R. A. Melnyk

发表

Deep Annotation of Protein Function across Diverse Bacteria from Mutant Phenotypes

Kelly M. Wetmore, Jacob S. Lamson, Benjamin E. Rubin, 2016 .

Filling gaps in bacterial amino acid biosynthesis pathways with high-throughput genetics

A. Arkin, A. Deutschbauer, M. Price, 2017, bioRxiv.

Diverse Bacterial Genes Modulate Plant Root Association by Beneficial Bacteria

A. Arkin, A. Deutschbauer, G. Stacey, 2020, mBio.

A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated Pseudomonas Required to Evade Plant Defenses

Cara H. Haney, R. A. Melnyk, Jenifer Bush, 2018, mBio.

Rhizosphere‐associated Pseudomonas induce systemic resistance to herbivores at the cost of susceptibility to bacterial pathogens

F. Ausubel, N. Pierce, Cara H. Haney, 2018, Molecular ecology.

Commensal Pseudomonas fluorescens protect Arabidopsis from closely-related Pseudomonas pathogens in a colonization-dependent manner

Cara H. Haney, R. A. Melnyk, Myoung-Hwan Chi, 2021, bioRxiv.

Convergent gain and loss of genomic islands drive lifestyle changes in plant-associated Pseudomonas

Cara H. Haney, R. A. Melnyk, Sarzana S. Hossain, 2019, The ISME Journal.

Convergent gain and loss of genomic islands drives lifestyle changes in plant-associated bacteria

Cara H. Haney, R. A. Melnyk, Sarzana S. Hossain, 2018, bioRxiv.

Structure and Evolution of Chlorate Reduction Composite Transposons

R. A. Melnyk, J. Coates, I. Clark, 2013, mBio.

Toward a Mechanistic Understanding of Anaerobic Nitrate-Dependent Iron Oxidation: Balancing Electron Uptake and Detoxification

R. A. Melnyk, J. Coates, H. Carlson, 2011, Front. Microbio..

Bacterial genomics of plant adaptation

Cara H. Haney, R. A. Melnyk, 2017, Nature Genetics.

Commensal Pseudomonas fluorescens Strains Protect Arabidopsis from Closely Related Pseudomonas Pathogens in a Colonization-Dependent Manner

Cara H. Haney, R. A. Melnyk, K. Craven, 2022, mBio.

Physiological and Genetic Description of Dissimilatory Perchlorate Reduction by the Novel Marine Bacterium Arcobacter sp. Strain CAB

R. A. Melnyk, J. Coates, Charlotte I. Carlström, 2013, mBio.

Comparative Genomics Identified a Genetic Locus in Plant-Associated Pseudomonas spp. That Is Necessary for Induced Systemic Susceptibility

Yang Liu, Cara H. Haney, R. A. Melnyk, 2019, mBio.

Chlorate reduction in Shewanella algae ACDC is a recently acquired metabolism characterized by gene loss, suboptimal regulation and oxidative stress

R. A. Melnyk, J. Coates, P. Novichkov, 2014, Molecular microbiology.

Identification of a Perchlorate Reduction Genomic Island with Novel Regulatory and Metabolic Genes

R. A. Melnyk, J. Coates, H. Carlson, 2011, Applied and Environmental Microbiology.

Deep Annotation of Protein Function across Diverse Bacteria from 11 Mutant Phenotypes 12 13

Kelly M. Wetmore, Jacob S. Lamson, Benjamin E. Rubin, 2016 .

Gastric acid and escape to systemic circulation represent major bottlenecks to host infection by Citrobacter rodentium

Cara H. Haney, R. A. Melnyk, B. B. Finlay, 2022, The ISME journal.

Synthetic and Evolutionary Construction of a Chlorate-Reducing Shewanella oneidensis MR-1

R. A. Melnyk, J. Coates, H. Carlson, 2015, mBio.

Molybdenum Availability Is Key to Nitrate Removal in Contaminated Groundwater Environments

Adam P. Arkin, Romy Chakraborty, Terry C. Hazen, 2015, Applied and Environmental Microbiology.

Mutant phenotypes for thousands of bacterial genes of unknown function

Adam P. Arkin, Axel Visel, Romy Chakraborty, 2018, Nature.

The Perchlorate Reduction Genomic Island: Mechanisms and Pathways of Evolution by Horizontal Gene Transfer

R. A. Melnyk, J. Coates, 2015, BMC Genomics.

Novel Mechanism for Scavenging of Hypochlorite Involving a Periplasmic Methionine-Rich Peptide and Methionine Sulfoxide Reductase

Adam P. Arkin, Morgan N. Price, John D. Coates, 2015, mBio.

Evidence for Direct Electron Transfer by a Gram-Positive Bacterium Isolated from a Microbial Fuel Cell

J. C. Thrash, M. Auer, R. A. Melnyk, 2011, Applied and Environmental Microbiology.

A Genome-Wide Screen Identifies Genes in Rhizosphere-Associated Pseudomonas Required to Evade Plant Defenses

R. A. Melnyk, Jenifer Bush, Zhexian Liu, 2018 .

MamO Is a Repurposed Serine Protease that Promotes Magnetite Biomineralization through Direct Transition Metal Binding in Magnetotactic Bacteria

J. Hurley, R. A. Melnyk, A. Komeili, 2016, PLoS biology.

Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria

Manfred Auer, Richard A Mathies, Boon Siang Yeo, 2012, Proceedings of the National Academy of Sciences.

Accentuate the Positive: Dissimilatory Iron Reduction by Gram-Positive Bacteria

R. A. Melnyk, K. Wrighton, J. Coates, 2011 .

Transposon and Deletion Mutagenesis of Genes Involved in Perchlorate Reduction in Azospira suillum PS

R. A. Melnyk, J. Coates, I. Clark, 2013, mBio.

Composite Transposons Structure and Evolution of Chlorate Reduction 2013

R. A. Melnyk, I. Clark, Anna E. Engelbrektson, 2013 .

Bacterial genomics of plant adaptation

Cara H. Haney, R. A. Melnyk, 2017, Nature Genetics.

Title MamO Is a Repurposed Serine Protease that Promotes Magnetite Biomineralization through Direct Transition Metal Binding in Magnetotactic Bacteria Permalink

J. Hurley, R. A. Melnyk, A. Komeili, 2016 .

Functional Redundancy in Perchlorate and Nitrate Electron Transport Chains and Rewiring Respiratory Pathways to Alter Terminal Electron Acceptor Preference

R. A. Melnyk, J. Coates, H. Carlson, 2018, Front. Microbiol..

Convergent gain and loss of genomic islands drive lifestyle changes in plant-associated Pseudomonas

Cara H. Haney, R. A. Melnyk, Sarzana S. Hossain, 2019, The ISME Journal.

Mutant phenotypes for thousands of bacterial genes of unknown function

Kelly M. Wetmore, Jacob S. Lamson, Benjamin E. Rubin, 2018, Nature.

Rhizosphere‐associated Pseudomonas induce systemic resistance to herbivores at the cost of susceptibility to bacterial pathogens

F. Ausubel, N. Pierce, Cara H. Haney, 2018, Molecular ecology.