glucosidase and neopullulanase enzyme subfamilies from the α-amylase family defined by the fifth conserved sequence region

Š. Janeček, A. Oslancová, 2002, Cellular and Molecular Life Sciences CMLS.

alpha-Amylase family: molecular biology and evolution.

Š. Janeček, Štefan Janeček, 1997, Progress in biophysics and molecular biology.

Close evolutionary relatedness among functionally distantly related members of the (α/β)8‐barrel glycosyl hydrolases suggested by the similarity of their fifth conserved sequence region

Š. Janeček, 1995, FEBS letters.

Pectin degrading glycoside hydrolases of family 28: sequence-structural features, specificities and evolution.

Š. Janeček, O. Markovič, 2001, Protein engineering.

Domain Evolution in the α-Amylase Family

B. Henrissat, Š. Janeček, B. Svensson, 1997, Journal of Molecular Evolution.

A putative novel starch-binding domain revealed by in silico analysis of the N-terminal domain in bacterial amylomaltases from the family GH77

Š. Janeček, B. Svensson, M. S. Møller, 2021, 3 Biotech.

The unique glycoside hydrolase family 77 amylomaltase from Borrelia burgdorferi with only catalytic triad conserved.

Š. Janeček, A. Godány, B. Vidová, 2008, FEMS microbiology letters.

Impact of Starch Binding Domain Fusion on Activities and Starch Product Structure of 4-α-Glucanotransferase

Š. Janeček, Yuxiang Bai, B. Svensson, 2023, Molecules.

Phylogenetic and biochemical characterization of a novel cluster of intracellular fungal alpha-amylase enzymes.

L. Dijkhuizen, Š. Janeček, M. van der Maarel, 2007, Microbiology.

α-Amylase: an enzyme specificity found in various families of glycoside hydrolases

Š. Janeček, B. Svensson, E. Macgregor, 2013, Cellular and Molecular Life Sciences.

Chemical stabilization of Bacillus subtilis α-amylase by modification with D-glucono-δ-lactone

S. Balaz, Š. Janeček, M. Rosenberg, 1992 .

Does the increased hydrophobicity of the interior and hydrophilicity of the exterior of an enzyme structure reflect its increased thermostability?

Š. Janeček, 1993, International journal of biological macromolecules.

SQUID Magnetometry and Magneto-Optics of Epitaxial EuSe

Š. Janeček, H. Pascher, H. Krenn, 2004 .

Amylolytic enzymes: molecular aspects of their properties.

Š. Janeček, E. Šturdı́k, E Sturdík, 2001, General physiology and biophysics.

Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes.

Š. Janeček, B. Svensson, E. Macgregor, 2001, Biochimica et biophysica acta.

In silico biosynthesis of virenose, a methylated deoxy-sugar unique to Coxiella burnetii lipopolysaccharide

Š. Janeček, J. Miernyk, Ľ. Škultéty, 2012, Proteome Science.

Starch-binding domains as CBM families-history, occurrence, structure, function and evolution.

Š. Janeček, B. Svensson, E. Macgregor, 2019, Biotechnology advances.

α-Amylase from Thermococcus hydrothermalis: Re-cloning aimed at the improved expression and hydrolysis of corn starch

Š. Janeček, E. Šturdı́k, A. Godány, 2006 .

Relation between domain evolution, specificity, and taxonomy of the alpha-amylase family members containing a C-terminal starch-binding domain.

Š. Janeček, B. Svensson, E. Macgregor, 2003, European journal of biochemistry.

Parallel β/α‐barrels of α‐amylase, cyclodextrin glycosyltransferase and oligo‐1,6‐glucosidase versus the barrel of β‐amylase: Evolutionary distance is a reflection of unrelated sequences

Š. Janeček, 1994 .

Fungal α-amylases from three GH13 subfamilies - Their sequence-structural features and evolutionary relationships.

Š. Janeček, Zuzana Janíčková, 2020, International journal of biological macromolecules.

Gene Sequence, Bioinformatics and Enzymatic Characterization of α-Amylase from Saccharomycopsis fibuligera KZ

Š. Janeček, E. Hostinová, J. Gašperík, 2010, The protein journal.

New insight in cereal starch degradation: identification and structural characterization of four α-amylases in bread wheat

Š. Janeček, J. Ral, J. Mieog, 2017 .

New insight into structure/function relationships in plant alpha-amylase family GH13 members.

Š. Janeček, B. Svensson, A. Blennow, 2010 .

The (α/β)8‐barrel structural domains of α‐amylase and old yellow enzyme are discontinued by a similar excursion at the same place of the barrels: Does it mean they are evolutionarily related?

Š. Janeček, 1996 .

The unique evolution of the carbohydrate‐binding module CBM20 in laforin

Š. Janeček, Matthew S. Gentry, Andrea Kuchtová, 2018, FEBS letters.

Invariant glycines and prolines flanking in loops the strand β2 of various (α/β)8‐barrel enzymes: A hidden homology?

Š. Janeček, 1996, Protein science : a publication of the Protein Society.

Functionally essential, invariant glutamate near the C-terminus of strand β5 in various (α/β)8-barrel enzymes as a possible indicator of their evolutionary relatedness

S. Balaz, Š. Janeček, 1995 .

Š. Janeček, 1995, Protein science : a publication of the Protein Society.

Novel family GH3 β-glucosidases or β-xylosidases of unknown function found in various animal groups, including birds and reptiles.

Marek Gabriško, Š. Janeček, 2015, Carbohydrate research.

Sequence-structural features and evolution of the α-amylase family GH119 revealed by the in silico analysis of its relatedness to the family GH57

Š. Janeček, Adam Poláček, 2023, Biologia.

Š. Janeček, A. Oslancová, 2008, Folia Microbiologica.

The evolution of putative starch‐binding domains

Š. Janeček, M. Machovič, 2006, FEBS letters.

Starch-binding domains in the post-genome era

Š. Janeček, M. Machovič, 2006, Cellular and Molecular Life Sciences CMLS.

A new clan of CBM families based on bioinformatics of starch‐binding domains from families CBM20 and CBM21

Š. Janeček, B. Svensson, M. Machovič, 2005, The FEBS journal.

A detailed in silico analysis of the amylolytic family GH126 and its possible relatedness to family GH76.

Š. Janeček, Lenka Kerényiová, 2020, Carbohydrate research.

New groups of protein homologues in the α-amylase family GH57 closely related to α-glucan branching enzymes and 4-α-glucanotransferases

Š. Janeček, Mária Martinovičová, 2020, Genetica.

Identification of Thermotoga maritima MSB8 GH57 α-amylase AmyC as a glycogen-branching enzyme with high hydrolytic activity

H. Leemhuis, Š. Janeček, T. Pijning, 2019, Applied Microbiology and Biotechnology.

A new group of glycoside hydrolase family 13 α-amylases with an aberrant catalytic triad

L. Dijkhuizen, Š. Janeček, Ihsanawati, 2017, Scientific Reports.

A novel GH13 subfamily of α-amylases with a pair of tryptophans in the helix α3 of the catalytic TIM-barrel, the LPDlx signature in the conserved sequence region V and a conserved aromatic motif at the C-terminus

Š. Janeček, Andrea Kuchtová, Soňa Petrovičová, 2015, Biologia.

α-Amylase: an enzyme specificity found in various families of glycoside hydrolases

Š. Janeček, B. Svensson, E. Macgregor, 2014, Cellular and Molecular Life Sciences.

In silico identification of catalytic residues and domain fold of the family GH119 sharing the catalytic machinery with the α‐amylase family GH57

Š. Janeček, Andrea Kuchtová, 2012, FEBS letters.

Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57

Š. Janeček, Karol Blesák, 2012, Extremophiles.

Structural and evolutionary aspects of two families of non-catalytic domains present in starch and glycogen binding proteins from microbes, plants and animals.

Š. Janeček, B. Svensson, E. Macgregor, 2011, Enzyme and microbial technology.

Sequence-Structural Features and Evolutionary Relationships of Family GH57 α-Amylases and Their Putative α-Amylase-Like Homologues

Š. Janeček, Karol Blesák, 2011, The protein journal.

Tyrosine 39 of GH13 α-amylase from Thermococcus hydrothermalis contributes to its thermostability

Š. Janeček, A. Godány, V. Horváthová, 2010, Biologia.

Domain evolution in the GH13 pullulanase subfamily with focus on the carbohydrate-binding module family 48

Š. Janeček, M. Machovič, 2008, Biologia.

The starch‐binding domain family CBM41—An in silico analysis of evolutionary relationships

Š. Janeček, B. Svensson, E. Macgregor, 2017, Proteins.

α-Amylases from Archaea : Sequences, Structures and Evolution

Š. Janeček, 2016 .

A remote but significant sequence homology between glycoside hydrolase clan GH‐H and family GH31

Š. Janeček, B. Svensson, E. Macgregor, 2007, FEBS letters.

The evolution of starch‐binding domain

Š. Janeček, J. Ševčík, 1999, FEBS letters.

New groups of protein homologues in the α-amylase family GH57 closely related to α-glucan branching enzymes and 4-α-glucanotransferases

Š. Janeček, Mária Martinovičová, 2020, Genetica.

Fungal Hybrid B heme peroxidases – unique fusions of a heme peroxidase domain with a carbohydrate-binding domain

C. Obinger, Š. Janeček, M. Zámocký, 2017, Scientific Reports.

BIOTECHNOLOGICALLY RELEVANT ENZYMES AND PROTEINS Identification of ThermotogamaritimaMSB8 GH57 α-amylase AmyC as a glycogen-branching enzyme with high hydrolytic activity

H. Leemhuis, Š. Janeček, T. Pijning, 2019 .

A motif of a microbial starch-binding domain found in human genethonin

Stefan Janecek, Š. Janeček, 2002, Bioinform..

Protein engineering of selected residues from conserved sequence regions of a novel Anoxybacillus α-amylase

Š. Janeček, Kok-Gan Chan, R. Rahman, 2014, Scientific Reports.

Two structurally related starch-binding domain families CBM25 and CBM26

Š. Janeček, Katarína Majzlová, 2014, Biologia.

Location of repeat elements in glucansucrases of Leuconostoc and Streptococcus species.

Š. Janeček, B. Svensson, R. Russell, 2000, FEMS microbiology letters.

Horizontal gene transfer from Eukarya to Bacteria and domain shuffling: the α-amylase model

Š. Janeček, G. Feller, G. Feller, 2003, Cellular and Molecular Life Sciences CMLS.

Finite-size effects and interactions in artificial graphene formed by repulsive scatterers

I. Kylänpää, Š. Janeček, E. Räsänen, 2015, Journal of physics. Condensed matter : an Institute of Physics journal.

Influence of Dipolar Coupling on the Magnetic Phase Diagram of Few (111)-Monolayer EuTe

Š. Janeček, H. Krenn, P. Granitzer, 2003 .

In Silico Analysis of Fungal and Chloride-Dependent α-Amylases within the Family GH13 with Identification of Possible Secondary Surface-Binding Sites

Š. Janeček, Zuzana Janíčková, 2021, Molecules.

Pectin methylesterases: sequence-structural features and phylogenetic relationships.

Š. Janeček, O. Markovič, 2004, Carbohydrate research.

Amylolytic enzymes: their specificities, origins and properties.

Š. Janeček, E. Šturdı́k, Ernest Šturdík, 2000 .

Structure of Mgn and Mgn+ clusters up to n = 30

Š. Janeček, M. Liebrecht, E. Krotscheck, 2011, 1104.1088.

Evolution of parallel β/α-barrel enzyme family lightened by structural data on starch-processing enzymes

S. Balaz, Š. Janeček, 1993, Journal of protein chemistry.

Amylolytic glycoside hydrolases

Š. Janeček, B. Svensson, 2016, Cellular and Molecular Life Sciences.

Sequence Fingerprints in the Evolution of the α-Amylase Family

Š. Janeček, 2008 .

Š. Janeček, 1994, European journal of biochemistry.

New conserved amino acid region of α-amylases in the third loop of their (β/α)8-barrel domains

Š. Janeček, 1992 .

TOWARDS DFT CALCULATIONS OF METAL CLUSTERS IN QUANTUM FLUID MATRICES

Š. Janeček, M. Liebrecht, S. Chin, 2010 .

Evolution-operator method for density functional theory

Š. Janeček, E. Hernández, E. Krotscheck, 2007 .

News, trends, and challenges in Carbohydrate-Active enZymes

B. Henrissat, H. Brumer, Š. Janeček, 2023, Biologia.

An arbitrary order diffusion algorithm for solving Schrödinger equations

E. Krotscheck, S. Janecek, S. A. Chin, 2009, Comput. Phys. Commun..

Billiards in magnetic fields: a molecular dynamics approach.

Š. Janeček, E. Räsänen, M. Aichinger, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

Horizontal gene transfer from Eukarya to bacteria and domain shuffling: the alpha-amylase model.

Š. Janeček, G. Feller, G Feller, 2004, Cellular and molecular life sciences : CMLS.

Š. Janeček, 1997, International journal of biological macromolecules.

Gauge-invariant real-space method for density functional calculations in an external magnetic field

Š. Janeček, E. Krotscheck, 2008 .

Two potentially novel amylolytic enzyme specificities in the prokaryotic glycoside hydrolase α-amylase family GH57.

Š. Janeček, Karol Blesák, 2013, Microbiology.

The 3rdSymposium on the Alpha-Amylase Family, Smolenice Castle, Slovakia, September 23–27, 2007

Š. Janeček, 2008, Biologia.

AN EFFICIENT DENSITY FUNCTIONAL ALGORITHM IN A STRONG MAGNETIC FIELD