ChenWei Lin

发表

Head-to-head comparison of serum fractionation techniques.

Jeffrey R. Whiteaker, J. F. Keane, Regine M. Schoenherr, 2007, Journal of proteome research.

Computational Proteomics Analysis System (CPAS): an extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments.

Adam Rauch, Jeffrey Whiteaker, Heidi Zhang, 2006, Journal of proteome research.

DNA Replication Stress Phosphoproteome Profiles Reveal Novel Functional Phosphorylation Sites on Xrs2 in Saccharomyces cerevisiae

Jacob J. Kennedy, A. Paulovich, B. Piening, 2016, Genetics.

The Human Salivary Proteome is Radiation Responsive

Uliana J. Voytovich, A. Paulovich, D. Stirewalt, 2014, Radiation research.

Sequential Multiplexed Analyte Quantification Using Peptide Immunoaffinity Enrichment Coupled to Mass Spectrometry*

Jeffrey R. Whiteaker, A. Paulovich, ChenWei Lin, 2011, Molecular & Cellular Proteomics.

Identification of a Blood-Based Protein Biomarker Panel for Lung Cancer Detection

Jeffrey R. Whiteaker, Jacob J. Kennedy, A. Paulovich, 2020, Cancers.

Proteogenomics connects somatic mutations to signaling in breast cancer

Michael L. Gatza, Kelly V. Ruggles, S. Carr, 2016, Nature.

Multiplexed quantification of estrogen receptor and HER2/Neu in tissue and cell lysates by peptide immunoaffinity enrichment mass spectrometry

Jeffrey R. Whiteaker, Regine M. Schoenherr, Uliana J. Voytovich, 2012, Proteomics.

Targeted mass spectrometry enables robust quantification of FANCD2 mono-ubiquitination in response to DNA damage.

Jeffrey R. Whiteaker, Regine M. Schoenherr, A. Paulovich, 2018, DNA repair.

Internal Standard Triggered-Parallel Reaction Monitoring Mass Spectrometry Enables Multiplexed Quantification of Candidate Biomarkers in Plasma

Jeffrey R. Whiteaker, Lisa A. Jones, Jacob J. Kennedy, 2022, Analytical chemistry.

Erratum: Computational Proteomics Analysis System (CPAS): An extensible, open-source analytic system for evaluating and publishing proteomic data and high throughput biological experiments (Journal of Proteome Research (2006) 5 (112-121))

David J. States, Brendan MacLean, Adam Rauch, 2006 .

State-dependent protein-protein interactions mediating 4-1BB CAR Signaling

Philip R. Gafken, ChenWei Lin, Josh Gustafson, 2022, bioRxiv.

Preserving the Phosphoproteome of Clinical Biopsies Using a Quick-Freeze Collection Device.

Jeffrey R. Whiteaker, Jacob J. Kennedy, A. Paulovich, 2022, Biopreservation and biobanking.

Gene Regulation and Epigenetic Remodeling in Murine Embryonic Stem Cells by c-Myc

Hisashi Tanaka, R. Eisenman, ChenWei Lin, 2009, PloS one.

Phosphoproteomic analysis of chimeric antigen receptor signaling reveals kinetic and quantitative differences that affect cell function

Jeffrey R. Whiteaker, Uliana J. Voytovich, Jacob J. Kennedy, 2018, Science Signaling.

Multiomic analysis identifies CPT1A as a potential therapeutic target in platinum-refractory, high-grade serous ovarian cancer

Jeffrey R. Whiteaker, Sara R. Savage, Uliana J. Voytovich, 2021, Cell reports. Medicine.

Immobilized Metal Affinity Chromatography Coupled to Multiple Reaction Monitoring Enables Reproducible Quantification of Phospho-signaling*

Jeffrey R. Whiteaker, Uliana J. Voytovich, Jacob J. Kennedy, 2015, Molecular & Cellular Proteomics.

Comparative analyses identify molecular signature of MRI-classified SVZ-associated glioblastoma

Mitchel S. Berger, Chin-Hsing Annie Lin, M. Berger, 2017, Cell cycle.

A highly annotated database of genes associated with platinum resistance in cancer

Sara R. Savage, A. Paulovich, M. Birrer, 2021, Oncogene.

Proteome and transcriptome profiles of a Her2/Neu‐driven mouse model of breast cancer

Yan Liu, Pei Wang, Jeffrey R. Whiteaker, 2011, Proteomics. Clinical applications.

Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins

Pei Wang, Susan E Abbatiello, Henry Rodriguez, 2013, Nature Methods.

Targeted Mass Spectrometry Enables Multiplexed Quantification of Immunomodulatory Proteins in Clinical Biospecimens

Jeffrey R. Whiteaker, Regine M. Schoenherr, Jacob J. Kennedy, 2021, Frontiers in Immunology.

ARTEMIS: A Novel Mass-Spec Platform for HLA-Restricted Self and Disease-Associated Peptide Discovery

Roland K. Strong, Mi-Youn Brusniak, Philip R. Gafken, 2021, Frontiers in Immunology.

Commercially available antibodies can be applied in quantitative multiplexed peptide immunoaffinity enrichment targeted mass spectrometry assays

Jeffrey R. Whiteaker, Regine M. Schoenherr, Uliana J. Voytovich, 2016, Proteomics.

Targeted Mass Spectrometry Enables Quantification of Novel Pharmacodynamic Biomarkers of ATM Kinase Inhibition

Jeffrey R. Whiteaker, Regine M. Schoenherr, Jacob J. Kennedy, 2021, Cancers.

Targeted mass-spectrometry-based assays enable multiplex quantification of receptor tyrosine kinase, MAP kinase, and AKT signaling

Jeffrey R. Whiteaker, Regine M. Schoenherr, Jacob J. Kennedy, 2021, Cell reports methods.

Bioinformatics Original Paper a Suite of Algorithms for the Comprehensive Analysis of Complex Protein Mixtures Using High-resolution Lc-ms

Pei Wang, Jeffrey Whiteaker, Amanda G. Paulovich, 2022 .

A Multiplexed Mass Spectrometry-Based Assay for Robust Quantification of Phosphosignaling in Response to DNA Damage

Jeffrey R. Whiteaker, Regine M. Schoenherr, A. Paulovich, 2018, Radiation Research.

Peptide Immunoaffinity Enrichment and Targeted Mass Spectrometry Enables Multiplex, Quantitative Pharmacodynamic Studies of Phospho-Signaling*

Jeffrey R. Whiteaker, Amanda G Paulovich, Lei Zhao, 2015, Molecular & Cellular Proteomics.

A targeted proteomics–based pipeline for verification of biomarkers in plasma

Pei Wang, Jacob Kennedy, Jeffrey R. Whiteaker, 2011, Nature Biotechnology.

Evaluation of Large Scale Quantitative Proteomic Assay Development Using Peptide Affinity-based Mass Spectrometry*

Susan E Abbatiello, Steven A Carr, Susan E. Abbatiello, 2011, Molecular & Cellular Proteomics.

Multiplexed triage of candidate biomarkers in plasma using internal standard triggered-parallel reaction monitoring mass spectrometry

Jeffrey R. Whiteaker, Lisa A. Jones, A. Paulovich, 2021, bioRxiv.

A multiplexed assay for quantifying immunomodulatory proteins supports correlative studies in immunotherapy clinical trials

Jeffrey R. Whiteaker, Regine M. Schoenherr, Jacob J. Kennedy, 2023, Frontiers in Oncology.

Quantification of Human Epidermal Growth Factor Receptor 2 by Immunopeptide Enrichment and Targeted Mass Spectrometry in Formalin-Fixed Paraffin-Embedded and Frozen Breast Cancer Tissues.

Jeffrey R. Whiteaker, Regine M. Schoenherr, Jacob J. Kennedy, 2021, Clinical chemistry.

Integrative Proteo-genomic Analysis to Construct CNA-protein Regulatory Map in Breast and Ovarian Tumors*

Amanda G. Paulovich, Sung Won Han, Pei Wang, 2019, Molecular & Cellular Proteomics.

Proteogenomic analysis of chemo-refractory high-grade serous ovarian cancer

Jeffrey R. Whiteaker, Sara R. Savage, Uliana J. Voytovich, 2023, Cell.

Bioinformatics Original Paper a Suite of Algorithms for the Comprehensive Analysis of Complex Protein Mixtures Using High-resolution Lc-ms

Jeffrey R. Whiteaker, Damon H. May, Marc Coram, 2022 .

A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS

Jeffrey R. Whiteaker, A. Paulovich, Matthew Fitzgibbon, 2006, Bioinform..