Kees-Jan Françoijs

发表

Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis.

H. Stunnenberg, S. Mandrup, R. Nielsen, 2008, Genes & development.

Coactivation of GR and NFKB alters the repertoire of their binding sites and target genes.

H. Stunnenberg, P. Moulos, Kees-Jan Françoijs, 2011, Genome research.

High-resolution analysis of epigenetic changes associated with X inactivation.

Edith Heard, Neil Brockdorff, Hendrik Marks, 2009, Genome research.

A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos.

H. Stunnenberg, S. V. van Heeringen, G. Veenstra, 2009, Developmental cell.

Nitrite-driven anaerobic methane oxidation by oxygenic bacteria

Ming L. Wu, E. Pelletier, D. Paslier, 2010, Nature.

H2A.Z Demarcates Intergenic Regions of the Plasmodium falciparum Epigenome That Are Dynamically Marked by H3K9ac and H3K4me3

H. Stunnenberg, A. H. Smits, T. Gilberger, 2010, PLoS pathogens.

The genome of the tegu lizard Salvator merianae: combining Illumina, PacBio, and optical mapping data to generate a highly contiguous assembly

K. Sameith, M. Hiller, Kees-Jan Françoijs, 2018, GigaScience.

Molecular mechanism of anaerobic ammonium oxidation

Jolein Gloerich, Mike S. M. Jetten, Marc Strous, 2011, Nature.

SMRT long reads and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica)

David Stephen Horner, Nicola Saino, Matteo Chiara, 2018, bioRxiv.

SMRT long-read sequencing and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica)

Kees-Jan Françoijs, M. Chiara, D. Horner, 2018 .

De novo transcriptome characterization and development of genomic tools for Scabiosa columbaria L. using next‐generation sequencing techniques

N. J. Ouborg, Kees-Jan Françoijs, E. Janssen-Megens, 2011, Molecular ecology resources.

Metagenome Analysis of a Complex Community Reveals the Metabolic Blueprint of Anammox Bacterium “Candidatus Jettenia asiatica”

Kees-Jan Françoijs, M. Jetten, Z. Quan, 2012, Front. Microbio..

Discovery and population genomics of structural variation in a songbird genus

F. Sedlazeck, A. Catalán, Kees-Jan Françoijs, 2020, Nature Communications.

PML-RARalpha/RXR Alters the Epigenetic Landscape in Acute Promyelocytic Leukemia.

H. Stunnenberg, J. Martens, L. Altucci, 2010, Cancer cell.

Chromatin accessibility, p300, and histone acetylation define PML-RARα and AML1-ETO binding sites in acute myeloid leukemia.

Fiona G. G. Nielsen, M. Huynen, H. Stunnenberg, 2012, Blood.

Multiple hybrid de novo genome assembly of finger millet, an orphan allotetraploid crop

R. Schlapbach, J. Baeten, Kees-Jan Françoijs, 2017, DNA research : an international journal for rapid publication of reports on genes and genomes.

Nitrosomonas eutropha C91 Long-Term Continuous Cultures of Global Gene and Protein Expression in Effects of Nitrogen Dioxide and Anoxia on

Kees-Jan Françoijs, M. Klotz, M. Jetten, 2012 .

Effect of oxygen on the anaerobic methanotroph 'Candidatus Methylomirabilis oxyfera': kinetic and transcriptional analysis.

Ming L. Wu, H. Stunnenberg, M. Strous, 2012, Environmental microbiology.

Natural Disulfide Bond-disrupted Mutants of AVR4 of the Tomato Pathogen Cladosporium fulvum Are Sensitive to Proteolysis, Circumvent Cf-4-mediated Resistance, but Retain Their Chitin Binding Ability*

Kees-Jan Françoijs, J. Vervoort, P. D. de Wit, 2003, Journal of Biological Chemistry.

Linear amplification for deep sequencing

Kees-Jan Françoijs, H. Stunnenberg, Kees-Jan Françoijs, 2011, Nature Protocols.

The PAS fold. A redefinition of the PAS domain based upon structural prediction.

Ray Dixon, Jacques Vervoort, Marco H Hefti, 2004, European journal of biochemistry.

Author Correction: Discovery and population genomics of structural variation in a songbird genus

F. Sedlazeck, A. Catalán, Kees-Jan Françoijs, 2020, Nature Communications.

The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’ illustrates the versatility of this globally important nitrogen cycle bacterium

S. Tringe, R. Amann, H. Stunnenberg, 2013, Environmental microbiology.

Autotrophic Methanotrophy in Verrucomicrobia: Methylacidiphilum fumariolicumSolV Uses the Calvin-Benson-Bassham Cycle for Carbon Dioxide Fixation

Mike S. M. Jetten, Adam Wieczorek, H. Stunnenberg, 2011, Journal of bacteriology.

Effects of Nitrogen Dioxide and Anoxia on Global Gene and Protein Expression in Long-Term Continuous Cultures of Nitrosomonas eutropha C91

Kees-Jan Françoijs, M. Klotz, M. Jetten, 2012, Applied and Environmental Microbiology.

Context-selective death of acute myeloid leukemia cells triggered by the novel hybrid retinoid-HDAC inhibitor MC2392.

H. Stunnenberg, J. Martens, L. Altucci, 2014, Cancer Research.

Plasmodium falciparum centromeres display a unique epigenetic makeup and cluster prior to and during schizogony

H. Stunnenberg, A. H. Smits, A. Cowman, 2012, Cellular microbiology.

Streptococcus pneumoniae Folate Biosynthesis Responds to Environmental CO2 Levels

Aldert L. Zomer, Hendrik G. Stunnenberg, Kees-Jan Françoijs, 2013, Journal of bacteriology.

H2A.Z/H2B.Z double-variant nucleosomes inhabit the AT-rich promoter regions of the Plasmodium falciparum genome

H. Stunnenberg, A. H. Smits, T. Gilberger, 2013, Molecular microbiology.

Draft Genome Sequence of the Volcano-Inhabiting Thermoacidophilic Methanotroph Methylacidiphilum fumariolicum Strain SolV

C. Médigue, H. Stunnenberg, S. Vuilleumier, 2012, Journal of bacteriology.

FACIL: Fast and Accurate Genetic Code Inference and Logo

M. Huynen, H. Stunnenberg, M. Strous, 2011, Bioinform..

The population genomics of structural variation in a songbird genus

Fritz J. Sedlazeck, Alexander Suh, Ignas Bunikis, 2019, bioRxiv.

Design and structural analysis of a thermostable nine-β-stranded immunoglobulin scaffold

Kees-Jan Françoijs, J. Vervoort, H. Ippel, 2010 .