Degui Zhi

发表

A novel method for multiple alignment of sequences with repeated and shuffled elements.

Benjamin J. Raphael, P. Pevzner, Haixu Tang, 2004, Genome research.

Identification of highly specific localized sequence motifs in human ribosomal protein gene promoters.

Stefan Roepcke, M. Vingron, Degui Zhi, 2006, Gene.

A novel method for multiple alignment of sequences with repeated and shuffled elements.

Benjamin J. Raphael, P. Pevzner, Haixu Tang, 2004, Genome research.

Haplotype Threading Using the Positional Burrows-Wheeler Transform

Degui Zhi, Ahsan Sanaullah, Shaoije Zhang, 2022, WABI.

Sequence correlation between neighboring Alu instances suggests post-retrotransposition sequence exchange due to Alu gene conversion.

Degui Zhi, 2007, Gene.

Method Identifying repeat domains in large genomes

Benjamin J. Raphael, P. Pevzner, A. Price, 2006 .

Identifying repeat domains in large genomes

Benjamin J Raphael, Benjamin J. Raphael, Haixu Tang, 2006, Genome Biology.

Representing and comparing protein structures as paths in three-dimensional space

Pavel A. Pevzner, Adam Godzik, Degui Zhi, 2006, BMC Bioinformatics.

Detecting transcription of ribosomal protein pseudogenes in diverse human tissues from RNA-seq data

Peter D. Tonner, D. Zhi, Degui Zhi, 2012, BMC Genomics.

Syllable-PBWT for space-efficient haplotype long-match query

Degui Zhi, Shaojie Zhang, A. Naseri, 2022, bioRxiv.

iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching

Xiaoqian Jiang, Lucila Ohno-Machado, Lei Wang, 2020, BMC Medical Genomics.

Efficient Haplotype Block Matching in Bi-Directional PBWT

Shaojie Zhang, Ardalan Naseri, William Yue, 2021, WABI.

Alignment-free local structural search by writhe decomposition

Steven E. Brenner, Degui Zhi, Maxim Shatsky, 2007, WABI.

AliWABA: alignment on the web through an A-Bruijn approach

Benjamin J. Raphael, Neil C. Jones, Degui Zhi, 2006, Nucleic Acids Res..