A. Balaeff

发表

Structural dynamics of the lac repressor-DNA complex revealed by a multiscale simulation.

K. Schulten, E. Villa, A. Balaeff, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Structural Basis for Cooperative Dna Binding by Cap and Lac Repressor Each Hand Binds with a High Specificity to a 21 Bp Opera- Tor Dna (lewis Et Test Our Predictions and Further Advance the Study Of

K. Schulten, L. Mahadevan, A. Balaeff, 2022 .

Modelling DNA loops using continuum and statistical mechanics One contribution of 16 to a Theme ‘The mechanics of DNA’

K. Schulten, L. Mahadevan, A. Balaeff, 2004, Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

Role of nucleobase energetics and nucleobase interactions in single-stranded peptide nucleic acid charge transfer.

Ravindra Venkatramani, Shahar Keinan, David N Beratan, 2009, Journal of the American Chemical Society.

B-DNA to zip-DNA: simulating a DNA transition to a novel structure with enhanced charge-transport characteristics.

D. Beratan, A. Balaeff, S. Craig, 2011, The journal of physical chemistry. A.

DNA sequencing by hybridization to oligonucleotide matrix. Calculation of continuous stacking hybridization efficiency.

A. A. Chernyi, Lysov YuP, A. Mirzabekov, 1994, Journal of biomolecular structure & dynamics.

Biological charge transfer via flickering resonance

D. Beratan, A. Balaeff, S. Skourtis, 2014, Proceedings of the National Academy of Sciences.

Charge splitters and charge transport junctions based on guanine quadruplexes

N. Seeman, Yuyuan Tian, D. Beratan, 2018, Nature Nanotechnology.

DNA charge transport: Moving beyond 1D

D. Beratan, A. Balaeff, Peng Zhang, 2016 .

Nucleic Acid Charge Transfer: Black, White and Gray.

D. Beratan, A. Balaeff, R. Venkatramani, 2011, Coordination chemistry reviews.

Computational Investigations of Biological Nanosystems

Klaus Schulten, L Mahadevan, Alexander Balaeff, 2000 .

Multiscale Method for Simulating Protein-DNA Complexes

Klaus Schulten, L. Mahadevan, Elizabeth Villa, 2004, Multiscale Model. Simul..

PNA versus DNA: effects of structural fluctuations on electronic structure and hole-transport mechanisms.

Ravindra Venkatramani, Shahar Keinan, David N Beratan, 2008, Journal of the American Chemical Society.

Steering electrons on moving pathways.

Ravindra Venkatramani, Dequan Xiao, Shahar Keinan, 2009, Accounts of chemical research.

Elastic Rod Model of a DNA Loop in the Lac Operon

Klaus Schulten, Lakshminarayanan Mahadevan, Alexander Balaeff, 1999 .

Effect of backbone flexibility on charge transfer rates in peptide nucleic acid duplexes.

D. Ly, D. Beratan, D. Waldeck, 2012, Journal of the American Chemical Society.

Nonequilibrium Hybridization Enables Discrimination of a Point Mutation within 5-40 °C.

D. Kolpashchikov, J. Hooyberghs, A. Balaeff, 2016, Journal of the American Chemical Society.

Two-color spectroscopy of UV excited ssDNA complex with a single-wall nanotube photoluminescence probe: Fast relaxation by nucleobase autoionization mechanism

M. Blades, M. Zheng, A. Balaeff, 2015, Nano Research.

Solution structure of a peptide nucleic acid duplex from NMR data: features and limitations.

R. Gil, D. Beratan, A. Balaeff, 2008, Journal of the American Chemical Society.

Evidence for a near-resonant charge transfer mechanism for double-stranded peptide nucleic acid.

D. Beratan, D. Waldeck, A. Balaeff, 2011, Journal of the American Chemical Society.

Cations Modulate Actin Bundle Mechanics, Assembly Dynamics, and Structure.

A. Balaeff, Hyeran Kang, J. Hyun, 2018, The journal of physical chemistry. B.

Steering Electrons on Moving Pathways

David N. Beratan, Ravindra Venkatramani, Dequan Xiao, 2010 .

Electronic Structure of Self-Assembled Peptide Nucleic Acid Thin Films

D. Beratan, D. Waldeck, A. Balaeff, 2011 .

Structure prediction of a complex between the chromosomal protein HMG‐D and DNA

K. Schulten, A. Balaeff, M. Churchill, 1998, Proteins.

Structural basis for cooperative DNA binding by CAP and lac repressor.

K. Schulten, A. Balaeff, L. Mahadevan, 2004, Structure.

PNA versus DNA: effects of structural fluctuations on electronic structure and hole-transport mechanisms.

D. Beratan, A. Balaeff, R. Venkatramani, 2008, Journal of the American Chemical Society.