J. Prince

发表

Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping.

E. Marcotte, J. Prince, 2006, Analytical chemistry.

The need for a public proteomics repository

Rong Wang, Edward M Marcotte, John T Prince, 2004, Nature Biotechnology.

A fast coarse filtering method for protein identification by mass spectrometry

Daniel P. Miranker, Rui Mao, Weijia Xu, .

Metabolic-Stress-Induced Rearrangement of the 14-3-3ζ Interactome Promotes Autophagy via a ULK1- and AMPK-Regulated 14-3-3ζ Interaction with Phosphorylated Atg9

Andrew D. Mathis, J. Prince, J. Thompson, 2014, Molecular and Cellular Biology.

Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle.

J. Prince, T. Anthonymuthu, B. Bikman, 2013, The Biochemical journal.

Imbalanced sphingolipid signaling is maintained as a core proponent of a cancerous phenotype in spite of metabolic pressure and epigenetic drift

Jonathon T. Hill, Peter M. Jones, J. C. Price, 2019, Oncotarget.

Isolation and Sequence of Partial cDNA Clones of Human L1: Homology of Human and Rodent L1 in the Cytoplasmic Region

J. Prince, W. Stallcup, J. Harper, 1991, Journal of neurochemistry.

Induction of NILE/L1 glycoprotein during neuronal differentiation of the embryonal carcinoma cell line EC1003.

J. Prince, W. Stallcup, 1991, Differentiation; research in biological diversity.

Free cottontail rabbit papillomavirus DNA persists in warts and carcinomas of infected rabbits and in cells in culture transformed with virus or viral DNA.

J. Prince, W. Phelps, A. Faras, 1983, Virology.

The case of the disappearing drug target.

N. Ahn, J. Prince, 2010, Molecular cell.

Expression of the F84.1 glycoprotein in the spinal cord and cranial nerves of the developing rat.

J. Prince, A. Nishiyama, W. Stallcup, 1992, Brain research. Developmental brain research.

Rubabel: wrapping open Babel with Ruby

Dan Ventura, Robert Smith, John T. Prince, 2013, Journal of Cheminformatics.

Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias.

Rong Wang, Edward M Marcotte, John T Prince, 2005, Genome research.

Whole blood and urine bioactive Hepcidin-25 determination using liquid chromatography mass spectrometry.

J. C. Price, J. Prince, A. Gross, 2017, Analytical biochemistry.

Programmed Cell Death Protein 5 Interacts with the Cytosolic Chaperonin Containing Tailless Complex Polypeptide 1 (CCT) to Regulate β-Tubulin Folding* ♦

Ryan M. Taylor, N. Ahn, J. Prince, 2013, The Journal of Biological Chemistry.

Integrating shotgun proteomics and mRNA expression data to improve protein identification

Rong Wang, Daniel P. Miranker, Zhihua Li, 2009, Bioinform..

The primary structure of NG2, a novel membrane-spanning proteoglycan

J. Prince, S. Johnstone, A. Nishiyama, 1991, The Journal of cell biology.

The Genomes, Proteomes, and Structures of Three Novel Phages That Infect the Bacillus cereus Group and Carry Putative Virulence Factors

Andrew D. Mathis, J. Prince, D. Belnap, 2014, Journal of Virology.

Integrative Data Analysis to Improve Protein Identification in Shotgun Proteomics Experiments Supplementary Notes

Daniel P. Miranker, Smriti R. Ramakrishnan, E. Marcotte, 2009 .

Integration and validation of mass spectrometry proteomics data sets

Edward M. Marcotte, John T. Prince, E. Marcotte, 2008 .

A comprehensive protein–protein interactome for yeast PAS kinase 1 reveals direct inhibition of respiration through the phosphorylation of Cbf1

Andrew D. Mathis, T. D. Hall, J. Prince, 2014, Molecular biology of the cell.

Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view

Andrew D. Mathis, D. Ventura, J. Prince, 2014, BMC Bioinformatics.

Construction, cloning, and expression of synthetic genes encoding spider dragline silk.

D. Kaplan, J. Prince, C M DiGirolamo, 1995, Biochemistry.

Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup

Ryan M. Taylor, J. Prince, P. Shen, 2012, Journal of Virology.

Nephila Clavipes Dragline Silk: Approaches to a Recombinantly Produced Silk Protein

D. Kaplan, J. Prince, K. Senecal, 1993 .

Rubabel: Wrapping OpenBabel with Ruby.

Dan Ventura, Robert Smith, John T. Prince, 2013 .

Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal

Ryan M. Taylor, J. Prince, Robert Smith, 2015, BMC Bioinformatics.

LC-MS alignment in theory and practice: a comprehensive algorithmic review

Dan Ventura, Robert Smith, John T. Prince, 2013, Briefings Bioinform..

JAMSS: proteomics mass spectrometry simulation in Java

Robert Smith, John T. Prince, J. Prince, 2015, Bioinform..

Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view

Dan Ventura, Robert Smith, Andrew D. Mathis, 2014, BMC Bioinformatics.

Mspire-Simulator: LC-MS shotgun proteomic simulator for creating realistic gold standard data.

Rob Smith, Nozomu Okuda, Ryan M. Taylor, 2013, Journal of proteome research.

Yersinia pseudotuberculosis BarA-UvrY Two-Component Regulatory System Represses Biofilms via CsrB

J. Prince, D. Erickson, Jeffrey K Schachterle, 2018, Front. Cell. Infect. Microbiol..

Insulin Increases Ceramide Synthesis in Skeletal Muscle

J. Prince, B. Bikman, Trevor S. Tippetts, 2014, Journal of diabetes research.

Structures of the Gβ-CCT and PhLP1–Gβ-CCT complexes reveal a mechanism for G-protein β-subunit folding and Gβγ dimer assembly

Andrew D. Mathis, S. Franklin, J. Prince, 2015, Proceedings of the National Academy of Sciences.

Metriculator: quality assessment for mass spectrometry-based proteomics

John T. Prince, Ryan M. Taylor, Jamison Dance, 2013, Bioinform..

Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection

Ralf J. O. Torgrip, Robert Smith, Ralf Tautenhahn, 2014, Bioinform..

AICAR inhibits ceramide biosynthesis in skeletal muscle

J. Prince, T. Anthonymuthu, B. Bikman, 2012, Diabetology & Metabolic Syndrome.

Automated structural classification of lipids by machine learning

Michael Porter, John T. Prince, Ryan M. Taylor, 2015, Bioinform..

Controlling for confounding variables in MS-omics protocol: why modularity matters

Dan Ventura, Robert Smith, John T. Prince, 2014, Briefings Bioinform..

Novel algorithms and the benefits of comparative validation

Dan Ventura, Robert Smith, John T. Prince, 2013, Bioinform..

Molecular cloning of NILE glycoprotein and evidence for its continued expression in mature rat CNS

J. Prince, W. Stallcup, P. Healy, 1991, Journal of neuroscience research.

Probabilistic Generation of Mass Spectrometry Molecular Abundance Variance for Case and Control Replicates.

Rob Smith, John T Prince, J. Prince, 2017, Journal of proteome research.

mspire: mass spectrometry proteomics in Ruby

Edward M. Marcotte, John T. Prince, E. Marcotte, 2008, Bioinform..

Statistical agglomeration: peak summarization for direct infusion lipidomics

Dan Ventura, Robert Smith, John T. Prince, 2013, Bioinform..

Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle.

J. Prince, T. Anthonymuthu, B. Bikman, 2013, The Biochemical journal.