R. Godoy-Ruiz

发表

Structure of the STRA6 receptor for retinol uptake

David J Weber, J. Frank, W. Hendrickson, 2016, Science.

The effect of charge-introduction mutations on E. coli thioredoxin stability.

R. Godoy-Ruiz, J. M. Sanchez-Ruiz, B. Ibarra-Molero, 2005, Biophysical chemistry.

The efficiency of different salts to screen charge interactions in proteins: a Hofmeister effect?

R. Godoy-Ruiz, J. M. Sanchez-Ruiz, B. Ibarra-Molero, 2004, Biophysical journal.

Relation between protein stability, evolution and structure, as probed by carboxylic acid mutations.

R. Godoy-Ruiz, J. M. Sanchez-Ruiz, B. Ibarra-Molero, 2004, Journal of molecular biology.

A simple tool to explore the distance distribution of correlated mutations in proteins.

R. Godoy-Ruiz, J. M. Sanchez-Ruiz, B. Ibarra-Molero, 2006, Biophysical chemistry.

The Importance of Therapeutically Targeting the Binary Toxin from Clostridioides difficile

R. Godoy-Ruiz, K. Adipietro, Kristen M Varney, 2021, International journal of molecular sciences.

Structure of the cell-binding component of the Clostridium difficile binary toxin reveals a di-heptamer macromolecular assembly

A. Grishaev, D. Beckett, A. MacKerell, 2020, Proceedings of the National Academy of Sciences.

Simultaneous measurement of 1H–15N and Methyl 1Hm–13Cm residual dipolar couplings in large proteins

V. Tugarinov, R. Godoy-Ruiz, Xinli Liao, 2011, Journal of biomolecular NMR.

1HN, 13C, and 15N resonance assignments of the Clostridioides difficile receptor binding domain 2 (CDTb, residues 757–876)

David J Weber, R. Godoy-Ruiz, M. E. Cook, 2020, Biomolecular NMR Assignments.

Kröhnke pyridines: Rapid and facile access to Mcl-1 inhibitors.

R. Godoy-Ruiz, P. Wilder, S. Fletcher, 2018, Bioorganic & medicinal chemistry letters.

Structure-Based Discovery of a Novel Pentamidine-Related Inhibitor of the Calcium-Binding Protein S100B.

Alexander D. MacKerell, David J Weber, R. Godoy-Ruiz, 2012, ACS medicinal chemistry letters.

Small G Proteins Rac1 and Ras Regulate Serine/Threonine Protein Phosphatase 5 (PP5)·Extracellular Signal-Regulated Kinase (ERK) Complexes Involved in the Feedback Regulation of Raf1*

David J Weber, R. Godoy-Ruiz, B. Wadzinski, 2013, The Journal of Biological Chemistry.

Physiologically relevant free Ca2+ ion concentrations regulate STRA6-calmodulin complex formation via the BP2 region of STRA6.

F. Mancia, O. Clarke, R. Godoy-Ruiz, 2021, Journal of molecular biology.

Structure of the STRA6 receptor for retinol uptake

David J Weber, J. Frank, W. Hendrickson, 2016, Science.

Alanine methyl groups as NMR probes of molecular structure and dynamics in high-molecular-weight proteins.

V. Tugarinov, R. Godoy-Ruiz, Chenyun Guo, 2010, Journal of the American Chemical Society.

Engineering proteins with tunable thermodynamic and kinetic stabilities

David Rodriguez-Larrea, R. Godoy-Ruiz, M. M. Garcia-Mira, 2008, Proteins.

Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation.

R. Godoy-Ruiz, J. Sancho, M. M. Garcia-Mira, 2004, Journal of molecular biology.

Mutational Studies on Resurrected Ancestral Proteins Reveal Conservation of Site-Specific Amino Acid Preferences throughout Evolutionary History

R. Godoy-Ruiz, J. M. Sanchez-Ruiz, E. Gaucher, 2014, Molecular biology and evolution.

Sulforaphane covalently interacts with the transglutaminase 2 cancer maintenance protein to alter its structure and suppress its activity

David J Weber, J. Lakowicz, H. Szmacinski, 2021, Molecular carcinogenesis.

Solution NMR evidence for symmetry in functionally or crystallographically asymmetric homodimers.

V. Tugarinov, R. Godoy-Ruiz, D. Gallagher, 2011, Journal of the American Chemical Society.

Engineering subtilisin proteases that specifically degrade active RAS

Eun Jung Choi, David J Weber, Yanan He, 2021, Communications biology.

Engineering subtilisin proteases that specifically degrade active RAS

Eun Jung Choi, David J Weber, Yanan He, 2021, Communications Biology.

Engineering protein-specific proteases: targeting active RAS

Eun Jung Choi, David J Weber, Yanan He, 2020, bioRxiv.

Using multi-objective computational design to extend protein promiscuity.

A. Jaramillo, David Rodriguez-Larrea, R. Godoy-Ruiz, 2010, Biophysical chemistry.

Protein Folding Cooperativity and Thermodynamic Barriers of the Simplest β-Sheet Fold: A Survey of WW Domains.

V. Muñoz, Jose C. Martínez, R. Godoy-Ruiz, 2018, The journal of physical chemistry. B.

Expanding the realm of ultrafast protein folding: gpW, a midsize natural single-domain with alpha+beta topology that folds downhill.

V. Muñoz, R. Godoy-Ruiz, J. M. Sanchez-Ruiz, 2008, Journal of the American Chemical Society.

Transamidase site-targeted agents alter the conformation of the transglutaminase cancer stem cell survival protein to reduce GTP binding activity and cancer stem cell survival

David J Weber, J. Lakowicz, C. Kerr, 2016, Oncogene.

Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.

David Rodriguez-Larrea, R. Godoy-Ruiz, J. M. Sanchez-Ruiz, 2006, Journal of molecular biology.

Dendritic Cell‐Mediated Cross‐Priming by a Bispecific Neutralizing Antibody Boosts Cytotoxic T Cell Responses and Protects Mice against SARS‐CoV‐2

R. Godoy-Ruiz, K. Adipietro, L. Álvarez-Vallina, 2023, Advanced science.