J. Roth

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The influence of codon context on genetic code translation

L. Bossi, J. Roth, 1980, Nature.

Amplification–mutagenesis: Evidence that “directed” adaptive mutation and general hypermutability result from growth with a selected gene amplification

J. Roth, D. Andersson, H. Hendrickson, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Cobalamin (coenzyme B12): synthesis and biological significance.

T. Bobik, J. Roth, J. Lawrence, 1996, Annual review of microbiology.

A Salmonella typhimurium cobalamin-deficient mutant blocked in 1-amino-2-propanol synthesis

J. Roth, C. Grabau, 1992, Journal of bacteriology.

The CobII and CobIII regions of the cobalamin (vitamin B12) biosynthetic operon of Salmonella typhimurium

M. G. Johnson, J. Roth, Michael G. Johnson, 1992, Journal of bacteriology.

Cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium

J. Roth, R. M. Jeter, 1987, Journal of bacteriology.

cobA function is required for both de novo cobalamin biosynthesis and assimilation of exogenous corrinoids in Salmonella typhimurium

J. Roth, S. Suh, J. Escalante‐Semerena, 1990, Journal of bacteriology.

Autogenous regulation of ethanolamine utilization by a transcriptional activator of the eut operon in Salmonella typhimurium

J. Roth, D. Roof, David M. ROOFt, 1992, Journal of bacteriology.

A single regulatory gene integrates control of vitamin B12 synthesis and propanediol degradation

T. Bobik, J. Roth, M. Ailion, 1992, Journal of bacteriology.

Two global regulatory systems (Crp and Arc) control the cobalamin/propanediol regulon of Salmonella typhimurium

T. Bobik, J. Roth, M. Ailion, 1993, Journal of bacteriology.

Selfish operons: horizontal transfer may drive the evolution of gene clusters.

J R Roth, J. Roth, J. Lawrence, 1996, Genetics.

Genetic engineering in vivo using translocatable drug-resistance elements. New methods in bacterial genetics.

D Botstein, D. Botstein, N. Kleckner, 1977, Journal of molecular biology.

Heme-deficient mutants of Salmonella typhimurium: Two genes required for ALA synthesis

J. Roth, T. Elliott, 1989, Molecular and General Genetics MGG.

The Salmonella typbimurium RecJ function permits growth of P22 abc phage on recBCD+ hosts

J. Roth, J. Casadesús, M. Mahan, 1992, Molecular and General Genetics MGG.

Plasmid Copy Number Underlies Adaptive Mutability in Bacteria

J. Roth, S. Maisnier-Patin, Emiko B. Sano, 2014, Genetics.

The Tandem Inversion Duplication in Salmonella enterica: Selection Drives Unstable Precursors to Final Mutation Types

F. P. Roth, J. Mellor, J. Roth, 2010, Genetics.

Ohno's dilemma: Evolution of new genes under continuous selection

J. Roth, D. Andersson, U. Bergthorsson, 2007, Proceedings of the National Academy of Sciences.

Amplification-mutagenesis--how growth under selection contributes to the origin of genetic diversity and explains the phenomenon of adaptive mutation.

J. Roth, D. Andersson, 2004, Research in microbiology.

Adaptive Mutation Requires No Mutagenesis—Only Growth Under Selection: A Response

F. P. Roth, O. Berg, J. Seger, 2003 .

Evidence that selected amplification of a bacterial lac frameshift allele stimulates Lac(+) reversion (adaptive mutation) with or without general hypermutability.

J. Roth, D. Andersson, E. S. Slechta, 2002, Genetics.

The effect of genomic position on reversion of a lac frameshift mutation ( lacIZ 33 ) during non-lethal selection

J. Roth, D. Andersson, E. S. Slechta, 2002 .

Linkage map of Salmonella typhimurium, Edition VI

K. Sanderson, J. Roth, 1983 .

Correction for Adonai et al., Ex vivo cell labeling with 64Cu-pyruvaldehyde-bis(N4-methylthiosemicarbazone) for imaging cell trafficking in mice with positron-emission tomography

G. Schmidt, G. Faluvegi, D. Koch, 2006, Proceedings of the National Academy of Sciences.

Histidine regulatory mutants in Salmonella typhimurium II. Histidine regulatory mutants having altered histidyl-tRNA synthetase.

B. Ames, J. Roth, 1966, Journal of molecular biology.

Genetic mapping of IS200 copies in Salmonella typhimurim strain LT2.

J. Roth, S. Lam, 1983, Genetics.

Recombination between chromosomal IS200 elements supports frequent duplication formation in Salmonella typhimurium.

J. Roth, K. Haack, 1995, Genetics.

Reciprocality of recombination events that rearrange the chromosome.

J. Roth, M. Mahan, John R. Roth, 1988, Genetics.

Genomic buffering mitigates the effects of deleterious mutations in bacteria

Thomas Nyström, T. Nyström, O. Berg, 2005, Nature Genetics.

Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons.

J. Roth, P. Anderson, P Anderson, 1981, Proceedings of the National Academy of Sciences of the United States of America.

Ester Ibañez from Weak Organic Acid Stress enterica Salmonella Polyphosphate Kinase Protects

J. Roth, T. Fazzio, M. Price-Carter, 2004 .

Characterization of Tn10d-Cam: A transposition-defective Tn10 specifying chloramphenicol resistance

J. Roth, T. Elliott, 1988, Molecular and General Genetics MGG.

A novel P22 prophage in Salmonella typhimurium.

J. Roth, D. Downs, 1987, Genetics.

Genetic structure and regulation of the cysG gene in Salmonella typhimurium

B. Goldman, J. Roth, 1993, Journal of bacteriology.

Crystalline Boron Nanoribbons: Synthesis and Characterization

Rodney S. Ruoff, D. Dikin, R. Ruoff, 2004 .

Suppressors of recB mutations in Salmonella typhimurium.

J. Roth, N. Benson, 1994, Genetics.

Sinorhizobium meliloti bluB is necessary for production of 5,6-dimethylbenzimidazole, the lower ligand of B12.

J. Roth, J. Lloret, Gordon R. O. Campbell, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Evidence that the CysG protein catalyzes the first reaction specific to B12 synthesis in Salmonella typhimurium, insertion of cobalt

J. Roth, T. Fazzio, 1996, Journal of bacteriology.

Where's the Beef? Looking for Information in Bacterial Chromosomes

J. Roth, 2005 .

Private Cofactor Pools Microcompartment Contains and Recycles Evidence that a Metabolic

J. Roth, D. Huseby, 2014 .

Evidence that a Metabolic Microcompartment Contains and Recycles Private Cofactor Pools

J. Roth, D. Huseby, 2013, Journal of bacteriology.

Human vitamin B12 absorption measurement by accelerator mass spectrometry using specifically labeled (14)C-cobalamin.

J. Roth, S. Dueker, B. Buchholz, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Identification of mutations that alter the gating of the Escherichia coli mechanosensitive channel protein, MscK

J. Roth, I. Booth, M. Edwards, 2007, Molecular microbiology.

Isolation and characterization of lon mutants in Salmonella typhimurium

A. Goldberg, J. Roth, D. Downs, 1986, Journal of bacteriology.

Cluster of genes controlling proline degradation in Salmonella typhimurium

J. Roth, B. Ratzkin, Barry RATZKINt, 1978, Journal of bacteriology.

PROTEASE II-DEFICIENT S . TYPHIMURIUM MUTANTS 589

Gale, J. Roth, J. Gots, 2022 .

Activation of silent genes by transposons Tn5 and Tn10.

J. Roth, A. Wang, 1988, Genetics.

Polarity effects in the hisG gene of salmonella require a site within the coding sequence.

J. Roth, M. Ciampi, 1988, Genetics.

Internal promoters of the his operon in Salmonella typhimurium

J. Roth, M. Schmid, 1983, Journal of bacteriology.

Sister-chromosome Exchanges Gene Duplication in Bacteria: Alteration of Gene Dosage by

J. Roth, R. P. Anderson, 2012 .

One Pathway Can Incorporate either Adenine or Dimethylbenzimidazole as an (cid:2) -Axial Ligand of B 12 Cofactors in Salmonella enterica (cid:1)

B. Kräutler, J. Roth, B. Hammock, 2008 .

Hfr FORMATION DIRECTED BY TnlO

J. Roth, F. Chumley, R. Menzel, 2003 .

Structural gene for NAD synthetase in Salmonella typhimurium

J. Roth, K. Hughes, B. Olivera, 1988, Journal of bacteriology.

Isolation andCharacterization ofIonMutants in Salmonella typhimurium

J. Roth, L. Waxman, 1986 .

6-Aminonicotinamide-resistant mutants of Salmonella typhimurium

J. Roth, K. Hughes, B. Cookson, 1983, Journal of bacteriology.

UGA suppressor that maps within a cluster of ribosomal protein genes

H. Johnston, J. Roth, 1980, Journal of bacteriology.

Circularization of transduced fragments: a mechanism for adding segments to the bacterial chromosome.

J. Roth, M. Schmid, 1980, Genetics.

A refined map of the hisG gene of Salmonella typhimurium.

H. Johnston, J. Roth, D. Biek, 1979, Genetics.

6-Aminonicotinamide-Resistant Mutants of Salmonella

J. Roth, K. Hughes, B. Cookson, 2022 .

REARRANGEMENT OF THE BACTERIAL CHROMOSOME USING Tn10 AS A REGION OF HOMOLOGY

J. Roth, F. Chumley, 1980 .

An Open Letter to Elias Zerhouni

Jeffrey W. Roberts, N. Cozzarelli, C. Yanofsky, 2005, Science.

Structural genes for catalytic and regulatory subunits of aspartate transcarbamylase.

J. Roth, J. M. Syvanen, J. Syvanen, 1973, Journal of molecular biology.

Regulation of proline utilization in Salmonella typhimurium: characterization of put::Mu d(Ap, lac) operon fusions

J. Roth, S. Maloy, 1983, Journal of bacteriology.

Gut inflammation provides a respiratory electron acceptor for Salmonella

J. Roth, C. Bevins, S. Winter, 2010, Nature.

A rationale for autoinduction of a transcriptional activator: ethanolamine ammonia-lyase (EutBC) and the operon activator (EutR) compete for adenosyl-cobalamin in Salmonella typhimurium

J. Roth, D. Sheppard, 1994, Journal of bacteriology.

Evidence that a B12-Adenosyl Transferase Is Encoded within the Ethanolamine Operon of Salmonella enterica

T. Bobik, J. Roth, E. Kofoid, 2004, Journal of bacteriology.

Transposon Tn10 provides a promoter for transcription of adjacent sequences.

J. Roth, M. Schmid, M. Ciampi, 1982, Proceedings of the National Academy of Sciences of the United States of America.

The nadI region of Salmonella typhimurium encodes a bifunctional regulatory protein

J. Roth, N. Zhu, 1991, Journal of bacteriology.

Transfer RNA and the control of the histidine operon.

G. Fink, B. Ames, J. Roth, 1966, Cold Spring Harbor symposia on quantitative biology.

The end of the cob operon: evidence that the last gene (cobT) catalyzes synthesis of the lower ligand of vitamin B12, dimethylbenzimidazole

J. Roth, P. Chen, N. Weyand, 1995, Journal of bacteriology.

Genetic approaches to determination of enzyme quaternary structure.

J. Roth, K. Lew, Kenneth K. Lew, 1971, Biochemistry.

Synthesis of thiamine in Salmonella typhimurium independent of the purF function

J. Roth, D. Downs, Diana M. DOWNSt, 1991, Journal of bacteriology.

Genetic fusions that place the lactose genes under histidine operon control.

J. Roth, F. Chumley, 1981, Journal of molecular biology.

Evidence for two NAD kinases in Salmonella typhimurium

J. Roth, W. Cheng, 1994, Journal of bacteriology.

Identification of a repressor gene involved in the regulation of NAD de novo biosynthesis in Salmonella typhimurium

J. Roth, B. Olivera, N. Zhu, 1988, Journal of bacteriology.

Adaptive Mutation Controversy

J. Roth, S. Maisnier-Patin, S. Maisnier‐Patin, 2016 .

Activity of the nicotinamide mononucleotide transport system is regulated in Salmonella typhimurium

J. Roth, B. Olivera, N. Zhu, 1991, Journal of bacteriology.

Genetic methods for analysis and manipulation of inversion mutations in bacteria.

J. Roth, M. Schmid, John R. Roth, 1983, Genetics.

Isolation of P22 specialized transducing phage followong F'-episome fusion.

J. Roth, J. Barravecchio, R. Kaye, 1974, Genetics.

Assimilation of Nicotinamide Mononucleotide Requires Periplasmic AphA Phosphatase in Salmonella enterica

J. Roth, J. Grose, U. Bergthorsson, 2005, Journal of bacteriology.

An indispensable gene for NAD biosynthesis in Salmonella typhimurium

J. Roth, K. Hughes, B. Olivera, 1983, Journal of bacteriology.

Genetic characterization of the pdu operon: use of 1,2-propanediol in Salmonella typhimurium

J. Roth, M. Ailion, D. Walter, 1997, Journal of bacteriology.

Genetic characterization of the pnuC gene, which encodes a component of the nicotinamide mononucleotide transport system in Salmonella typhimurium

J. Roth, B. Olivera, N. Zhu, 1989, Journal of bacteriology.

Structural Genes for Ornithine Transcarbamylase in Salmonella typhimurium and Escherichia coli K-12

J. Roth, J. M. Syvanen, J. Syvanen, 1972, Journal of bacteriology.

Role of recBC function in formation of chromosomal rearrangements: a two-step model for recombination.

J. Roth, M. Mahan, 1989, Genetics.

UGA Nonsense Mutations in Salmonella typhimurium

J. Roth, 1970, Journal of bacteriology.

Histidine and Aromatic Permeases of Salmonella typhimurim

G. Ames, J. Roth, 1968, Journal of bacteriology.

Regulation of Tn5 transposition.

J. Roth, D. Biek, 1981, Cold Spring Harbor symposia on quantitative biology.

Enzyme Evolution: Generation of a Bifunctional Enzyme by Fusion of Adjacent Genes

J. Roth, T. Kohno, J. Yourno, 1970, Nature.

Advanced bacterial genetics

D. Botstein, J. Roth, Ronald W. Davis, 1980 .

Polyphosphate Kinase Protects Salmonella enterica from Weak Organic Acid Stress

J. Roth, T. Fazzio, M. Price-Carter, 2005, Journal of bacteriology.

The Alternative Electron Acceptor Tetrathionate Supports B12-Dependent Anaerobic Growth ofSalmonella enterica Serovar Typhimurium on Ethanolamine or 1,2-Propanediol

T. Bobik, J. Roth, M. Price-Carter, 2001, Journal of bacteriology.

Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium

Harvard Medical School, J R Roth, G. Church, 1993, Journal of bacteriology.

Erratum: Human vitamin B12 absorption measurement by accelerator mass spectrometry using specifically labeled 14C-cobalamin (Proceedings of the National Academy of Sciences of the United States of America (April 11, 2006) 15, 103 (5694-5699) DOI: 10.1073/pnas.0601251103)

J. Roth, S. Dueker, B. Buchholz, 2006 .

Histidine regulatory mutants in Salmonella typhimurium. I. Isolation and general properties.

J. Roth, P. Hartman, D. Antón, 1966, Journal of molecular biology.

Contribution of Gene Amplification to Evolution of Increased Antibiotic Resistance in Salmonella typhimurium

O. Berg, J. Roth, D. Andersson, 2009, Genetics.

Genomic Flux: Genome Evolution by Gene Loss and Acquisition

J. Roth, J. Lawrence, 1999 .

Salmonella typhimurium synthesizes cobalamin (vitamin B12) de novo under anaerobic growth conditions

J. Roth, B. Olivera, R. M. Jeter, 1984, Journal of bacteriology.

Proflavin mutagenesis of bacteria.

J. Roth, T. Kohno, Tadahiko Kohno, 1974, Journal of molecular biology.

Linkage map of Salmonella typhimurium, Edition VI.

K. Sanderson, J. Roth, 1983, Microbiological reviews.

Linkage map of Salmonella typhimurium, edition VII

J R Roth, K. Sanderson, J. Roth, 1988, Microbiological reviews.

Procedure for Identifying Nonsense Mutations

B. Ames, J. Roth, D. Berkowitz, 1968, Journal of bacteriology.

Lethal transposition of Mud phages in Rec- strains of Salmonella typhimurium.

J. Roth, R. Sonti, D. Keating, 1993, Genetics.

Rec dependence of mu transposition from P22-transduced fragments

J. Roth, K. Hughes, B. Olivera, 1987, Journal of bacteriology.

Conserving a Volatile Metabolite: a Role for Carboxysome-Like Organelles in Salmonella enterica

J. Roth, J. Penrod, 2006, Journal of bacteriology.

A pH-Sensitive Function and Phenotype: Evidence that EutH Facilitates Diffusion of Uncharged Ethanolamine in Salmonella enterica

J. Roth, J. Penrod, Christopher C. Mace, 2004, Journal of bacteriology.

The 17-Gene Ethanolamine (eut) Operon ofSalmonella typhimurium Encodes Five Homologues of Carboxysome Shell Proteins

J. Roth, E. Kofoid, I. Stojiljković, 1999, Journal of bacteriology.

Ethanolamine utilization in Salmonella typhimurium

J. Roth, D. Roof, 1988, Journal of bacteriology.

Regulation of cobalamin biosynthetic operons in Salmonella typhimurium

J. Roth, J. Escalante‐Semerena, 1987, Journal of bacteriology.

Functions required for vitamin B12-dependent ethanolamine utilization in Salmonella typhimurium

J. Roth, D. Roof, 1989, Journal of bacteriology.

Regulation of the major proline permease gene of Salmonella typhimurium

J. Roth, B. Ratzkin, M. Grabnar, 1978, Journal of bacteriology.

Propanediol utilization genes (pdu) of Salmonella typhimurium: three genes for the propanediol dehydratase

T. Bobik, J. Roth, Y. Xu, 1997, Journal of bacteriology.

Transfer ribonucleic acid methylase deficiency found in UGA supressor strains

J. Roth, R. Reeves, R. Reeves, 1975, Journal of bacteriology.

Rearrangements of the Bacterial Chromosome : Formation and Applications

T. Galitski, J. Roth, J. Lawrence, 1999 .

Tandem chromosomal duplications in Salmonella typhimurium: fusion of histidine genes to novel promoters.

J R Roth, J. Roth, R P Anderson, 1978, Journal of molecular biology.

Tandem genetic duplications in phage and bacteria.

J R Roth, J. Roth, R P Anderson, 1977, Annual review of microbiology.

Mechanisms of gene duplication and amplification.

J. Roth, Andrew B. Reams, Andrew B Reams, 2015, Cold Spring Harbor perspectives in biology.

Evolution of coenzyme B12 synthesis among enteric bacteria: evidence for loss and reacquisition of a multigene complex.

J R Roth, J. Roth, J. Lawrence, 1996, Genetics.

The cobalamin (coenzyme B12) biosynthetic genes of Escherichia coli

J. Roth, J. Lawrence, 1995, Journal of bacteriology.

Characterization oftheCobalamin (Vitamin B12)Biosynthetic GenesofSalmonella typhimurium

M. Rubenfield, J. Roth, 1993 .

[1] Genetic techniques in studies of bacterial metabolism

J. Roth, 1970 .

Frameshift suppressors: II. Genetic mapping and dominance studies☆☆☆

D. Riddle, J. Roth, 1972 .

Evidence that F plasmid transfer replication underlies apparent adaptive mutation.

T. Galitski, J. Roth, 1995, Science.

Real-Time Evolution of New Genes by Innovation, Amplification, and Divergence

J. Roth, Lei Sun, Joakim Näsvall, 2012, Science.

Model for regulation of the histidine operon of Salmonella.

H. Johnston, L. Bossi, J. Roth, 1980, Proceedings of the National Academy of Sciences of the United States of America.

Linkage map of Salmonella typhimurium, edition VII

K. Sanderson, J. Roth, 1988 .

Frameshift suppressors. II. Genetic mapping and dominance studies.

D. Riddle, J. Roth, 1972, Journal of molecular biology.

Suppressor-dependent frameshift mutants of bacteriophage P22

J. Roth, Joanne R. Uomini, 2004, Molecular and General Genetics MGG.

Target sequences for mutagenesis in Salmonella histidine-requiring mutants.

B. Ames, D. E. Levin, J. Roth, 1986, Environmental mutagenesis.

A Salmonella frameshift suppressor that acts at runs of A residues in the messenger RNA.

J. Roth, T. Kohno, 1978, Journal of molecular biology.

A recessive UGA suppressor.

J. Roth, R. Reeves, R. Reeves, 1971, Journal of molecular biology.

Suppressors of frameshift mutations in Salmonella typhimurium.

D. Riddle, J. Roth, J. R. Roth, 1970, Journal of molecular biology.

Phenotypes of lexA Mutations in Salmonella enterica: Evidence for a Lethal lexA Null Phenotype Due to the Fels-2 Prophage

J. Roth, Jing Liu, K. Bunny, 2002, Journal of bacteriology.

Multiple pathways of selected gene amplification during adaptive mutation

J. Roth, E. Kofoid, D. Andersson, 2006, Proceedings of the National Academy of Sciences.

Chromosomal duplications in bacteria, fruit flies, and humans.

J. Lupski, G. Weinstock, J. Roth, 1996, American journal of human genetics.

Multiple Pathways of Duplication Formation with and Without Recombination (RecA) in Salmonella enterica

J. Roth, E. Kofoid, Andrew B. Reams, 2012, Genetics.

Yeast suppressors of UAA and UAG nonsense codons work efficiently in vitro via tRNA

D. Botstein, G. Fink, R. Gesteland, 1976, Cell.

Salmonella typhimurium mutants lacking NAD pyrophosphatase

J. Roth, B. Olivera, U. Park, 1988, Journal of bacteriology.

Histidine Regulation in Salmonella typhimurium VIII. Mutations of the hisT Gene

B. Ames, J. Roth, G. Chang, 1971, Journal of bacteriology.

Role of gene duplications in the adaptation of Salmonella typhimurium to growth on limiting carbon sources.

J R Roth, J. Roth, R. Sonti, 1989, Genetics.

Transitory cis complementation: a method for providing transposition functions to defective transposons.

J. Roth, K. Hughes, 1988, Genetics.

Surveying a supercoil domain by using the gamma delta resolution system in Salmonella typhimurium

J. Roth, Q. Fu, X. Yang, 1996, Journal of bacteriology.

Ability of a bacterial chromosome segment to invert is dictated by included material rather than flanking sequence.

J R Roth, J. Roth, M. Mahan, 1991, Genetics.

Recombination between homologies in direct and inverse orientation in the chromosome of Salmonella: intervals which are nonpermissive for inversion formation.

A. Segall, J. Roth, 1989, Genetics.

Rearrangement of the bacterial chromosome: forbidden inversions.

A. Segall, J. Roth, M. Mahan, 1988, Science.

Selection and endpoint distribution of bacterial inversion mutations.

J. Roth, M. Schmid, 1983, Genetics.

Regulation of the genes for proline utilization in Salmonella typhimurium: autogenous repression by the putA gene product.

J. Roth, R. Menzel, John R. Roth, 1981, Journal of molecular biology.

Genetic analysis of the histidine operon control region of Salmonella typhimurium.

H. Johnston, J. Roth, 1981, Journal of molecular biology.

Surveying a Supercoil Domain by Using the (cid:103)(cid:100) Resolution System in Salmonella typhimurium

J. Roth, Fu Qingquan, N. Higgins, 1996 .

The Origin of Mutants under Selection: Interactions of Mutation, Growth, and Selection.

J. Roth, D. Andersson, D. Hughes, 2011, EcoSal Plus.

Origin of mutations under selection: the adaptive mutation controversy.

J. Roth, E. Kofoid, D. Andersson, 2006, Annual review of microbiology.

Evidence that feedback inhibition of NAD kinase controls responses to oxidative stress

Lisa Joss, J. Roth, L. Joss, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Regulation of NAD Synthesis by the Trifunctional NadR Protein of Salmonella enterica

J. Roth, J. Grose, U. Bergthorsson, 2005, Journal of bacteriology.

Construction of chromosomal rearrangements in Salmonella by transduction: inversions of non-permissive segments are not lethal.

A. Segall, J. Roth, L. Miesel, 1994, Genetics.

Regulating general mutation rates: examination of the hypermutable state model for Cairnsian adaptive mutation.

O. Berg, J. Seger, J. Roth, 2003, Genetics.

Muller’s Ratchet

J. Roth, 2013 .

Advanced Bacterial Genetics: A Manual for Genetic Engineering

D. Botstein, J. Roth, Ronald W. Davis, 1980 .

Gene duplication in bacteria: alteration of gene dosage by sister-chromosome exchanges.

J R Roth, J. Roth, R P Anderson, 1979, Cold Spring Harbor symposia on quantitative biology.

Specialized transducing phages derived from salmonella phage P22.

J. Roth, I. Hoppe, Inge Hoppe, 1974, Genetics.

Transposition without transposase: a spontaneous mutation in bacteria

J. Roth, C. Rappleye, 1997, Journal of bacteriology.

Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 324 Modeling Genome Evolution Creation , Change and Destruction

Mats E. Pettersson, J. Roth, D. Andersson, 2007 .

Approaches to half-tetrad analysis in bacteria: recombination between repeated, inverse-order chromosomal sequences.

A. Segall, J. Roth, 1994, Genetics.

Directed formation of deletions and duplications using Mud(Ap, lac).

J. Roth, K. Hughes, 1985, Genetics.

Tandem duplications of the histidine operon observed following generalized transduction in Salmonella typhimurium.

J R Roth, C. Miller, J. Roth, 1976, Journal of molecular biology.

DNA sequence changes of mutations altering attenuation control of the histidine operon of Salmonella typhimurium.

H. Johnston, J. Roth, 1981, Journal of molecular biology.

Selective Inbreeding: Genetic Crosses Drive Apparent Adaptive Mutation in the Cairns-Foster System of Escherichia coli

J. Roth, E. Kofoid, Amanda Nguyen, 2019, Genetics.

Selection and Plasmid Transfer Underlie Adaptive Mutation in Escherichia coli

J. Roth, S. Maisnier‐Patin, 2018, Genetics.

The Origin of Mutants Under Selection: How Natural Selection Mimics Mutagenesis (Adaptive Mutation).

J. Roth, S. Maisnier‐Patin, 2015, Cold Spring Harbor perspectives in biology.

Pathways of Genetic Adaptation: Multistep Origin of Mutants Under Selection Without Induced Mutagenesis in Salmonella enterica

J. Roth, Andrew B. Reams, Semarhy Quiñones-Soto, 2012, Genetics.

Effect of Growth Under Selection on Appearance of Chromosomal Mutations in Salmonella enterica

J. Roth, Semarhy Quiñones-Soto, 2011, Genetics.

The joys and terrors of fast adaptation: new findings elucidate antibiotic resistance and natural selection

J. Roth, 2011, Molecular microbiology.

Genetic Adaptation: A New Piece for a Very Old Puzzle

J. Roth, 2010, Current Biology.

Accumulation of mutants in “aging” bacterial colonies is due to growth under selection, not stress-induced mutagenesis

J. Roth, D. Hughes, Marie Wrande, 2008, Proceedings of the National Academy of Sciences.

Adaptive Mutation: How Growth under Selection Stimulates Lac+ Reversion by Increasing Target Copy Number

J. Roth, D. Andersson, 2004, Journal of bacteriology.

Rebuttal: Adaptive Point Mutation (Rosenberg and Hastings)

J. Roth, D. Andersson, 2004, Journal of Bacteriology.

Rebuttal: Adaptive Mutation in Escherichia coli (Foster)

J. Roth, D. Andersson, 2004, Journal of bacteriology.

Hfr formation directed by tn10.

R Menzel, J R Roth, J. Roth, 1979, Genetics.

Evidence that gene amplification underlies adaptive mutability of the bacterial lac operon.

J. Roth, D. Andersson, E. S. Slechta, 1998, Science.

Adaptive mutation: General mutagenesis is not a programmed response to stress but results from rare coamplification of dinB with lac

J. Roth, E. Kofoid, D. Andersson, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Gene location affects expression level in Salmonella typhimurium

J. Roth, M. Schmid, Molly Schmidt, 1987, Journal of bacteriology.

A Tn10 derivative (T-POP) for isolation of insertions with conditional (tetracycline-dependent) phenotypes

J. Roth, C. Rappleye, 1997, Journal of bacteriology.

Histidine mutants requiring adenine: selection of mutants with reduced hisG expression in Salmonella typhimurium.

J R Roth, H. Johnston, J. Roth, 1979, Genetics.

The control region of the pdu/cob regulon in Salmonella typhimurium

J. Roth, P. Chen, D. Andersson, 1994, Journal of bacteriology.

DNA ligase and the pyridine nucleotide cycle in Salmonella typhimurium

J. Roth, K. Hughes, B. Olivera, 1989, Journal of bacteriology.

Recombination and Annealing Pathways Compete for Substrates in Making rrn Duplications in Salmonella enterica

J. Roth, E. Kofoid, Andrew B. Reams, 2013, Genetics.

Structural and Functional Studies of Insertion Element IS 200 Stephen Lam ?

J. Roth, 2003 .

Regulation of Tn5 transposition in Salmonella typhimurium.

J. Roth, D. Biek, 1980, Proceedings of the National Academy of Sciences of the United States of America.

Natural Isolates of Salmonella enterica Serovar Dublin Carry a Single nadA Missense Mutation

J. Roth, U. Bergthorsson, 2005, Journal of bacteriology.

Transcriptional occlusion of transposon targets

J. Roth, J. Casadesús, 1989, Molecular and General Genetics MGG.

Mutations in the spoT gene of Salmonella typhimurium: effects on his operon expression

K. Rudd, J. Roth, B. Bochner, 1985, Journal of bacteriology.

Frameshift mutations.

J. Roth, 1974, Annual review of genetics.

Purification of the putA gene product. A bifunctional membrane-bound protein from Salmonella typhimurium responsible for the two-step oxidation of proline to glutamate.

J. Roth, R. Menzel, 1981, The Journal of biological chemistry.

Conditionally transposition-defective derivative of Mu d1(Amp Lac)

J. Roth, K. Hughes, 1984, Journal of bacteriology.

recB and recC genes of Salmonella typhimurium

J. Roth, M. Mahan, 1989, Journal of bacteriology.

The Promiscuous sumA Missense Suppressor from Salmonella enterica Has an Intriguing Mechanism of Action

J. Roth, E. Altman, Ashley E Cole, 2016, Genetics.

Pathways for homologous recombination between chromosomal direct repeats in Salmonella typhimurium.

T. Galitski, J. Roth, 1997, Genetics.

Salmonella recD mutations increase recombination in a short sequence transduction assay

J. Roth, L. Miesel, 1994, Journal of bacteriology.

Redox regulation of the genes for cobinamide biosynthesis in Salmonella typhimurium

J. Roth, D. Andersson, 1989, Journal of bacteriology.

Mutations affecting regulation of cobinamide biosynthesis in Salmonella typhimurium

J. Roth, D. Andersson, 1989, Journal of bacteriology.

Lethal Mutations in the Isoprenoid Pathway of Salmonella enterica

C. Dale Poulter, J. Roth, C. Poulter, 2006, Journal of bacteriology.

Intestinal inflammation allows Salmonella to use ethanolamine to compete with the microbiota

J. Roth, V. Tolstikov, S. Winter, 2011, Proceedings of the National Academy of Sciences.

A search for a general phenomenon of adaptive mutability.

T. Galitski, J. Roth, 1996, Genetics.

Evidence that SbcB and RecF pathway functions contribute to RecBCD-dependent transductional recombination

J. Roth, L. Miesel, John R. Roth, 1996, Journal of bacteriology.

Tandem genetic duplications in Salmonella typhimurium: amplification of the histidine operon.

J. Roth, R. P. Anderson, 1978, Journal of molecular biology.

One Pathway Can Incorporate either Adenine or Dimethylbenzimidazole as an α-Axial Ligand of B12 Cofactors in Salmonella enterica

B. Kräutler, J. Roth, B. Hammock, 2007, Journal of bacteriology.

Integration of the pSLT Plasmid into the Salmonella Chromosome Results in a Temperature-Sensitive Growth Defect Due to Aberrant DNA Replication

J. Roth, K. Hughes, B. Olivera, 2020, Journal of Bacteriology.

Identification and mapping of a second proline permease Salmonella typhimurium

J. Roth, R. Menzel, 1980, Journal of bacteriology.

Frameshift suppression

J. Roth, 1981, Cell.

Jared Salmonella enterica AphA Phosphatase in Mononucleotide Requires Periplasmic Assimilation of Nicotinamide

J. Roth, J. Grose, U. Bergthorsson, 2005 .

A genetic characterization of the nadC gene of Salmonella typhimurium.

J. Roth, K. Hughes, B. Olivera, 1991, Genetics.

Formation of an F′ Plasmid by Recombination between Imperfectly Repeated Chromosomal Rep Sequences: a Closer Look at an Old Friend (F′128pro lac)

J. Roth, E. Kofoid, E. S. Slechta, 2003, Journal of bacteriology.

IS200: A salmonella-specific insertion sequence

J. Roth, S. Lam, 1983, Cell.

Effect of chromosome location on bacterial mutation rates.

H. Ochman, J. Roth, U. Bergthorsson, 2002, Molecular biology and evolution.

A Salmonella phage-P22 mutant defective in abortive transduction.

J. Roth, N. Benson, 1997, Genetics.

A New Class of Cobalamin Transport Mutants (btuF) Provides Genetic Evidence for a Periplasmic Binding Protein in Salmonella typhimurium

J. Roth, C. Bradbeer, M. Van Bibber, 1999, Journal of bacteriology.

Repression of the cob operon of Salmonella typhimurium by adenosylcobalamin is influenced by mutations in the pdu operon

J. Roth, M. Ailion, John R. Roth, 1997, Journal of bacteriology.

Five promoters integrate control of the cob/pdu regulon in Salmonella typhimurium

G. Stormo, T. Bobik, J. Roth, 1995, Journal of bacteriology.

regulon in Salmonella typhimurium. Five promoters integrate control of the cob/pdu

G. Stormo, T. Bobik, J. Roth, 2012 .

Salmonella typhimurium. The control region of the pdu/cob regulon in

J. Roth, D. Andersson, Ping Chen, 2012 .

Enzymatic properties of the purified putA protein from Salmonella typhimurium.

J. Roth, R. Menzel, 1981, The Journal of biological chemistry.

Microbial Evolution The origin of mutants under selection : How natural selection mimics mutability ( adaptive mutation )

J. Roth, Sophie Maisnier-Patin smaisnierpatin, 2022 .

Selection-Enhanced Mutagenesis of lac Genes Is Due to Their Coamplification with dinB Encoding an Error-Prone DNA Polymerase

J. Roth, S. Maisnier‐Patin, Itsugo Yamayoshi, 2018, Genetics.

Absence of insertions among spontaneous mutants of Salmonella typhimurium

J. Roth, J. Casadesús, 1989, Molecular and General Genetics MGG.

Histidine regulatory mutants in Salmonella typhiumium. VI. Dominance studies.

G. Fink, J. Roth, Gerald R. Fink, 1968, Journal of molecular biology.

Duplication Frequency in a Population of Salmonella enterica Rapidly Approaches Steady State With or Without Recombination

M. Savageau, J. Roth, E. Kofoid, 2010, Genetics.

The Amplification Model for Adaptive Mutation

Mats E. Pettersson, O. Berg, J. Roth, 2005, Genetics.

Single Crystalline Alkaline-Earth Metal Hexaboride One-Dimensional (1D) Nanostructures: Synthesis and Characterization

J. Roth, T. Xu, S. Amin, 2009 .

Genetic characterization and regulation of the nadB locus of Salmonella typhimurium

J. Roth, B. Cookson, B. Olivera, 1987, Journal of bacteriology.

Aspects of NAD Metabolism in Prokaryotes and Eukaryotes

J. Roth, K. Hughes, B. Olivera, 1989 .

Reinterpreting Long-Term Evolution Experiments: Is Delayed Adaptation an Example of Historical Contingency or a Consequence of Intermittent Selection?

J. Roth, S. Maisnier‐Patin, 2016, Journal of bacteriology.

The evolution of a pleiotropic fitness tradeoff in Pseudomonas fluorescens.

G. Bell, R. MacLean, J. Roth, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Four-base codons ACCA, ACCU and ACCC are recognized by frameshift suppressor sufJ

L. Bossi, J. Roth, 1981, Cell.

An in vivo study of novel bioactive peptides that inhibit the growth of Escherichia coli.

J. Roth, E. Altman, J. Walker, 2001, The journal of peptide research : official journal of the American Peptide Society.

Isolation of NAD cycle mutants defective in nicotinamide mononucleotide deamidase in Salmonella typhimurium

J. Roth, W. Cheng, 1995, Journal of bacteriology.

The effect of genomic position on reversion of a lac frameshift mutation (lacIZ33) during non‐lethal selection (adaptive mutation)

J. Roth, D. Andersson, E. S. Slechta, 2002, Molecular microbiology.

Heterogeneity in P22 transducing particles.

J. Roth, P. Hartman, J. R. Roth, 1965, Virology.

Linkage map of Salmonella typhimurium, edition IV

K. Sanderson, J. Roth, K E Sanderson, 1972, Bacteriological reviews.

Genetic Approaches to the Synthesis and Physiological Significance of B12 in Salmonella typhimurium

J. Roth, T. Doak, C. Grabau, 1990 .

SIGNIFICANCE OF B12 IN SALMONELLA TYPHIMURIUM

J. Roth, T. Doak, C. Grabau, 1990 .

Regulation of histidine operon does not require hisG enzyme.

J. Roth, S. Artz, J. Scott, 1975, Proceedings of the National Academy of Sciences of the United States of America.

Linkage map of Salmonella typhimurium, Edition VI

K. Sanderson, J. Roth, 1983, Microbiological reviews.

Structural and functional studies of insertion element IS200.

J. Roth, S. Lam, 1986, Journal of molecular biology.

Real-Time Evolution of New Genes by Innovation, Amplification, and Divergence

J. Roth, Lei Sun, Joakim Näsvall, 2012, Science.

Electrolyte effects on the activity of mutant enzymes in vivo and in vitro.

J. Roth, T. Kohno, 1979, Biochemistry.

dimethylbenzimidazole. lower ligand of vitamin B12, last gene (cobT) catalyzes synthesis of the The end of the cob operon: evidence that the

J. Roth, N. Weyand, M. Ailion, 2012 .

Autogenous Regulation ofEthanolamine Utilization bya Transcriptional Activator oftheeutOperon in Salmonella typhimunium

J. Roth, 1992 .

Orientation of the isoleucine-valine genes in the Salmonella typhimurium linkage map.

K. Sanderson, J. Roth, 1966, Genetics.

Recessive-lethal nonsense suppressors in Salmonella typhimurium.

J. Roth, C. G. Miller, 1971, Journal of molecular biology.