S. Taylor

发表

Sasquatch: predicting the impact of regulatory SNPs on transcription factor binding from cell- and tissue-specific DNase footprints

J. Telenius, R. Schwessinger, J. Hughes, 2017, Genome research.

Multiplexed analysis of chromosome conformation at vastly improved sensitivity

J. Telenius, J. Hughes, S. McGowan, 2015, Nature Methods.

TNFα signals through specialized factories where responsive coding and miRNA genes are transcribed

Joshua D. Larkin, H. Aburatani, Y. Ruan, 2012, The EMBO journal.

Nutritional Stress Induced by Tryptophan-Degrading Enzymes Results in ATF4-Dependent Reprogramming of the Amino Acid Transporter Profile in Tumor Cells.

R. Strausberg, L. Olsen, V. Cerundolo, 2016, Cancer research.

Dynamic Analysis of Gene Expression and Genome-wide Transcription Factor Binding during Lineage Specification of Multipotent Progenitors

Carsten Peterson, Shamit Soneji, Göran Karlsson, 2013, Cell stem cell.

Genome-wide identification of TAL1's functional targets: insights into its mechanisms of action in primary erythroid cells.

Shamit Soneji, Stephen Taylor, Jim R Hughes, 2010, Genome research.

Reconstruction of the global neural crest gene regulatory network in vivo

J. Telenius, J. Hughes, S. Taylor, 2018, bioRxiv.

Cryptic splicing events in the iron transporter ABCB7 and other key target genes in SF3B1-mutant myelodysplastic syndromes

R. Kusec, M. Llorian, S. Taylor, 2016, Leukemia.

An integrated platform to systematically identify causal variants and genes for polygenic human traits

Calliope A. Dendrou, J. Todd, G. Lunter, 2019, bioRxiv.

Prioritizing genes of potential relevance to diseases affected by sex hormones: an example of Myasthenia Gravis

V. Bajic, Winston A Hide, O. Hofmann, 2008, BMC Genomics.

Interferon-induced transmembrane protein-3 rs12252-C is associated with rapid progression of acute HIV-1 infection in Chinese MSM cohort

A. McMichael, Ning Li, S. Taylor, 2015, AIDS.

CaptureCompendium: a comprehensive toolkit for 3C analysis

J. Telenius, R. Schwessinger, D. Downes, 2020, bioRxiv.

Erythroferrone inhibits the induction of hepcidin by BMP6.

S. Taylor, A. Brinth, E. Lavallie, 2018, Blood.

M1-like monocytes are a major immunological determinant of severity in previously healthy adults with life-threatening influenza

A. McMichael, V. Cerundolo, S. Taylor, 2017, JCI insight.

Synergistic silencing of α-globin and induction of γ-globin by histone deacetylase inhibitor, vorinostat as a potential therapy for β-thalassaemia

S. Taylor, D. Higgs, C. Fisher, 2019, Scientific Reports.

The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatin

R. Schwessinger, Matthew E. Gosden, D. Downes, 2022, Nature Communications.

CTAS: a CT score to quantify disease activity in pulmonary sarcoidosis

S. Taylor, E. Repapi, L. Ho, 2016, Thorax.

LanceOtron: a deep learning peak caller for genome sequencing experiments

D. Downes, J. Hughes, S. Taylor, 2022, Bioinform..

Selective silencing of α-globin by the histone demethylase inhibitor IOX 1 : a

U. Oppermann, S. Taylor, D. Higgs, 2017 .

Selective silencing of α-globin by the histone demethylase inhibitor IOX1: a potentially new pathway for treatment of β-thalassemia

U. Oppermann, S. Taylor, D. Higgs, 2017, Haematologica.

Defining genome architecture at base-pair resolution

R. Schwessinger, D. Downes, J. Hughes, 2021, Nature.

Human induced pluripotent stem cell-derived B lymphocytes express sIgM and can be generated via a hemogenic endothelium intermediate.

S. Taylor, L. Carpenter, S. Watt, 2015, Stem cells and development.

A molecular roadmap of definitive erythropoiesis from human induced pluripotent stem cells

S. Taylor, L. Carpenter, D. Roberts, 2017, British journal of haematology.

Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations.

A. Gavin, M. Cazzola, P. Vyas, 2018, Blood.

LanceOtron: a deep learning peak caller for ATAC-seq, ChIP-seq, and DNase-seq

D. Downes, J. Hughes, S. Taylor, 2021, bioRxiv.

High-resolution analysis of cis-acting regulatory networks at the α-globin locus

J. Ragoussis, I. Dunham, J. Hughes, 2013, Philosophical Transactions of the Royal Society B: Biological Sciences.

Multi-Modal Characterization of Monocytes in Idiopathic Pulmonary Fibrosis Reveals a Primed Type I Interferon Immune Phenotype

N. Ashley, C. Clelland, S. Taylor, 2021, Frontiers in Immunology.

Nuclear IGF1R Interacts with Regulatory Regions of Chromatin to Promote RNA Polymerase II Recruitment and Gene Expression Associated with Advanced Tumor Stage.

F. Hamdy, C. Verrill, S. Taylor, 2018, Cancer research.

Type-1 IFN primed monocytes in pathogenesis of idiopathic pulmonary fibrosis

N. Ashley, C. Clelland, S. Taylor, 2020, bioRxiv.

Generation of bivalent chromatin domains during cell fate decisions

P. Vyas, T. Enver, S. Jacobsen, 2011, Epigenetics & Chromatin.

M1-like monocytes are a major immunological determinant of severity in previously healthy adults with life-threatening influenza

A. McMichael, V. Cerundolo, S. Taylor, 2017, JCI insight.

SCL/TAL1 cooperates with Polycomb RYBP-PRC1 to suppress alternative lineages in blood-fated cells

P. Sopp, Supat Thongjuea, P. Vyas, 2018, Nature Communications.

Reconstruction of the Global Neural Crest Gene Regulatory Network In Vivo

J. Hughes, S. Taylor, T. Sauka-Spengler, 2019, Developmental cell.

SCL/TAL1 cooperates with Polycomb RYBP-PRC1 to suppress alternative lineages in blood-fated cells

P. Sopp, Supat Thongjuea, P. Vyas, 2018, Nature Communications.

Multi Locus View: an extensible web-based tool for the analysis of genomic data.

Gerton Lunter, Martin J Sergeant, Jim R Hughes, 2020, Communications Biology.

Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations.

A. Gavin, M. Cazzola, P. Vyas, 2018, Blood.

Prioritizing genes of potential relevance to diseases affected by sex hormones: an example of Myasthenia Gravis

V. Bajic, Winston A Hide, M. Kaur, 2008, BMC Genomics.