Y. Chebaro

发表

Replica exchange molecular dynamics simulations of coarse-grained proteins in implicit solvent.

N. Mousseau, P. Derreumaux, Y. Chebaro, 2009, The journal of physical chemistry. B.

The coarse-grained OPEP force field for non-amyloid and amyloid proteins.

Samuela Pasquali, Philippe Derreumaux, Yassmine Chebaro, 2012, The journal of physical chemistry. B.

Intrinsically Disordered Energy Landscapes

A. J. Ballard, D. Wales, Debayan Chakraborty, 2015, Scientific Reports.

BpForms: a toolkit for concretely describing modified DNA, RNA and proteins

Jonathan R. Karr, Paul F. Lang, Y. Chebaro, 2019 .

BpForms: a toolkit for concretely describing modified DNA, RNA and proteins

Jonathan R. Karr, Paul F. Lang, Y. Chebaro, 2019 .

A structural signature motif enlightens the origin and diversification of nuclear receptors

Gabriel V. Markov, V. Laudet, D. Moras, 2020, bioRxiv.

The OPEP protein model: from single molecules, amyloid formation, crowding and hydrodynamics to DNA/RNA systems.

Marc Baaden, Samuela Pasquali, Maria Kalimeri, 2014, Chemical Society reviews.

Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation.

N. Mousseau, P. Derreumaux, Y. Chebaro, 2009, The journal of physical chemistry. B.

High-Risk Mucosal Human Papillomavirus 16 (HPV16) E6 Protein and Cutaneous HPV5 and HPV8 E6 Proteins Employ Distinct Strategies To Interfere with Interferon Regulatory Factor 3-Mediated Beta Interferon Expression

P. Peixoto, D. Altschuh, Y. Chebaro, 2022, Journal of virology.

A multifunnel energy landscape encodes the competing α-helix and β-hairpin conformations for a designed peptide.

D. Wales, Debayan Chakraborty, Y. Chebaro, 2019, Physical chemistry chemical physics : PCCP.

BpForms and BcForms: Tools for concretely describing non-canonical polymers and complexes to facilitate comprehensive biochemical networks

Darren A. Natale, Jonathan R. Karr, John A. P. Sekar, 2019 .

Vitamin D Analogs Bearing C-20 Modifications Stabilize the Agonistic Conformation of Non-Responsive Vitamin D Receptor Variants

D. Metzger, N. Rochel, Y. Chebaro, 2022, International journal of molecular sciences.

Crucial role of nonspecific interactions in amyloid nucleation

Daan Frenkel, Tuomas P J Knowles, Anđela Šarić, 2014, Proceedings of the National Academy of Sciences.

BpForms and BcForms: a toolkit for concretely describing non-canonical polymers and complexes to facilitate global biochemical networks

Jonathan R. Karr, Paul F. Lang, D. Natale, 2019, Genome Biology.

Structural basis for the accommodation of bis- and tris-aromatic derivatives in vitamin D nuclear receptor.

D. Moras, Yoshiteru Sato, N. Rochel, 2012, Journal of medicinal chemistry.

NR3E receptors in cnidarians: A new family of steroid receptor relatives extends the possible mechanisms for ligand binding

Gabriel V. Markov, V. Laudet, Y. Chebaro, 2018, The Journal of Steroid Biochemistry and Molecular Biology.

Modulation of RXR-DNA complex assembly by DNA context

N. Rochel, Y. Chebaro, B. Kieffer, 2019, Molecular and Cellular Endocrinology.

Allostery in Its Many Disguises: From Theory to Applications.

Ruth Nussinov, Ivet Bahar, Dima Kozakov, 2019, Structure.

The molecular mechanisms underlying the ERα-36-mediated signaling in breast cancer

N. Rochel, Y. Chebaro, I. Treilleux, 2016, Oncogene.

The Asymmetric Binding of PGC-1α to the ERRα and ERRγ Nuclear Receptor Homodimers Involves a Similar Recognition Mechanism

D. Svergun, D. Moras, Y. Chebaro, 2013, PloS one.

Structures of Aβ17-42 trimers in isolation and with five small-molecule drugs using a hierarchical computational procedure.

N. Mousseau, P. Derreumaux, Y. Chebaro, 2012, The journal of physical chemistry. B.

Substitutions at residue 211 in the prion protein drive a switch between CJD and GSS syndrome, a new mechanism governing inherited neurodegenerative disorders.

J. Hauw, P. Derreumaux, J. Laplanche, 2012, Human molecular genetics.

Structural Basis for DNA Gyrase Interaction with Coumermycin A1.

V. Lamour, Y. Chebaro, N. Potier, 2019, Journal of medicinal chemistry.

Allosteric Regulation in the Ligand Binding Domain of Retinoic Acid Receptorγ

Roland H. Stote, Annick Dejaegere, Yassmine Chebaro, 2017, PloS one.

Phosphorylation of the Retinoic Acid Receptor Alpha Induces a Mechanical Allosteric Regulation and Changes in Internal Dynamics

Roland H. Stote, Annick Dejaegere, Yassmine Chebaro, 2013, PLoS Comput. Biol..

Protein Structural Statistics with PSS

Roland H. Stote, Annick Dejaegere, Thomas Gaillard, 2013, J. Chem. Inf. Model..

The conversion of helix H2 to beta-sheet is accelerated in the monomer and dimer of the prion protein upon T183A mutation.

P. Derreumaux, Y. Chebaro, 2009, The journal of physical chemistry. B.

Targeting the Two Oncogenic Functional Sites of the HPV E6 Oncoprotein with a High-Affinity Bivalent Ligand**

Y. Jacob, Y. Chebaro, M. Masson, 2015, Angewandte Chemie.

Targeting the early steps of Aβ16–22 protofibril disassembly by N‐methylated inhibitors: A numerical study

P. Derreumaux, Y. Chebaro, 2009, Proteins.

Structures of Aβ17-42 trimers in isolation and with five small-molecule drugs using a hierarchical computational procedure.

N. Mousseau, P. Derreumaux, Y. Chebaro, 2012, The journal of physical chemistry. B.