J. Aramini

发表

Computational design of a protein-based enzyme inhibitor.

D. Baker, G. Montelione, S. Fleishman, 2013, Journal of molecular biology.

NMR Structure Determination for Larger Proteins Using Backbone-Only Data

Oliver F. Lange, Thomas Szyperski, Alexander Eletsky, 2010, Science.

Structures of influenza A proteins and insights into antiviral drug targets

James M Aramini, Eddy Arnold, Li-Chung Ma, 2010, Nature Structural &Molecular Biology.

Solution NMR structure of the NlpC/P60 domain of lipoprotein Spr from Escherichia coli: structural evidence for a novel cysteine peptidase catalytic triad.

Jessica Y Locke, B. Rost, G. Montelione, 2008, Biochemistry.

Robotic cloning and Protein Production Platform of the Northeast Structural Genomics Consortium.

Mark Gerstein, Daphne Macapagal, Gaetano T Montelione, 2005, Methods in enzymology.

Consistent blind protein structure generation from NMR chemical shift data

Oliver F. Lange, D. Baker, Gaohua Liu, 2008, Proceedings of the National Academy of Sciences.

Ligand modulation of sidechain dynamics in a wild-type human GPCR

Michael V. LeVine, K. Gardner, S. Rasmussen, 2017, eLife.

Quantum chemical 13Cα chemical shift calculations for protein NMR structure determination, refinement, and validation

H. Scheraga, G. Montelione, L. Tong, 2008, Proceedings of the National Academy of Sciences.

The RAS-Binding Domain of Human BRAF Protein Serine/Threonine Kinase Exhibits Allosteric Conformational Changes upon Binding HRAS.

G. Montelione, T. Acton, S. Vorobiev, 2015, Structure.

Automated protein fold determination using a minimal NMR constraint strategy

Gaetano T Montelione, Deyou Zheng, Hunter N B Moseley, 2003, Protein science : a publication of the Protein Society.

Construct optimization for protein NMR structure analysis using amide hydrogen/deuterium exchange mass spectrometry

G. Montelione, T. Acton, R. Xiao, 2009, Proteins.

Dynamics in Natural and Designed Elastins and Their Relation to Elastic Fiber Structure and Recoil

R. Koder, J. Aramini, J. Preston, 2020, bioRxiv.

Disordered N-terminal Region Dimeric in Its Disulfide-reduced State , with 2-associated Protein 1 ( CDK 2 AP 1 ) Is Human Cyclin-dependent Kinase Protein Structure and Folding :

G. Montelione, J. Prestegard, R. Xiao, 2012 .

Solution NMR structure of the BRCT domain from Thermus thermophilus DNA ligase

G. Montelione, Aneerban Bhattacharya, J. Aramini, 2006 .

Characterization of Antimicrobial and Host-Defense Peptides by NMR Spectroscopy

H. Vogel, J. Aramini, Zhihong Liu, 2017 .

The Stereochemical Course of Pd-Catalyzed Suzuki Reactions Using Primary Alkyltrifluoroborate Nucleophiles.

Hsin Wang, J. Aramini, B. Murray, 2021, ACS catalysis.

STRUCTURAL, DYNAMIC, AND ENZYMATIC PROPERTIES OF MIXED α/β-OLIGONUCLEOTIDES CONTAINING POLARITY REVERSALS

J. Van De Sande, J. Aramini, M. Germann, 2001 .

Conformational dynamics in mixed α/β-oligonucleotides containing polarity reversals: A molecular dynamics study using time-averaged restraints*

N. Ulyanov, J. Aramini, M. Germann, 2000 .

Spectroscopic studies of the interaction of aluminum( III) with transferrins

H. Vogel, J. Aramini, J. A. Saponja, 1996 .

Structural basis for suppression of a host antiviral response by influenza A virus

G. Montelione, R. Krug, E. Arnold, 2008, Proceedings of the National Academy of Sciences.

Structural elucidation of the Cys‐His‐Glu‐Asn proteolytic relay in the secreted CHAP domain enzyme from the human pathogen Staphylococcus saprophyticus

James M Aramini, Gaetano T Montelione, Markus Fischer, 2009, Proteins.

Unbiased Discovery of Dynamic Peptide‐ATP Complexes

J. Aramini, R. Ulijn, T. Tuttle, 2019, ChemSystemsChem.

NMR and X-RAY structures of human E2-like ubiquitin-fold modifier conjugating enzyme 1 (UFC1) reveal structural and functional conservation in the metazoan UFM1-UBA5-UFC1 ubiquination pathway

B. Rost, Gaohua Liu, G. Montelione, 2009, Journal of Structural and Functional Genomics.

Quadrupolar metal ion NMR studies of metalloproteins.

H. Vogel, J. Aramini, 1998 .

Combinatorial Discovery and Validation of Heptapeptides with UTP Binding Induced Structure

J. Aramini, R. Ulijn, T. Tuttle, 2020, ChemSystemsChem.

Microgram-scale protein structure determination by NMR

G. Montelione, C. Anklin, R. Xiao, 2007, Nature Methods.

Calcium-43 NMR studies of calcium-binding lysozymes and alpha-lactalbumins.

H. Vogel, J. Aramini, T. Drakenberg, 1992, Biochemistry.

Reactions of salicylaldehydes with alkyl cyanoacetates on the surface of solid catalysts: syntheses of 4H-chromene derivatives

J. Aramini, Ziwei Huang, M. Germann, 2000 .

Intrinsic disorder controls two functionally distinct dimers of the master transcription factor PU.1

J. Aramini, Suela Xhani, G. Poon, 2020, Science Advances.

A comparison of trimethylphosphine and tricyclohexylphosphine complexes (η5-C5Me5)Re(CO)(PR3(N2 (R = Me, cyclo-C6H11) in inter- and intra-molecular C-H activation reactions. X-ray structure of the cyclometallated product (η5-C5Me5)Re(η2-C6H10P{C6H11}2)(H)(CO) · 0.5C6H14

J. Aramini, F. Einstein, Richard H. Jones, 1990 .

Structures of apo- and ssDNA-bound YdbC from Lactococcus lactis uncover the function of protein domain family DUF2128 and expand the single-stranded DNA-binding domain proteome

G. Montelione, T. Acton, R. Xiao, 2013, Nucleic acids research.

Human Cyclin-dependent Kinase 2-associated Protein 1 (CDK2AP1) Is Dimeric in Its Disulfide-reduced State, with Natively Disordered N-terminal Region*

G. Montelione, J. Prestegard, R. Xiao, 2012, The Journal of Biological Chemistry.

Solution NMR structure of Escherichia coli ytfP expands the structural coverage of the UPF0131 protein domain family

B. Rost, G. Montelione, Jinfeng Liu, 2007, Proteins.

Cadmium-113 NMR studies of bovine and human alpha-lactalbumin and equine lysozyme.

H. Vogel, J. Aramini, K. Nitta, 1995, Journal of biochemistry.

Thallium-205 and carbon-13 NMR studies of human sero- and chicken ovotransferrin.

H. Vogel, J. Aramini, P. Krygsman, 1994, Biochemistry.

Use of High Pressure NMR Spectroscopy to Rapidly Identify Proteins with Internal Ligand-Binding Voids

K. Gardner, J. Aramini, D. Gagné, 2020, bioRxiv.

Quadrupolar metal ion NMR studies of metalloproteins.

H. Vogel, J. Aramini, 1998, Biochemistry and cell biology = Biochimie et biologie cellulaire.

Solution NMR structure of Alr2454 from Nostoc sp. PCC 7120, the first structural representative of Pfam domain family PF11267

G. Montelione, D. Petrey, T. Acton, 2012, Journal of Structural and Functional Genomics.

1H, 13C, and 15N Resonance Assignments for Escherichia coli ytfP, a Member of the Broadly Conserved UPF0131 Protein Domain Family

G. Montelione, T. Acton, R. Xiao, 2005, Journal of biomolecular NMR.

GFT NMR based resonance assignment for the 21 kDa human protein UFC1

Gaohua Liu, G. Montelione, T. Szyperski, 2005, Journal of Biomolecular NMR.

Altering murine leukemia virus integration through disruption of the integrase and BET protein family interaction

F. Bushman, G. Montelione, Nirav Malani, 2014, Nucleic acids research.

PDBStat: a universal restraint converter and restraint analysis software package for protein NMR

David A. Snyder, G. Montelione, J. Aramini, 2013, Journal of Biomolecular NMR.

The X-ray crystal structure of bis(pentafluorophenyl)tellurium difluoride

J. Aramini, F. Einstein, R. Sharma, 1987 .

Dynamics in Natural and Designed Elastins and Their Relation to Elastic Fiber Structure and Recoil

R. Koder, J. Aramini, J. Preston, 2020, bioRxiv.

Reactions of Salicylaldehydes with Alkyl Cyanoacetates on the Surface of Solid Catalysts: Syntheses of 4H‐Chromene Derivatives.

J. Aramini, Ziwei Huang, M. Germann, 2000 .

Chemical shift range of thioether-bridged face-sharing bioctahedral complexes : a tungsten-183 NMR study

H. Vogel, J. Aramini, H. Kraatz, 1993 .

A Second RNA-Binding Site in the NS1 Protein of Influenza B Virus.

G. Montelione, R. Krug, K. Hamilton, 2016, Structure.

A community resource of experimental data for NMR / X‐ray crystal structure pairs

Rong Xiao, Robert Powers, Thomas Szyperski, 2016, Protein science : a publication of the Protein Society.

PDBStat: a universal restraint converter and restraint analysis software package for protein NMR

James M Aramini, Binchen Mao, Gaetano T Montelione, 2013, Journal of biomolecular NMR.

Solution NMR structure of the ribosomal protein RP‐L35Ae from Pyrococcus furiosus

David A. Snyder, B. Rost, G. Montelione, 2012, Proteins.

Blind testing of routine, fully automated determination of protein structures from NMR data.

Harald Schwalbe, Bin Wu, David Baker, 2012, Structure.

Solution NMR structure of VF0530 from Vibrio fischeri reveals a nucleic acid‐binding function

G. Montelione, T. Acton, R. Xiao, 2011, Proteins.

Dimer Interface of the Effector Domain of Non-structural Protein 1 from Influenza A Virus

Gaetano T. Montelione, Li-Chung Ma, Rong Xiao, 2011, The Journal of Biological Chemistry.

Backbone and Ile-δ1, Leu, Val Methyl 1H, 13C and 15N NMR chemical shift assignments for human interferon-stimulated gene 15 protein

G. Montelione, R. Krug, J. Cort, 2011, Biomolecular NMR assignments.

Solution NMR structure of the plasmid‐encoded fimbriae regulatory protein PefI from Salmonella enterica serovar Typhimurium

G. Montelione, T. Acton, R. Xiao, 2011, Proteins.

of VF0530 from Vibrio fischeri reveals a nucleic acid-binding

G. Montelione, R. Xiao, T. Acton, 2011 .

Structural Basis of O6-Alkylguanine Recognition by a Bacterial Alkyltransferase-like DNA Repair Protein*

Mei Jiang, John A Tainer, Ta-Tsen Soong, 2010, The Journal of Biological Chemistry.

fimbriae regulatory protein PefI from Salmonella enterica serovar Typhimurium

G. Montelione, T. Acton, R. Xiao, 2010 .

SPINS: A laboratory information management system for organizing and archiving intermediate and final results from NMR protein structure determinations

James M Aramini, Gaetano T Montelione, Hunter N B Moseley, 2006, Proteins.

A generalized approach to automated NMR peak list editing: application to reduced dimensionality triple resonance spectra.

Thomas Szyperski, James M Aramini, Gaetano T Montelione, 2004, Journal of magnetic resonance.

Letter to the Editor: Backbone 1H, 15N and 13C assignments for the 21 kDa Caenorhabditis elegans homologue of `brain-specific' protein

Daniel Monleón, YiWen Chiang, James M. Aramini, 2004, Journal of Biomolecular NMR.

Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii

B. Rost, G. Montelione, B. Honig, 2003, Protein science : a publication of the Protein Society.

Letter to the Editor: Resonance assignments for the hypothetical protein yggU from Escherichia coli

Rong Xiao, Thomas Szyperski, James M Aramini, 2003, Journal of biomolecular NMR.

Synthesis and cis-trans isomerism of (pentamethylcyclopentadienyl)rhenium(III) halide complexes formed by oxidative addition of X2 or HX (X = chlorine, bromine, iodine) to (.eta.5-C5Me5)Re(CO)2(PMe3) or (.eta.5-C5Me5)Re(CO)(PMe3)(N2)

J. Aramini, R. Singer, A. Klahn-Oliva, 1989 .

Melanin-Inspired Chromophoric Microparticles Composed of Polymeric Peptide Pigments.

J. Aramini, R. Ulijn, A. Lampel, 2021, Angewandte Chemie.

Biophysical characterization of the complex between double-stranded RNA and the N-terminal domain of the NS1 protein from influenza A virus: evidence for a novel RNA-binding mode.

James M Aramini, Gaetano T Montelione, Rong Xiao, 2004, Biochemistry.

NMR studies of DNA duplexes containing alpha-anomeric nucleotides and polarity reversals

J. Aramini, M. Germann, 1998 .

DNA Duplexes Containing Alpha Anomeric Nucleotides and Polarity Reversals: Coexistence of Parallel and Antiparallel DNA

J. Aramini, R. Pon, B. Kalisch, 1997 .

(19)F NMR reveals multiple conformations at the dimer interface of the nonstructural protein 1 effector domain from influenza A virus.

G. Montelione, R. Krug, J. Ladbury, 2014, Structure.

Structure of a DNA duplex that contains alpha-anomeric nucleotides and 3'-3' and 5'-5' phosphodiester linkages: coexistence of parallel and antiparallel DNA.

J. Van De Sande, J. Aramini, R. Pon, 1996, Biochemistry.

Spectroscopic and thermodynamic studies of DNA duplexes containing alpha-anomeric C, A, and G nucleotides and polarity reversals: coexistence of localized parallel and antiparallel DNA.

J. Van De Sande, J. Aramini, M. Germann, 1997, Biochemistry.

Interaction of Calmodulin with Its Binding Domain of Rat Cerebellar Nitric Oxide Synthase

H. Vogel, J. Aramini, T. Yuan, 1995, The Journal of Biological Chemistry.

Aluminum-27 and carbon-13 NMR studies of aluminum(3+) binding to ovotransferrin and its half-molecules

H. Vogel, J. Aramini, 1993 .

Accurate Automated Protein NMR Structure Determination Using Unassigned NOESY Data

David Baker, Gaohua Liu, Binchen Mao, 2009, Journal of the American Chemical Society.

A microscale protein NMR sample screening pipeline

Gaetano T. Montelione, Thomas B. Acton, John K. Everett, 2009, Journal of biomolecular NMR.

Solution NMR structure of the SOS response protein YnzC from Bacillus subtilis

B. Rost, G. Montelione, M. Baran, 2008, Proteins.

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples

Oliver F. Lange, David Baker, James M Aramini, 2012, Proceedings of the National Academy of Sciences.

Solution NMR structure, backbone dynamics, and heme-binding properties of a novel cytochrome c maturation protein CcmE from Desulfovibrio vulgaris.

G. Montelione, A. Lemak, T. Acton, 2012, Biochemistry.

Comparisons of NMR spectral quality and success in crystallization demonstrate that NMR and X-ray crystallography are complementary methods for small protein structure determination.

James M Aramini, Gaetano T Montelione, David A Snyder, 2005, Journal of the American Chemical Society.

Recombinant expression, antimicrobial activity and mechanism of action of tritrpticin analogs containing fluoro-tryptophan residues.

H. Vogel, J. Aramini, M. Arias, 2016, Biochimica et biophysica acta.

Emerging antiviral targets for influenza A virus.

James M Aramini, R. Krug, J. Aramini, 2009, Trends in pharmacological sciences.

Structural basis for ubiquitin-like ISG 15 protein binding to the NS1 protein of influenza B virus: a protein-protein interaction function that is not shared by the corresponding N-terminal domain of the NS1 protein of influenza A virus.

G. Montelione, R. Krug, J. Aramini, 2002, Virology.

Solution structure of a DNA duplex containing an alpha-anomeric adenosine: insights into substrate recognition by endonuclease IV.

J. Aramini, R. Cunningham, R. Pon, 2004, Journal of molecular biology.

Volume and Compressibility Differences Between Protein Conformations Revealed by High-Pressure NMR.

K. Gardner, J. Aramini, D. Gagné, 2021, Biophysical journal.

High-Pressure NMR Reveals Volume and Compressibility Differences Between Two Stably Folded Protein Conformations

K. Gardner, J. Aramini, D. Gagné, 2020, bioRxiv.

The effects of temperature, viscosity, and molecular size on the aluminum-27 QCT NMR of transferrins.

H. Vogel, J. Aramini, 1996, Journal of magnetic resonance. Series B.

Gallium(3+) Binding to Ovotransferrin and Its Half-Molecules: A Multinuclear NMR Study

H. Vogel, J. Aramini, D. Mcintyre, 1994 .

QUADRUPOLAR METAL ION NMR STUDY OF OVOTRANSFERRIN AT 17.6 T

H. Vogel, J. Aramini, M. Germann, 1994 .

A Scandium-45 NMR Study of Ovotransferrin and Its Half-Molecules

H. Vogel, J. Aramini, 1994 .

Field-Dependent Aluminum-27 NMR Studies of the Transferrins: An Approach for the Study of Metal Ion Binding Sites in Larger Proteins

H. Vogel, J. Aramini, M. Germann, 1993 .

Unraveling the Mechanism of a LOV Domain Optogenetic Sensor: A Glutamine Lever Induces Unfolding of the Jα Helix

Jared E. Toettcher, K. Gardner, J. Toettcher, 2020, bioRxiv.

A metabolic perspective on CSF-mediated neurodegeneration in multiple sclerosis.

M. Inglese, V. Fossati, J. Aramini, 2019, Brain : a journal of neurology.

Evaluating the Impact of the Tyr158 pKa on the Mechanism and Inhibition of InhA, the Enoyl-ACP Reductase from Mycobacterium tuberculosis.

P. Tonge, J. Aramini, F. Daryaee, 2023, Biochemistry.

Validation of helical tilt angles in the solution NMR structure of the Z domain of Staphylococcal protein A by combined analysis of residual dipolar coupling and NOE data

James M Aramini, Gaetano T Montelione, Deyou Zheng, 2004, Protein science : a publication of the Protein Society.

Calcium Regulates S100A12 Zinc Sequestration by Limiting Structural Variations

J. Aramini, Aleksey Aleshintsev, Rupal Gupta, 2019, Chembiochem : a European journal of chemical biology.

NMR solution structures of [d(GCGAAT-3'-3'-alphaT-5'-5'-CGC)2] and its unmodified control.

J. Aramini, A. Mujeeb, M. Germann, 1998, Nucleic Acids Research.

Assessment of template‐based protein structure predictions in CASP10

James M Aramini, Yuanpeng J Huang, Binchen Mao, 2014, Proteins.

Solution Structures of Casein Peptides: NMR, FTIR, CD, and Molecular Modeling Studies of αs1-Casein, 1–23

E. M. Brown, P. Fox, J. Aramini, 2001, Journal of protein chemistry.

Less is more: A simple methyl-TROSY based pulse scheme offers improved sensitivity in applications to high molecular weight complexes.

L. Kay, J. Aramini, Nicolas Bolik-Coulon, 2022, Journal of magnetic resonance.

Lead-207 NMR: a novel probe for the study of calcium-binding proteins

H. Vogel, J. Aramini, T. Hiraoki, 1996, JBIC Journal of Biological Inorganic Chemistry.

Bioactive Peptide Design Based on Protein Surface Epitopes

Ute Koch, Jimin Gao, J. Aramini, 1997, The Journal of Biological Chemistry.

Solution structure of a DNA.RNA hybrid containing an alpha-anomeric thymidine and polarity reversals: d(ATGG-3'-3'-alphaT-5'-5'-GCTC). r(gagcaccau).

J. Aramini, M. Germann, 1999, Biochemistry.

A cyclic heptapeptide mimics CD4 domain 1 CC’ loop and inhibits CD4 biological function

J. Aramini, Jimin Gao, T. Satoh, 2002 .

Hydrolytic polymerization of rhodium(III). Characterization of various forms of a trinuclear aqua ion

H. Vogel, J. Aramini, L. Spiccia, 1997 .

NMR and stopped-flow studies of metal ion binding to alpha-lactalbumins.

H. Vogel, J. Aramini, E. Chiancone, 1996, Biochimica et biophysica acta.

Ligand modulation of sidechain dynamics in a wild-type human GPCR

Michael V. LeVine, K. Gardner, S. Rasmussen, 2017 .

Computational design of a protein-based enzyme inhibitor.

G. Montelione, S. Fleishman, J. Hunt, 2013, Journal of molecular biology.

Blind testing of routine, fully automated determination of protein structures from NMR data.

Oliver F. Lange, Gaohua Liu, G. Montelione, 2012, Structure.