T. Lingren

发表

Developing an Algorithm to Detect Early Childhood Obesity in Two Tertiary Pediatric Medical Centers

Jonathan P. Bickel, Marc S. Williams, I. Kohane, 2016, Applied Clinical Informatics.

Evaluating the impact of pre-annotation on annotation speed and potential bias: natural language processing gold standard development for clinical named entity recognition in clinical trial announcements

Louise Deléger, Todd Lingren, Katalin Molnár, 2013, J. Am. Medical Informatics Assoc..

Electronic Health Record Based Algorithm to Identify Patients with Autism Spectrum Disorder

Finale Doshi-Velez, Pei Chen, Joseph Bochenek, 2016, PloS one.

Leveraging Food and Drug Administration Adverse Event Reports for the Automated Monitoring of Electronic Health Records in a Pediatric Hospital

I. Solti, Yizhao Ni, T. Lingren, 2017, Biomedical informatics insights.

Developing and evaluating an automated appendicitis risk stratification algorithm for pediatric patients in the emergency department

I. Solti, Louise Deléger, T. Lingren, 2013, Journal of the American Medical Informatics Association : JAMIA.

Developing and evaluating a machine learning based algorithm to predict the need of pediatric intensive care unit transfer for newly hospitalized children.

Yizhao Ni, Todd Lingren, Haijun Zhai, 2014, Resuscitation.

Data Challenges With Real-Time Safety Event Detection And Clinical Decision Support (Preprint)

Yizhao Ni, T. Lingren, K. Melton, 2018 .

A GWAS Study on Liver Function Test Using eMERGE Network Participants

Keith Marsolo, Marylyn D. Ritchie, Shefali S. Verma, 2015, PloS one.

Detecting Adverse Events in Clinical Trial Free Text

T. Lingren, 2013 .

GWAS and enrichment analyses of non-alcoholic fatty liver disease identify new trait-associated genes and pathways across eMERGE Network

John J. Connolly, Marc S. Williams, H. Hakonarson, 2019, BMC Medicine.

EMR-linked GWAS study: investigation of variation landscape of loci for body mass index in children

Keith Marsolo, Isaac S. Kohane, Todd Lingren, 2013, Front. Genet..

The power of genetic diversity in genome-wide association studies of lipids

Christopher D. Brown, Aaron F. McDaid, M. P. Concas, 2021, Nature.

Identification of Four Novel Loci in Asthma in European American and African American Populations

Peggy L. Peissig, Jennifer A. Pacheco, Iftikhar J. Kullo, 2017, American journal of respiratory and critical care medicine.

Large-scale evaluation of automated clinical note de-identification and its impact on information extraction

Keith Marsolo, Fei Xia, Guergana K. Savova, 2013, J. Am. Medical Informatics Assoc..

Phenome-wide association study (PheWAS) in EMR-linked pediatric cohorts, genetically links PLCL1 to speech language development and IL5-IL13 to Eosinophilic Esophagitis

Keith Marsolo, Marylyn D. Ritchie, Aleksey A. Porollo, 2014, Front. Genet..

Harmonizing Clinical Sequencing and Interpretation for the eMERGE III Network.

Robert C. Green, Keith Marsolo, Casey Overby Taylor, 2019, American journal of human genetics.

Implicating genes, pleiotropy and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis

Anurag, Cassandra N. Spracklen, I. Ntalla, 2021, medRxiv.

A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids

Christopher D. Brown, Aaron F. McDaid, Yan V. Sun, 2021, bioRxiv.

Evaluation of the MC4R gene across eMERGE network identifies many unreported obesity-associated variants

Marc S. Williams, H. Hakonarson, J. Denny, 2020, International Journal of Obesity.

Automated detection of medication administration errors in neonatal intensive care

Eric S. Kirkendall, Yizhao Ni, Todd Lingren, 2015, J. Biomed. Informatics.

PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability

Paul A. Harris, Gerard Tromp, Joshua C. Denny, 2016, J. Am. Medical Informatics Assoc..

Decentralized and reproducible geocoding and characterization of community and environmental exposures for multisite studies

Patrick B. Ryan, Todd Lingren, Cole Brokamp, 2017, J. Am. Medical Informatics Assoc..

Desiderata for computable representations of electronic health records-driven phenotype algorithms

Paul A. Harris, Gerard Tromp, Jie Xu, 2015, J. Am. Medical Informatics Assoc..

Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care

Eric S. Kirkendall, Yizhao Ni, Todd Lingren, 2014, Journal of the American Medical Informatics Association : JAMIA.

Suboptimal Clinical Documentation in Young Children with Severe Obesity at Tertiary Care Centers

Todd Lingren, Jonathan P. Bickel, Isaac S Kohane, 2016, International journal of pediatrics.

Web 2.0-Based Crowdsourcing for High-Quality Gold Standard Development in Clinical Natural Language Processing

Todd Lingren, Haijun Zhai, Megan Kaiser, 2013, Journal of medical Internet research.

Electronic medical records as a replacement for prospective research data collection in postoperative pain and opioid response studies

Keith Marsolo, Xue Zhang, Todd Lingren, 2018, Int. J. Medical Informatics.

Designing and evaluating an automated system for real-time medication administration error detection in a neonatal intensive care unit

Eric S. Kirkendall, Yizhao Ni, Todd Lingren, 2018, AMIA.

Integrating and Evaluating the Data Quality and Utility of Smart Pump Information in Detecting Medication Administration Errors: Evaluation Study

Yizhao Ni, Todd Lingren, Eric Kirkendall, 2020, JMIR medical informatics.

Integrating and Evaluating the Data Quality and Utility of Smart Pump Information in Detecting Medication Administration Errors: Evaluation Study (Preprint)

Yizhao Ni, T. Lingren, Kristen Timmons, 2020 .

An end-to-end hybrid algorithm for automated medication discrepancy detection

Yizhao Ni, Todd Lingren, Megan Kaiser, 2015, BMC Medical Informatics and Decision Making.

Diagnosis Code and Health Care Utilization Patterns Associated With Diagnostic Uncertainty.

Philip A Hagedorn, T. Lingren, M. Fenchel, 2022, Hospital pediatrics.

Facilitating phenotype transfer using a common data model

George Hripcsak, Chunhua Weng, Joshua C. Denny, 2019, J. Biomed. Informatics.

Building Gold Standard Corpora for Medical Natural Language Processing Tasks

Keith Marsolo, Louise Deléger, Michal Kouril, 2012, AMIA.

Evaluation of the portability of computable phenotypes with natural language processing in the eMERGE network

Agnes S. Sundaresan, Justin H. Gundelach, Nephi A. Walton, 2023, Scientific Reports.

Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network

Joshua C. Denny, Chunhua Weng, Wei-Qi Wei, 2019, J. Biomed. Informatics.

Data Challenges With Real-Time Safety Event Detection And Clinical Decision Support

Eric S. Kirkendall, Yizhao Ni, Todd Lingren, 2019, Journal of medical Internet research.

Mining FDA drug labels for medical conditions

K. Bretonnel Cohen, Louise Deléger, Anil G. Jegga, 2013, BMC Medical Informatics and Decision Making.

Increasing the efficiency of trial-patient matching: automated clinical trial eligibility Pre-screening for pediatric oncology patients

Louise Deléger, Isaac S. Kohane, Yizhao Ni, 2015, BMC Medical Informatics and Decision Making.

A sequence labeling approach to link medications and their attributes in clinical notes and clinical trial announcements for information extraction

Louise Deléger, Todd Lingren, Haijun Zhai, 2012, J. Am. Medical Informatics Assoc..

Preparing an annotated gold standard corpus to share with extramural investigators for de-identification research

Keith Marsolo, Louise Deléger, Michal Kouril, 2014, J. Biomed. Informatics.

A multi-layer functional genomic analysis to understand noncoding genetic variation in lipids.

Christopher D. Brown, Aaron F. McDaid, M. P. Concas, 2022, American journal of human genetics.

Automated clinical trial eligibility prescreening: increasing the efficiency of patient identification for clinical trials in the emergency department

Judith W. Dexheimer, Yizhao Ni, Todd Lingren, 2014, J. Am. Medical Informatics Assoc..

Implicating genes, pleiotropy, and sexual dimorphism at blood lipid loci through multi-ancestry meta-analysis

I. Ntalla, M. Kanai, I. Olafsson, 2022, Genome Biology.

Pre-annotating Clinical Notes and Clinical Trial Announcements for Gold Standard Corpus Development: Evaluating the Impact on Annotation Speed and Potential Bias

Louise Deléger, Todd Lingren, Katalin Molnár, 2012, 2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology.

Phenotyping for patient safety: algorithm development for electronic health record based automated adverse event and medical error detection in neonatal intensive care

I. Solti, Yizhao Ni, T. Lingren, 2014, J. Am. Medical Informatics Assoc..