D. Kiga

发表

M. Hagiya, S. Yokoyama, K. Sakamoto, 1999, Bio Systems.

Tunable synthetic phenotypic diversification on Waddington’s landscape through autonomous signaling

M. Yamamura, M. Hagiya, M. Takinoue, 2011, Proceedings of the National Academy of Sciences.

Comparison between Effects of Retroactivity and Resource Competition upon Change in Downstream Reporter Genes of Synthetic Genetic Circuits

M. Yamamura, D. Kiga, Shotaro Ayukawa, 2019, Life.

General applicability of synthetic gene-overexpression for cell-type ratio control via reprogramming.

Masayuki Yamamura, Daisuke Kiga, Ryoji Sekine, 2014, ACS synthetic biology.

Project-Based Learning of Computer Programming Using an Artificial Market System

Isao Ono, Hajime Kita, Takao Terano, 2008 .

An aptazyme-based molecular device that converts a small-molecule input into an RNA output.

D. Kiga, Shotaro Ayukawa, Y. Sakai, 2012, Chemical communications.

Tunability of the ratio of cell states after the synthetic diversification by the diversity generator

M. Yamamura, M. Hagiya, D. Kiga, 2012, Communicative & integrative biology.

Multiple amino acid-excluded genetic codes for protein engineering using multiple sets of tRNA variants.

D. Kiga, Kazuaki Amikura, Y. Sakai, 2014, ACS synthetic biology.

A Highly Bioactive Lys-Deficient IFN Leads to a Site-Specific Di-PEGylated IFN with Equivalent Bioactivity to That of Unmodified IFN-α2b.

M. Yamamura, D. Kiga, Shotaro Ayukawa, 2018, ACS synthetic biology.

Synthetic Biology and Dual Use

D. Kiga, 2013 .

Robust estimation of bacterial cell count from optical density

John P. Marken, C. Workman, J. Beal, 2019, bioRxiv.

Site-speci ® c incorporation of an unnatural amino acid into proteins in mammalian cells

Kazuki Saito, S. Yokoyama, K. Sakamoto, 2022 .

An engineered Escherichia coli tyrosyl–tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system

Daisuke Kiga, Yoko Harada, Takanori Kigawa, 2002, Proceedings of the National Academy of Sciences of the United States of America.

An RNA aptamer to the xanthine/guanine base with a distinctive mode of purine recognition.

D Kiga, S. Yokoyama, K. Sakamoto, 1998, Nucleic acids research.

Simplification of the genetic code: restricted diversity of genetically encoded amino acids

Daisuke Kiga, Takanori Kigawa, Shigeyuki Yokoyama, 2012, Nucleic acids research.

RNA World

D. Kiga, Shotaro Ayukawa, Toshihiko Enomoto, 2019, Astrobiology.

Constraint-based perturbation analysis with cluster Newton method: a case study of personalized parameter estimations with irinotecan whole-body physiologically based pharmacokinetic model

Akihiko Konagaya, Daisuke Kiga, Shun Asami, 2017, BMC Systems Biology.

Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells.

S. Yokoyama, K. Sakamoto, D. Kiga, 2002, Nucleic acids research.

Experimental Evolution of a Green Fluorescent Protein Composed of 19 Unique Amino Acids without Tryptophan

D. Kiga, Kazuaki Amikura, Mitsuhiro Hitotsuyanagi, 2014, Origins of Life and Evolution of Biospheres.

High-frequency Noise Attenuation of a Two-component System Responding to Short-pulse Input

Masayuki Yamamura, Daisuke Kiga, Ryoji Sekine, 2016, CSBio.

Construction of a genetic AND gate under a new standard for assembly of genetic parts

Satoshi Murata, Masami Hagiya, Masayuki Yamamura, 2010, BMC Genomics.

Escherichia coli expression, purification, and refolding of human folate receptor α (hFRα) and β (hFRβ).

M. Yamamura, Roopa Dharmatti, Yoshihiro Ito, 2018, Protein expression and purification.

Shifted positioning of the anticodon nucleotide residues of amber suppressor tRNA species by Escherichia coli arginyl-tRNA synthetase.

S. Yokoyama, K. Sakamoto, D. Kiga, 2001, European journal of biochemistry.

Translation of ‘rare’ Codons in a Cell-free Protein Synthesis System from Escherichia coli

T. Kigawa, S. Yokoyama, K. Sakamoto, 2006, Journal of Structural and Functional Genomics.

Two site genetic incorporation of varying length polyethylene glycol into the backbone of one peptide.

M. Yamamura, Yoshihiro Ito, D. Kiga, 2015, Chemical communications.

Horizontal transfer of code fragments between protocells can explain the origins of the genetic code without vertical descent

Jorge I. Campos, N. Virgo, D. Kiga, 2018, Scientific Reports.

Development of an expression-tunable multiple protein synthesis system in cell-free reactions using T7-promoter-variant series

D. Kiga, H. Nishida, Naoko Senda, 2022, Synthetic biology.

Enhancement of Binding Affinity of Folate to Its Receptor by Peptide Conjugation

M. Yamamura, Roopa Dharmatti, Yoshihiro Ito, 2019, International journal of molecular sciences.

Cation-pi interaction in the polyolefin cyclization cascade uncovered by incorporating unnatural amino acids into the catalytic sites of squalene cyclase.

S. Yokoyama, K. Sakamoto, D. Kiga, 2006, Journal of the American Chemical Society.

Cultivation of Synthetic Biology with the iGEM Competition

Daisuke Kiga, Shotaro Ayukawa, Trevor Y. H. Ho, 2013, J. Adv. Comput. Intell. Intell. Informatics.

Design strategy for an initial state-independent diversity generator

M. Yamamura, D. Kiga, Ryoji Sekine, 2012 .

Robust estimation of bacterial cell count from optical density

Farren J. Isaacs, Marjolein E. Crooijmans, Dong Ju Kim, 2020, Communications Biology.

Towards parallel evaluation and learning of Boolean μ-formulas with molecules

Masami Hagiya, Masanori Arita, Kensaku Sakamoto, 1997, DNA Based Computers.

The long journey towards standards for engineering biosystems

Manuel Porcar, Víctor de Lorenzo, Jacob Beal, 2020, EMBO reports.

Synthetic Biology

Masayuki Yamamura, Daisuke Kiga, M. Yamamura, 2008, New Generation Computing.

Automated Dynamic Cellular Analysis in Time-Lapse Microscopy

H. Nagahashi, D. Kiga, Zicong Zhang, 2016 .

A Bacterial Continuous Culture System Based on a Microfluidic Droplet Open Reactor

M. Takinoue, D. Kiga, Shotaro Ayukawa, 2016, Analytical Sciences.

Molecular computation by DNA hairpin formation.

K Sakamoto, H Gouzu, K Komiya, 2000, Science.

RTRACS: a modularized RNA-dependent RNA transcription system with high programmability.

Masahiro Takinoue, Daisuke Kiga, Shotaro Ayukawa, 2011, Accounts of chemical research.

RNA Oscillator: Limit Cycle Oscillations based on Artificial Biomolecular Reactions

Akira Suyama, Masahiro Takinoue, Daisuke Kiga, 2009, New Generation Computing.

Experiments and simulation models of a basic computation element of an autonomous molecular computing system.

Akira Suyama, Masahiro Takinoue, Daisuke Kiga, 2008, Physical review. E, Statistical, nonlinear, and soft matter physics.

An observation method for autonomous signaling-mediated synthetic diversification in Escherichia coli.

D. Kiga, Ryoji Sekine, Shotaro Ayukawa, 2014, Methods in molecular biology.

The number of amino acids in a genetic code

Kazuaki Amikura, Daisuke Kiga, D. Kiga, 2013 .

Design and Numerical Analysis of RNA Oscillator

Akira Suyama, Masahiro Takinoue, Daisuke Kiga, 2007, IWNC.

Effects of downstream genes on synthetic genetic circuits

Masayuki Yamamura, Daisuke Kiga, Takefumi Moriya, 2014, BMC Systems Biology.

A design and feasibility study of reactions comprising DNA molecular machine that walks autonomously by using a restriction enzyme

Masayuki Yamamura, Daisuke Kiga, Hiroyuki Sekiguchi, 2008, Natural Computing.

Comparative analysis of three studies measuring fluorescence from engineered bacterial genetic constructs

John P. Marken, C. Workman, J. Beal, 2021, PloS one.

In vitro selection of a photoresponsive peptide aptamer to glutathione-immobilized microbeads.

M. Yamamura, Masuki Kawamoto, Yoshihiro Ito, 2015, Journal of bioscience and bioengineering.