Beat Vögeli

发表

Limits on variations in protein backbone dynamics from precise measurements of scalar couplings.

A. Bax, A. Grishaev, Jinfa Ying, 2007, Journal of the American Chemical Society.

The nuclear Overhauser effect from a quantitative perspective.

Beat Vögeli, Beat Vögeli, 2014, Progress in nuclear magnetic resonance spectroscopy.

Detection of Correlated Protein Backbone and Side‐Chain Angle Fluctuations

Beat Vögeli, R. B. Fenwick, R. Bryn Fenwick, 2017, Chembiochem : a European journal of chemical biology.

Structure and dynamics of a molten globular enzyme

Donald Hilvert, Konstantin Pervushin, Beat Vögeli, 2007, Nature Structural &Molecular Biology.

Extending the Applicability of Exact Nuclear Overhauser Enhancements to Large Proteins and RNA

Morkos A. Henen, P. Güntert, Beat Vögeli, 2018, Chembiochem : a European journal of chemical biology.

Unexpected Dynamics in the UUCG RNA Tetraloop

Sandro Bottaro, K. Lindorff-Larsen, M. Parrinello, 2019, bioRxiv.

Unexpected Dynamics in the UUCG RNA Tetraloop

Sandro Bottaro, K. Lindorff-Larsen, M. Parrinello, 2019, bioRxiv.

Towards structure and dynamics of large and dynamically disordered biomacromolecules: New methods in solution NMR spectroscopy

Beat Vögeli, 2005 .

Integrating NMR and simulations reveals motions in the UUCG tetraloop

Sandro Bottaro, K. Lindorff-Larsen, M. Parrinello, 2020, Nucleic acids research.

Integrating NMR and simulations reveals motions in the UUCG tetraloop

Sandro Bottaro, K. Lindorff-Larsen, M. Parrinello, 2019, Nucleic acids research.

Reconstruction of Coupled Intra- and Interdomain Protein Motion from Nuclear and Electron Magnetic Resonance.

Morkos A. Henen, Beat Vögeli, N. Sgourakis, 2021, Journal of the American Chemical Society.

Protein allostery at atomic resolution.

R. Riek, P. Güntert, Beat Vögeli, 2020, Angewandte Chemie.

Longitudinal (1)H relaxation optimization in TROSY NMR spectroscopy.

Beat Vögeli, A. Eletsky, K. Pervushin, 2002, Journal of the American Chemical Society.

High-resolution small RNA structures from exact nuclear Overhauser enhancement measurements without additional restraints

Morkos A. Henen, P. Güntert, Beat Vögeli, 2018, Communications Biology.

Stereospecific assignments in proteins using exact NOEs

R. Riek, P. Güntert, Beat Vögeli, 2013, Journal of Biomolecular NMR.

How uniform is the peptide plane geometry? A high-accuracy NMR study of dipolar Cα–C′/HN–N cross-correlated relaxation

Beat Vögeli, 2011, Journal of biomolecular NMR.

On the use of residual dipolar couplings in multi-state structure calculation of two-domain proteins.

Morkos A. Henen, Beat Vögeli, M. Henen, 2021, Magnetic Resonance Letters.

Activity and A ﬃ nity of Pin1 Variants

Morkos A. Henen, Beat Vögeli, M. Henen, 2019 .

Advances in the exact nuclear Overhauser effect 2018-2022.

Morkos A. Henen, Beat Vögeli, M. Henen, 2022, Methods.

Promiscuity of response regulators for thioredoxin steers bacterial virulence

Morkos A. Henen, Beat Vögeli, M. Henen, 2022, Nature Communications.

Beat Vögeli, 2017, Journal of biomolecular NMR.

Ligand-specific conformational change drives interdomain allostery in Pin1

Morkos A. Henen, Beat Vögeli, G. Jeschke, 2021, Nature Communications.

Backbone and side-chain chemical shift assignments of full-length, apo, human Pin1, a phosphoprotein regulator with interdomain allostery

Jeffrey W. Peng, Morkos A. Henen, Beat Vögeli, 2018, Biomolecular NMR Assignments.

Solution NMR backbone assignments of disordered Olduvai protein domain CON1 employing Hα-detected experiments

Morkos A. Henen, J. Sikela, Beat Vögeli, 2022, Biomolecular NMR Assignments.

Structure and Formation of Z-DNA and Z-RNA

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2023, Molecules.

Temperature dependence of 1HN-1HN distances in ubiquitin as studied by exact measurements of NOEs.

Roland Riek, Beat Vögeli, R. Riek, 2011, The journal of physical chemistry. B.

Probabilistic Determination of Native State Ensembles of Proteins.

Kresten Lindorff-Larsen, Wouter Boomsma, Jesper Ferkinghoff-Borg, 2014, Journal of chemical theory and computation.

Interference between transverse cross-correlated relaxation and longitudinal relaxation affects apparent J-coupling and transverse cross-correlated relaxation

G. Clore, Beat Vögeli, K. Hu, 2006 .

Complementarity and congruence between exact NOEs and traditional NMR probes for spatial decoding of protein dynamics.

Simon Olsson, Peter Güntert, Roland Riek, 2015, Journal of structural biology.

Spatial elucidation of motion in proteins by ensemble-based structure calculation using exact NOEs

Peter Güntert, Sina Kazemi, Roland Riek, 2012, Nature Structural &Molecular Biology.

Quantitative determination of NOE rates in perdeuterated and protonated proteins: practical and theoretical aspects.

R. Riek, Beat Vögeli, Dominik Leitz, 2010, Journal of magnetic resonance.

Exact distances and internal dynamics of perdeuterated ubiquitin from NOE buildups.

R. Riek, W. V. van Gunsteren, Beat Vögeli, 2009, Journal of the American Chemical Society.

eNORA2 Exact NOE Analysis Program.

Roland Riek, Beat Vögeli, Dean Strotz, 2017, Journal of chemical theory and computation.

Protein backbone motions viewed by intraresidue and sequential HN–Hα residual dipolar couplings

A. Bax, L. Yao, Beat Vögeli, 2008, Journal of biomolecular NMR.

The Exact NOE as an Alternative in Ensemble Structure Determination.

R. Riek, P. Güntert, Beat Vögeli, 2016, Biophysical journal.

PBRM1 bromodomains associate with RNA to facilitate chromatin association

Morkos A. Henen, Beat Vögeli, C. Musselman, 2023, Nucleic acids research.

PBRM1 BD2 and BD4 associate with RNA to facilitate chromatin association

Morkos A. Henen, Beat Vögeli, C. Musselman, 2022, bioRxiv.

The disordered Spindly C-terminus interacts with RZZ subunits ROD-1 and ZWL-1 in the kinetochore through the same sites in C. elegans.

Morkos A. Henen, Beat Vögeli, Parker J. Nichols, 2021, Journal of molecular biology.

Recognition of non-CpG repeats in Alu and ribosomal RNAs by the Z-RNA binding domain of ADAR1 induces A-Z junctions

Morkos A. Henen, J. Kieft, Beat Vögeli, 2021, Nature Communications.

Z-RNA biology: a central role in the innate immune response?

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2023, RNA.

Structure and dynamics conspire in the evolution of affinity between intrinsically disordered proteins

R. Riek, P. Güntert, Beat Vögeli, 2018, Science Advances.

Microbiota-derived butyrate is an endogenous HIF prolyl hydroxylase inhibitor

Morkos A. Henen, Beat Vögeli, S. Colgan, 2021, Gut microbes.

Microbial‐derived indoles inhibit neutrophil myeloperoxidase to diminish bystander tissue damage

Morkos A. Henen, Beat Vögeli, S. Colgan, 2021, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

Proteolytic Activation of Human-specific Olduvai Domains by the Furin Protease

J. Sikela, Beat Vögeli, T. Nemkov, 2021, bioRxiv.

Solution NMR backbone assignment reveals interaction-free tumbling of human lineage-specific Olduvai protein domains

Morkos A. Henen, J. Sikela, Beat Vögeli, 2019, Biomolecular NMR Assignments.

Beat Vögeli, D. Ostrovsky, C. McKnight, 2018, Journal of Biomolecular NMR.

Solution NMR Studies of Recombinant Aβ(1–42): From the Presence of a Micellar Entity to Residual β‐Sheet Structure in the Soluble Species

R. Riek, Beat Vögeli, S. Campioni, 2015, Chembiochem : a European journal of chemical biology.

Slow methyl axes motions in perdeuterated villin headpiece subdomain probed by cross-correlated NMR relaxation measurements.

Beat Vögeli, D. Ostrovsky, C. McKnight, 2023, Magnetochemistry.

SAM1 domain of SASH1 harbors distinctive structural heterogeneity.

Morkos A. Henen, Beat Vögeli, Y. Shellman, 2022, Journal of structural biology.

Atomic resolution protein allostery from the multi-state structure of a PDZ domain

R. Riek, P. Güntert, Beat Vögeli, 2021, bioRxiv.

Protein Motional Details Revealed by Complementary Structural Biology Techniques.

Lars V. Schäfer, Petra Rovó, Beat Vögeli, 2020, Structure.

Deuteration of nonexchangeable protons on proteins affects their thermal stability, side‐chain dynamics, and hydrophobicity

C. Mant, R. Hodges, Beat Vögeli, 2020, Protein science : a publication of the Protein Society.

Distance-independent Cross-correlated Relaxation and Isotropic Chemical Shift Modulation in Protein Dynamics Studies.

Beat Vögeli, L. Vugmeyster, 2018, Chemphyschem : a European journal of chemical physics and physical chemistry.

Beat Vögeli, Beat Vögeli, 2017, Journal of Biomolecular NMR.

Direct Investigation of Slow Correlated Dynamics in Proteins via Dipolar Interactions.

C. Schwieters, Beat Vögeli, R. B. Fenwick, 2016, Journal of the American Chemical Society.

Towards a true protein movie: a perspective on the potential impact of the ensemble-based structure determination using exact NOEs.

R. Riek, P. Güntert, Beat Vögeli, 2014, Journal of magnetic resonance.

Comprehensive description of NMR cross-correlated relaxation under anisotropic molecular tumbling and correlated local dynamics on all time scales.

Beat Vögeli, Beat Vögeli, 2010, The Journal of chemical physics.

Side chain: backbone projections in aromatic and ASX residues from NMR cross-correlated relaxation

R. Riek, Beat Vögeli, 2010, Journal of biomolecular NMR.

L. Yao, Beat Vögeli, 2009, Journal of the American Chemical Society.

The Inherent Dynamics and Interaction Sites of the SARS-CoV-2 Nucleocapsid N-Terminal Region

Morkos A. Henen, E. Eisenmesser, J. Redzic, 2021, Journal of Molecular Biology.

Differential Structural Features of Two Mutant ADAR1p150 Zα Domains Cause Aicardi-Goutières Syndrome.

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2023, Journal of molecular biology.

Reducing the measurement time of exact NOEs by non-uniform sampling

Morkos A. Henen, Beat Vögeli, F. Delaglio, 2020, Journal of Biomolecular NMR.

The Exact Nuclear Overhauser Enhancement: Recent Advances

Peter Güntert, Simon Olsson, Morkos A. Henen, 2017, Molecules.

A Structural Ensemble for the Enzyme Cyclophilin Reveals an Orchestrated Mode of Action at Atomic Resolution.

Peter Güntert, Roland Riek, Beat Vögeli, 2015, Angewandte Chemie.

Enzyme Selectivity Fine‐Tuned through Dynamic Control of a Loop

Beat Vögeli, Celestine N. Chi, Stefan Bibow, 2016, Angewandte Chemie.

A transient helix in the disordered region of dynein light intermediate chain links the motor to structurally diverse adaptors for cargo transport

Morkos A. Henen, R. Gassmann, Beat Vögeli, 2019, PLoS biology.

Activity and Affinity of Pin1 Variants

Morkos A. Henen, Beat Vögeli, Alexandra Born, 2019, Molecules.

Protein Allostery at Atomic Resolution

R. Riek, P. Güntert, Beat Vögeli, 2020, Angewandte Chemie.

Backbone and side-chain chemical shift assignments of full-length, apo, human Pin1, a phosphoprotein regulator with interdomain allostery

Jeffrey W. Peng, Morkos A. Henen, Beat Vögeli, 2018, Biomolecular NMR assignments.

Efficient Stereospecific Hβ2/3 NMR Assignment Strategy for Mid-Size Proteins

Morkos A. Henen, Beat Vögeli, Parker J. Nichols, 2018, Magnetochemistry.

The Dynamic Basis for Signal Propagation in Human Pin1-WW.

Andrea Cavalli, Simon Olsson, Roland Riek, 2016, Structure.

The experimental accuracy of the uni-directional exact NOE.

Beat Vögeli, J. Orts, D. Strotz, 2015, Journal of magnetic resonance.

Multiple-state ensemble structure determination from eNOE spectroscopy

R. Riek, P. Güntert, Beat Vögeli, 2013 .

An enzymatic molten globule: efficient coupling of folding and catalysis.

Donald Hilvert, Konstantin Pervushin, Peter Kast, 2004, Proceedings of the National Academy of Sciences of the United States of America.

The Structural Dynamics, Complexity of Interactions, and Functions in Cancer of Multi-SAM Containing Proteins

Morkos A. Henen, Beat Vögeli, Y. Shellman, 2023, Cancers.

Solution NMR backbone assignment of the SASH1 SLy proteins associated disordered region (SPIDER)

Morkos A. Henen, Beat Vögeli, Y. Shellman, 2023, Biomolecular NMR Assignments.

13C-detected HN(CA)C and HMCMC experiments using a single methyl-reprotonated sample for unambiguous methyl resonance assignment

G. Clore, Beat Vögeli, K. Hu, 2006, Journal of biomolecular NMR.

Intermolecular detergent-membrane protein noes for the characterization of the dynamics of membrane protein-detergent complexes.

R. Riek, Beat Vögeli, J. Lorieau, 2014, The journal of physical chemistry. B.

TROSY experiment for refinement of backbone ψ and φ by simultaneous measurements of cross-correlated relaxation rates and 3,4JHαHN coupling constants

Beat Vögeli, K. Pervushin, 2002 .

Full relaxation matrix analysis of apparent cross-correlated relaxation rates in four-spin systems.

Beat Vögeli, 2013, Journal of magnetic resonance.

Relaxation Matrix Analysis of Spin Diffusion for the NMR Structure Calculation with eNOEs.

R. Riek, Beat Vögeli, J. Orts, 2012, Journal of chemical theory and computation.

Extending the eNOE data set of large proteins by evaluation of NOEs with unresolved diagonals

R. Riek, Beat Vögeli, Celestine N. Chi, 2015, Journal of biomolecular NMR.

Beat Vögeli, D. Ostrovsky, C. McKnight, 2018, Journal of Biomolecular NMR.

Solution NMR Backbone Assignment of the C-Terminal Region of Human Dynein Light Intermediate Chain 2 (LIC2-C) Unveils Structural Resemblance with Its Homologue LIC1-C

Morkos A. Henen, Beat Vögeli, R. Prekeris, 2023, Magnetochemistry.

Simultaneous 1H- or 2H-, 15N- and multiple-band-selective 13C-decoupling during acquisition in 13C-detected experiments with proteins and oligonucleotides

Konstantin Pervushin, Beat Vögeli, Beat Vögeli, 2005, Journal of biomolecular NMR.

Solution NMR backbone assignments of the N-terminal Zα-linker-Zβ segment from Homo sapiens ADAR1p150

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2021, Biomolecular NMR Assignments.

Special Issue: A, B and Z: The Structure, Function and Genetics of Z-DNA and Z-RNA

Beat Vögeli, K. Vasquez, Q. Vicens, 2021, International journal of molecular sciences.

SASH1 interacts with TNKS2 and promotes human melanocyte stem cell maintenance

Jennifer D. Hintzsche, Morkos A. Henen, Beat Vögeli, 2023, bioRxiv.

Compiled data set of exact NOE distance limits, residual dipolar couplings and scalar couplings for the protein GB3

Simon Olsson, Peter Güntert, Roland Riek, 2015, Data in brief.

NMR determination of amide N-H equilibrium bond length from concerted dipolar coupling measurements.

A. Bax, L. Yao, Jinfa Ying, 2008, Journal of the American Chemical Society.

Simultaneous NMR study of protein structure and dynamics using conservative mutagenesis.

Ad Bax, Lishan Yao, Beat Vögeli, 2008, The journal of physical chemistry. B.

Side-chain H and C resonance assignment in protonated/partially deuterated proteins using an improved 3D(13)C-detected HCC-TOCSY.

Konstantin Pervushin, Beat Vögeli, Beat Vögeli, 2005, Journal of magnetic resonance.

Measuring 1H-1H and 1H-13C RDCs in methyl groups: example of pulse sequences with numerically optimized coherence transfer schemes.

Tim N. Heinz, P. Hünenberger, Beat Vögeli, 2005, Journal of magnetic resonance.

Spin-state selective carbon-detected HNCO with TROSY optimization in all dimensions and double echo-antiecho sensitivity enhancement in both indirect dimensions.

G Marius Clore, Beat Vögeli, Beat Vögeli, 2007, Journal of the American Chemical Society.

Detection of C′,Cα correlations in proteins using a new time- and sensitivity-optimal experiment

Beat Vögeli, K. Pervushin, Donghan Lee, 2005, Journal of biomolecular NMR.

Spatial elucidation of motion in proteins by ensemble-based structure calculation using exact NOEs

R. Riek, P. Güntert, Beat Vögeli, 2012, Nature Structural &Molecular Biology.

How uniform is the peptide plane geometry? A high-accuracy NMR study of dipolar Cα–C′/HN–N cross-correlated relaxation

Beat Vögeli, 2011, Journal of biomolecular NMR.

Measurements of side-chain 13C-13C residual dipolar couplings in uniformly deuterated proteins.

Beat Vögeli, K. Pervushin, H. Kovacs, 2004, Journal of the American Chemical Society.

Observation of individual transitions in magnetically equivalent spin systems.

Beat Vögeli, K. Pervushin, 2003, Journal of the American Chemical Society.

The nuclear Overhauser effect from a quantitative perspective.

Beat Vögeli, 2014, Progress in nuclear magnetic resonance spectroscopy.

Exact distance measurements for structure and dynamics in solid proteins by fast-magic-angle-spinning NMR.

C. Rienstra, Beat Vögeli, S. Vasa, 2019, Chemical communications.

NOE-Derived Methyl Distances from a 360 kDa Proteasome Complex.

R. Riek, Beat Vögeli, Celestine N. Chi, 2018, Chemistry.

Molecular Dynamics Simulations, Exact NOE Measurements, and Machine Learning Reveal a Low-populated State of the UUCG RNA Tetraloop

Sandro Bottaro, K. Lindorff-Larsen, Beat Vögeli, 2019 .

Zα Domain of ADAR1 Binds to an A-Form-like Nucleic Acid Duplex with Low Micromolar Affinity.

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2024, Biochemistry.

Z-Form Adoption of Nucleic Acid is a Multi-Step Process Which Proceeds through a Melted Intermediate.

Morkos A. Henen, Beat Vögeli, Q. Vicens, 2023, Journal of the American Chemical Society.

SASH1 S519N variant links skin hyperpigmentation and premature hair graying to dysfunction of melanocyte lineage.

Jennifer D. Hintzsche, Morkos A. Henen, Beat Vögeli, 2024, The Journal of investigative dermatology.