C. Livi

发表

Comparison of computational methods for Hi-C data analysis

S. Bicciato, Koustav Pal, F. Ferrari, 2017, Nature Methods.

Advances in the characterization of RNA‐binding proteins

C. Livi, G. Tartaglia, N. S. de Groot, 2016, Wiley interdisciplinary reviews. RNA.

A Computational Approach for the Discovery of Protein-RNA Networks.

C. Livi, G. Tartaglia, Domenica Marchese, 2016, Methods in molecular biology.

Protein-specific prediction of mRNA binding using RNA sequences, binding motifs and predicted secondary structures

Enrico Blanzieri, Carmen Maria Livi, E. Blanzieri, 2014, BMC Bioinformatics.

Comparison of computational methods for the analysis of HiC data

S. Bicciato, Koustav Pal, M. Forcato, 2017 .

Structural and Dynamical Heterogeneity in Ecological Networks

F. Jordán, C. Livi, P. Lecca, 2012 .

Identifying key species in ecosystems with stochastic sensitivity analysis

Paola Lecca, Ferenc Jordán, Carmen Maria Livi, 2011 .

Discovering the 3′ UTR-mediated regulation of alpha-synuclein

E. Tolosa, F. Valldeoriola, J. A. Rodriguez, 2017, Nucleic acids research.

cc SOL omics : a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli

D. Cirillo, C. Livi, G. Tartaglia, 2014 .

Protein-dependent prediction of messenger RNA binding using Support Vector Machines

C. Livi, 2013 .

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions

C. Livi, G. Tartaglia, Petr Klus, 2015, Bioinformatics.

VCF features to train SVM in grapevine SNP detection

Enrico Blanzieri, Claudio Moser, Patrice This, 2013 .

Hydroxymethylation profile of cell-free DNA is a biomarker for early colorectal cancer

Albert J. Vilella, Casper K Lumby, Jordan M. Eizenga, 2021, Scientific Reports.

Constitutive patterns of gene expression regulated by RNA-binding proteins

Carmen Maria Livi, Federico Agostini, Davide Cirillo, 2014, Genome Biology.

A ChIC solution for ChIP-seq quality assessment

Carmen Maria Livi, Ilario Tagliaferri, Koustav Pal, 2020, bioRxiv.

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions

Carmen Maria Livi, Petr Klus, Gian Gaetano Tartaglia, 2016, Bioinform..

Protein aggregation, structural disorder and RNA-binding ability: a new approach for physico-chemical and gene ontology classification of multiple datasets

C. Livi, G. Tartaglia, R. D. Ponti, 2015, BMC Genomics.

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions

C. Livi, G. Tartaglia, R. D. Ponti, 2016, Bioinform..

Discovery of protein-RNA networks.

Carmen Maria Livi, Federico Agostini, Davide Cirillo, 2014, Molecular bioSystems.

Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein

Carmen Maria Livi, Federico Agostini, Davide Cirillo, 2013, Nucleic acids research.

Protein-specific prediction of mRNA binding using RNA sequences, binding motifs and predicted secondary structures

E. Blanzieri, C. Livi, 2014, BMC Bioinformatics.

ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli

Carmen Maria Livi, Federico Agostini, Davide Cirillo, 2014, Bioinform..

Dynamical effects of weak trophic interactions in a stochastic food web simulation

Ferenc Jordán, Marco Scotti, Nerta Gjata, 2012 .

Protein aggregation, structural disorder and RNA-binding ability: a new approach for physico-chemical and gene ontology classification of multiple datasets

C. Livi, G. Tartaglia, R. D. Ponti, 2015, BMC Genomics.

HiCBricks: building blocks for efficient handling of large Hi-C datasets

Ilario Tagliaferri, Koustav Pal, Francesco Ferrari, 2019, Bioinform..

Discovery of protein-RNA networks.

D. Cirillo, C. Livi, G. Tartaglia, 2014, Molecular Biosystems.

Identifying key species in ecosystems with stochastic sensitivity analysis

F. Jordán, C. Livi, P. Lecca, 2011 .

A Computational Approach for the Discovery of Protein-RNA Networks.

C. Livi, G. Tartaglia, Domenica Marchese, 2016, Methods in molecular biology.