G. Koudelka

发表

Effect of non-contacted bases on the affinity of 434 operator for 434 repressor and Cro

S. Harrison, M. Ptashne, G. Koudelka, 1987, Nature.

Transcriptional and Translational Inhibitors Block SOS Response and Shiga Toxin Expression in Enterohemorrhagic Escherichia coli

U. Dobrindt, G. Koudelka, M. Berger, 2019, Scientific Reports.

Shiga Toxin: Expression, Distribution, and Its Role in the Environment

G. Koudelka, Steven A. Mauro, 2011, Toxins.

Small molecule MMRi62 targets MDM4 for degradation and induces leukemic cell apoptosis regardless of p53 status

J. Bargonetti, G. Koudelka, F. Hernandez-Ilizaliturri, 2022, Frontiers in Oncology.

Dynamic Phosphorylation Regulates Eukaryotic Translation Initiation Factor 4A Activity During the Cell Cycle

Sarah E. Walker, G. Koudelka, Ansuman Sahoo, 2022, bioRxiv.

Carriage of Shiga toxin phage profoundly affects Escherichia coli gene expression and carbon source utilization

A. Mellmann, U. Dobrindt, G. Koudelka, 2019, BMC Genomics.

A Robust One-Step Recombineering System for Enterohemorrhagic Escherichia coli

A. Mellmann, U. Dobrindt, G. Koudelka, 2022, Microorganisms.

Evolution of STEC virulence: Insights from the antipredator activities of Shiga toxin producing E. coli.

G. Koudelka, Jason W. Arnold, Dolonchapa Chakraborty, 2018, International journal of medical microbiology : IJMM.

Molecular Mechanisms Governing “Hair-Trigger” Induction of Shiga Toxin-Encoding Prophages

G. Koudelka, Eric Clark, Steven A. Mauro, 2018, Viruses.

The Trojan Horse of the microbiological arms race: phage-encoded toxins as a defence against eukaryotic predators.

G. Koudelka, Jason W. Arnold, 2014, Environmental microbiology.

Differential recognition of OR1 and OR3 by bacteriophage 434 repressor and Cro.

G. Koudelka, C. Y. Lam, 1993, The Journal of biological chemistry.

Sequence recognition of DNA by protein-induced conformational transitions.

Loren Dean Williams, Gerald B Koudelka, Srividya Mohan, 2010, Journal of molecular biology.

Specific minor groove solvation is a crucial determinant of DNA binding site recognition

G. Koudelka, L. Williams, L. Harris, 2014, Nucleic acids research.

Indirect readout of DNA sequence by p22 repressor: roles of DNA and protein functional groups in modulating DNA conformation.

G. Koudelka, L. Williams, Derrick Watkins, 2013, Journal of molecular biology.

Determinants of Bacteriophage 933W Repressor DNA Binding Specificity

G. Koudelka, Tammy J. Bullwinkle, R. Rosati, 2012, PloS one.

Protein: Feeling the groove of DNA

Gerald B. Koudelka, Loren Dean Williams, Derrick Watkins, 2011 .

P22 c2 repressor-operator complex: mechanisms of direct and indirect readout.

G. Koudelka, L. Williams, Chiaolong Hsiao, 2008, Biochemistry.

Monovalent cations regulate DNA sequence recognition by 434 repressor.

G. Koudelka, Steven A. Mauro, 2004, Journal of molecular biology.

Carboxyl-terminal domain dimer interface mutant 434 repressors have altered dimerization and DNA binding specificities.

G. Koudelka, A. Donner, K. Paa, 1998, Journal of molecular biology.

Recognition of Nonconserved Bases in the P22 Operator by P22 Repressor Requires Specific Interactions between Repressor and Conserved Bases*

G. Koudelka, S. Hilchey, Lin Wu, 1997, The Journal of Biological Chemistry.

Dimerization specificity of P22 and 434 repressors is determined by multiple polypeptide segments

G. Koudelka, A. Donner, P. Carlson, 1997, Journal of bacteriology.

DNA-based Loss of Specificity Mutations

G. Koudelka, S. Hilchey, 1997, The Journal of Biological Chemistry.

Sequence-dependent differences in DNA structure influence the affinity of P22 operator for P22 repressor.

G. Koudelka, L. Wu, 1993, The Journal of biological chemistry.

Non-contacted bases affect the affinity of synthetic P22 operators for P22 repressor.

G B Koudelka, L Wu, A Vertino, 1992, The Journal of biological chemistry.

DNA twisting and the effects of non-contacted bases on affinity of 434 operator for 434 represser

Paul Carlson, Gerald B. Koudelka, G. Koudelka, 1992, Nature.

Effects of a single reduction-reoxidation cycle on the kinetics of copper reductions in Rhus laccase

G. Koudelka, F. B. Hansen, R. Noble, 1984 .

The Role of the Minor Groove Substituents in Indirect Readout of DNA Sequence by 434 Repressor*

Steven A Mauro, Gerald B Koudelka, G. Koudelka, 2003, The Journal of Biological Chemistry.

DNA twisting and the affinity of bacteriophage 434 operator for bacteriophage 434 repressor.

G B Koudelka, P Harbury, S C Harrison, 1988, Proceedings of the National Academy of Sciences of the United States of America.

The Oligosaccharide Region of LPS Governs Predation of E. coli by the Bacterivorous Protist, Acanthamoeba castellanii

Y. Liu, G. Koudelka, 2023, Microbiology spectrum.

Determinants that govern the recognition and uptake of Escherichia coli O157 : H7 by Acanthamoeba castellanii

G. Koudelka, Jason W. Arnold, D. Spacht, 2016, Cellular microbiology.

Cooperative DNA binding by a splice variant of the transcription factor ETS1 that lacks autoinhibition

G. Koudelka, D. Samorodnitsky, C. Szyjka, 2016, bioRxiv.

Mechanisms that Determine the Differential Stability of Stx+ and Stx− Lysogens

G. Koudelka, Dolonchapa Chakraborty, Michael P. Colon, 2016, Toxins.

Purification and Characterization of the Repressor of the Shiga Toxin-Encoding Bacteriophage 933W: DNA Binding, Gene Regulation, and Autocleavage

G. Koudelka, A. Koudelka, L. Hufnagel, 2004, Journal of bacteriology.

The Preferred Substrate for RecA-Mediated Cleavage of Bacteriophage 434 Repressor Is the DNA-Bound Dimer

G. Koudelka, David R. Pawlowski, 2004, Journal of bacteriology.

Bacteriophage 434 Hex Protein Prevents RecA-Mediated Repressor Autocleavage

G. Koudelka, Michael P. Colon, Paul Shkilnyj, 2013, Viruses.

Entry and Killing of Tetrahymena thermophila by Bacterially Produced Shiga Toxin

G. Koudelka, Gino Stolfa, 2012, mBio.

The Microcosm Mediates the Persistence of Shiga Toxin-Producing Escherichia coli in Freshwater Ecosystems

Kyle Lindsay, Steven A Mauro, Hannah Opalko, 2013, Applied and Environmental Microbiology.

Indirect readout of DNA sequence by proteins: the roles of DNA sequence-dependent intrinsic and extrinsic forces.

Steven A Mauro, Gerald B Koudelka, G. Koudelka, 2006, Progress in nucleic acid research and molecular biology.

Repression of transcription initiation at 434 P(R) by 434 repressor: effects on transition of a closed to an open promoter complex.

G. Koudelka, J. Xu, 2001, Journal of molecular biology.

Mutually Exclusive Utilization of PRand PRM Promoters in Bacteriophage 434 OR

G. Koudelka, Jian Xu, 2000, Journal of bacteriology.

Indirect Effects of DNA Sequence on Transcriptional Activation by Prokaryotic DNA Binding Proteins

G. Koudelka, J. Xu, S. Hilchey, 1997 .

Fluoride effects on the activity of Rhus laccase and the catalytic mechanism under steady-state conditions.

G. Koudelka, M. J. Ettinger, 1988, Journal of Biological Chemistry.

Solvent isotope effects and the pH dependence of laccase activity under steady-state conditions.

G B Koudelka, G. Koudelka, F B Hansen, 1985, The Journal of biological chemistry.

Cooperativity: Action at a distance in a classic system

G. Koudelka, 2000, Current Biology.

Identification of Hylemonella gracilis as an Antagonist of Yersinia pestis Persistence

G. Koudelka, D. Metzger, R. Karalus, 2011 .

Cheating, facilitation and cooperation regulate the effectiveness of phage‐encoded exotoxins as antipredator molecules

G. Koudelka, Iqbal Aijaz, 2018, MicrobiologyOpen.

Characterization of GPIT-1 and GPIT-2, two auxiliary components of the Neurospora crassa GPI transamidase complex

G. Koudelka, S. Free, R. Matsumoto, 2009, Mycologia.

The Lysis-Lysogeny Decision of Bacteriophage 933W: a 933W Repressor-Mediated Long-Distance Loop Has No Role in Regulating 933W PRM Activity

G. Koudelka, Tammy J. Bullwinkle, 2011, Journal of bacteriology.

Recognition of DNA sequences by the repressor of bacteriophage 434.

S. Subbiah, S. Harrison, A. Mondragón, 1988, Biophysical Chemistry.

DNA sequence requirements for the activation of 434 P(RM) transcription by 434 repressor.

G. Koudelka, J. Xu, 2000, DNA and cell biology.

DNA-based Positive Control Mutants in the Binding Site Sequence of 434 Repressor*

G. Koudelka, Jian Xu, 1998, The Journal of Biological Chemistry.

DNA-induced conformational changes in bacteriophage 434 repressor.

G. Koudelka, F. Bright, C. M. Ingersoll, 1999, Journal of molecular biology.

Indirect Effects of DNA Sequence on 434 Repressor-DNA Interactions

G. Koudelka, 1993 .

Effect of Salt Shock on Stability of λimm434 Lysogens

G. Koudelka, Paul Shkilnyj, 2007 .

Shiga Toxin as a Bacterial Defense against a Eukaryotic Predator, Tetrahymena thermophila

G. Koudelka, W. Lainhart, Gino Stolfa, 2009, Journal of bacteriology.

Function-Based Selection and Characterization of Base-Pair Polymorphisms in a Promoter of Escherichia coli RNA Polymerase-ς70

B. C. McCabe, G. Koudelka, Jian Xu, 2001, Journal of bacteriology.

Recognition of DNA structure by 434 repressor.

G. Koudelka, 1998, Nucleic acids research.

Expression, purification, and functional characterization of the carboxyl-terminal domain fragment of bacteriophage 434 repressor

G. Koudelka, P. Carlson, 1994, Journal of bacteriology.

The Bacteriophage 434 Repressor Dimer Preferentially Undergoes Autoproteolysis by an Intramolecular Mechanism

B. C. McCabe, G. Koudelka, David R. Pawlowski, 2005, Journal of bacteriology.

Carriage of Shiga toxin phage profoundly affects Escherichia coli gene expression and carbon source utilization

A. Mellmann, U. Dobrindt, G. Koudelka, 2019, BMC Genomics.

Bending of synthetic bacteriophage 434 operators by bacteriophage 434 proteins.

G. Koudelka, 1991, Nucleic Acids Research.

Role of the N- and C- Terminal Dimer Interfaces of 434 Repressor in Recognizing Sequence-Dependent DNA Structure

G. Koudelka, A. Donner, M. Ciubotaru, 2000, Journal of biomolecular structure & dynamics.

How 434 repressor discriminates between OR1 and OR3. The influence of contacted and noncontacted base pairs.

G. Koudelka, A. Bell, 1995, The Journal of biological chemistry.

Effect of Salt Shock on the Stability of λ imm 434 Lysogens ( Running Title : Salt induction of λ imm 434 lysogens )

G. Koudelka, Paul Shkilnyj, 2007 .

Recognition of DNA sequences by the repressor and Cro proteins of bacteriophage 434

Alfonso Mondragón, Cynthia Wolberger, S. Subbiah, 1988 .

O-Polysaccharides of LPS Modulate E. coli Uptake by Acanthamoeba castellanii

G. Koudelka, Ying Liu, 2023, Microorganisms.

A Role for Autoinhibition in Preventing Dimerization of the Transcription Factor ETS1*

G. Koudelka, D. Samorodnitsky, C. Szyjka, 2015, The Journal of Biological Chemistry.

Tetrahymena phagocytic vesicles as ecological micro-niches of phage transfer.

G. Koudelka, Iqbal Aijaz, 2017, FEMS microbiology ecology.

The Shiga toxin (Stx)-Phage Encoded Ribosomal RNA Methyltransferase Regulates Stx-producing Escherichia coli (STEC) Virulence by Blocking Stx-Mediated Inactivation of Bacterial Ribosomes

G. Koudelka, Chen Gong, 2023, bioRxiv.

A prophage encoded ribosomal RNA methyltransferase regulates the virulence of Shiga-toxin-producing Escherichia coli (STEC)

G. Koudelka, Dolonchapa Chakraborty, Chen Gong, 2023, Nucleic acids research.