G. Michel

发表

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

Corinne Da Silva, Susana M. Coelho, J. Poulain, 2010, Nature.

Structures of Shikimate Dehydrogenase AroE and Its Paralog YdiB

Allan Matte, Miroslaw Cygler, Adrian J. Lapthorn, 2003, Journal of Biological Chemistry.

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

G. Michel, M. Czjzek, J. Hehemann, 2010, Nature.

Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses

G. Michel, D. Eveillard, P. Bordron, 2017, Front. Microbiol..

Regulation of alginate catabolism involves a GntR family repressor in the marine flavobacterium Zobellia galactanivorans DsijT

M. Dudek, G. Michel, F. Thomas, 2020, Nucleic acids research.

Identification of catalytic residues and mechanistic analysis of family GH82 iota-carrageenases.

G. Michel, M. Czjzek, T. Barbeyron, 2010, Biochemistry.

Evolution and diversity of plant cell walls: from algae to flowering plants.

B. Kloareg, G. Michel, D. Stengel, 2011, Annual review of plant biology.

The β-Glucanase ZgLamA from Zobellia galactanivorans Evolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin*

G. Michel, M. Czjzek, J. Hehemann, 2013, The Journal of Biological Chemistry.

Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications

G. Michel, D. Portetelle, M. Vandenbol, 2014, Applied Microbiology and Biotechnology.

Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans DsijT.

R. Amann, H. Teeling, A. Goesmann, 2016, Environmental microbiology.

Matching the Diversity of Sulfated Biomolecules: Creation of a Classification Database for Sulfatases Reflecting Their Substrate Specificity

M. Hoebeke, G. Michel, Christophe Caron, 2016, PloS one.

Genetic analyses unravel the crucial role of a horizontally acquired alginate lyase for brown algal biomass degradation by Zobellia galactanivorans

G. Michel, F. Thomas, M. McBride, 2017, Environmental microbiology.

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

Susana M. Coelho, J. Poulain, J. Weissenbach, 2013, Proceedings of the National Academy of Sciences.

Identification and Characterization of a Halotolerant, Cold-Active Marine Endo-β-1,4-Glucanase by Using Functional Metagenomics of Seaweed-Associated Microbiota

G. Michel, D. Portetelle, M. Vandenbol, 2014, Applied and Environmental Microbiology.

Genome and metabolic network of “Candidatus Phaeomarinobacter ectocarpi” Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae

Anne Siegel, Catherine Boyen, Simon M. Dittami, 2014, Front. Genet..

The κ-carrageenase of P. carrageenovora Features a Tunnel-Shaped Active Site

B. Henrissat, B. Kloareg, G. Michel, 2001 .

A single bacterial sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium

James A. London, P. Eyers, G. Michel, 2020, bioRxiv.

Chondrus crispus – A Present and Historical Model Organism for Red Seaweeds

T. Tonon, C. Boyen, J. Collén, 2014 .

Evolutionary Evidence of Algal Polysaccharide Degradation Acquisition by Pseudoalteromonas carrageenovora 9T to Adapt to Macroalgal Niches

D. Vallenet, G. Michel, T. Barbeyron, 2018, Front. Microbiol..

Degradation of lambda-carrageenan by Pseudoalteromonas carrageenovora lambda-carrageenase: a new family of glycoside hydrolases unrelated to kappa- and iota-carrageenases.

B. Kloareg, G. Michel, S. Colin, 2007, The Biochemical journal.

Microbiota Metagenomics of Seaweed-Associated-1 , 4-Glucanase by Using Functional β Halotolerant , Cold-Active Marine Endo-Identification and Characterization of a

G. Michel, D. Portetelle, M. Vandenbol, 2014 .

Functional screening of a metagenomic library of seaweed-associated 1 microbiota : identification and characterization of a halotolerant , cold-2 active marine endo-ß-1 , 4-endoglucanase 3 4

G. Michel, D. Portetelle, M. Vandenbol, 2014 .

A subfamily roadmap of the evolutionarily diverse glycoside hydrolase family 16 (GH16)

B. Henrissat, H. Brumer, G. Michel, 2019, The Journal of Biological Chemistry.

Systematic comparison of eight methods for preparation of high purity sulfated fucans extracted from the brown alga Pelvetia canaliculata.

G. Michel, H. Rogniaux, M. Fanuel, 2021, International journal of biological macromolecules.

Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)

Juying Yan, S. Shu, J. Grimwood, 2017, Proceedings of the National Academy of Sciences.

Cloning and biochemical characterization of the fucanase FcnA: definition of a novel glycoside hydrolase family specific for sulfated fucans.

B. Kloareg, G. Michel, N. Kervarec, 2006, Glycobiology.

Expression, purification, crystallization and preliminary x-ray analysis of the kappa-carrageenase from Pseudoalteromonas carrageenovora.

T. Vernet, B. Kloareg, G. Michel, 1999, Acta crystallographica. Section D, Biological crystallography.

Viral degradation of marine bacterial exopolysaccharides.

G. Michel, A. Baudoux, E. Bucciarelli, 2019, FEMS microbiology ecology.

A subfamily roadmap for functional glycogenomics of the evolutionarily diverse Glycoside Hydrolase Family 16 (GH16)

B. Henrissat, H. Brumer, G. Michel, 2019 .

Ten years of CAZypedia: a living encyclopedia of carbohydrate-active enzymes.

Spencer J. Williams, T. Pons, R. Pickersgill, 2018, Glycobiology.

Seasonal and algal diet-driven patterns of the digestive microbiota of the European abalone Haliotis tuberculata, a generalist marine herbivore

S. Dittami, C. Leblanc, G. Michel, 2018, Microbiome.

Innovating glycoside hydrolase activity on a same structural scaffold

G. Michel, M. Czjzek, 2017, Proceedings of the National Academy of Sciences.

iota-Carrageenases constitute a novel family of glycoside hydrolases, unrelated to that of kappa-carrageenases.

B. Henrissat, B. Kloareg, G. Michel, 2000, The Journal of biological chemistry.

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

Erich Bornberg-Bauer, Yves Van de Peer, Yao-Cheng Lin, 2016, Nature.

The Complete Genome Sequence of the Fish Pathogen Tenacibaculum maritimum Provides Insights into Virulence Mechanisms

G. Michel, Z. Rouy, T. Barbeyron, 2017, Front. Microbiol..

Connecting Algal Polysaccharide Degradation to Formaldehyde Detoxification

M. Lalk, U. Bornscheuer, T. Schweder, 2022, Chembiochem : a European journal of chemical biology.

Expression, purification, crystallization and preliminary X-ray analysis of the iota-carrageenase from Alteromonas fortis.

T. Vernet, B. Kloareg, G. Michel, 2000, Acta crystallographica. Section D, Biological crystallography.

Functional screening of a metagenomic library from algal biofilms.

G. Michel, M. Vandenbol, T. Barbeyron, 2013, Communications in agricultural and applied biological sciences.

Bromine is an endogenous component of a vanadium bromoperoxidase.

M. C. Feiters, F. Küpper, C. Leblanc, 2005, Journal of the American Chemical Society.

Vanadium haloperoxidases: From the discovery 30 years ago to X-ray crystallographic and V K-edge absorption spectroscopic studies

M. C. Feiters, L. Delage, C. Leblanc, 2015 .

Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research.

Susana M. Coelho, T. Tonon, J. Cock, 2007, The New phytologist.

The Vanadium Iodoperoxidase from the Marine Flavobacteriaceae Species Zobellia galactanivorans Reveals Novel Molecular and Evolutionary Features of Halide Specificity in the Vanadium Haloperoxidase Enzyme Family

L. Delage, C. Leblanc, G. Michel, 2014, Applied and Environmental Microbiology.

The Bacterial Vanadium Iodoperoxidase from the Marine Flavobacteriaceae Zobellia

L. Delage, C. Leblanc, G. Michel, 2014 .

The structure of the RlmB 23S rRNA methyltransferase reveals a new methyltransferase fold with a unique knot.

Allan Matte, Miroslaw Cygler, A. Matte, 2002, Structure.

A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan

U. Bornscheuer, T. Schweder, G. Michel, 2019, Nature Chemical Biology.

Discovering novel enzymes by functional screening of plurigenomic libraries from alga-associated Flavobacteriia and Gammaproteobacteria.

G. Michel, M. Vandenbol, T. Barbeyron, 2016, Microbiological research.

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes.

T. Tonon, J. Cock, D. Scornet, 2010, The New phytologist.

Chemical and enzymatic fractionation of cell walls from Fucales: insights into the structure of the extracellular matrix of brown algae.

T. Tonon, B. Kloareg, G. Michel, 2014, Annals of botany.

Structural Evidence for the Evolution of Xyloglucanase Activity from Xyloglucan Endo-Transglycosylases: Biological Implications for Cell Wall Metabolism[W]

H. Brumer, G. Michel, T. Teeri, 2007, The Plant Cell Online.

Environmental and Gut Bacteroidetes: The Food Connection

G. Michel, M. Czjzek, J. Hehemann, 2011, Front. Microbio..

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

C. Médigue, D. Vallenet, G. Michel, 2017, Nature Communications.

In silico and in vitro analysis of an Aspergillus niger chitin deacetylase to decipher its subsite sugar preferences

G. Michel, B. Moerschbacher, T. Roret, 2021, The Journal of biological chemistry.

Development of novel monoclonal antibodies against starch and ulvan - implications for antibody production against polysaccharides with limited immunogenicity

Maja G. Rydahl, G. Michel, B. Svensson, 2017, Scientific Reports.

Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes.

T. Tonon, J. Cock, D. Scornet, 2010, The New phytologist.

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

C. Médigue, D. Vallenet, G. Michel, 2017, Nature Communications.

Site-directed Mutagenesis of the Active Site Region in the Quinate/Shikimate 5-Dehydrogenase YdiB of Escherichia coli*

R. Ménard, A. Matte, H. Lindner, 2005, Journal of Biological Chemistry.

SulfAtlas, the sulfatase database: state of the art and new developments

M. Hoebeke, E. Corre, G. Michel, 2022, Nucleic acids research.

Role and Evolution of the Extracellular Matrix in the Acquisition of Complex Multicellularity in Eukaryotes: A Macroalgal Perspective

B. Kloareg, G. Michel, J. M. Cock, 2021, Genes.

The agar-specific hydrolase ZgAgaC from the marine bacterium Zobellia galactanivorans defines a new GH16 protein subfamily

G. Michel, H. Rogniaux, M. Czjzek, 2019, The Journal of Biological Chemistry.

Double blind microarray-based polysaccharide profiling enables parallel identification of uncharacterized polysaccharides and carbohydrate-binding proteins with unknown specificities

G. Michel, M. Czjzek, W. Willats, 2018, Scientific Reports.

Biochemical and structural investigation of two paralogous glycoside hydrolases from Zobellia galactanivorans: novel insights into the evolution, dimerization plasticity and catalytic mechanism of the GH117 family.

A. Groisillier, G. Michel, M. Czjzek, 2015, Acta crystallographica. Section D, Biological crystallography.

Characterization of the first alginolytic operons in a marine bacterium: from their emergence in marine Flavobacteriia to their independent transfers to marine Proteobacteria and human gut Bacteroides.

T. Tonon, G. Michel, M. Czjzek, 2012, Environmental microbiology.

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans*

G. Michel, M. Czjzek, J. Hehemann, 2012, The Journal of Biological Chemistry.

Discovery and structural characterization of a novel glycosidase family of marine origin.

A. Groisillier, G. Michel, M. Czjzek, 2011, Environmental microbiology.

Evaluation of reference genes for real-time quantitative PCR in the marine flavobacterium Zobellia galactanivorans.

G. Michel, T. Barbeyron, F. Thomas, 2011, Journal of microbiological methods.

MARINE-EXPRESS: taking advantage of high throughput cloning and expression strategies for the post-genomic analysis of marine organisms

D. Power, A. Groisillier, C. Boyen, 2010, Microbial cell factories.

Degradation of λ-carrageenan by Pseudoalteromonas carrageenovora λ-carrageenase: a new family of glycoside hydrolases unrelated to κ- and ι-carrageenases

B. Kloareg, G. Michel, S. Colin, 2007 .

The iota-carrageenase of Alteromonas fortis. A beta-helix fold-containing enzyme for the degradation of a highly polyanionic polysaccharide.

E. Fanchon, B. Henrissat, B. Kloareg, 2001, The Journal of biological chemistry.

The kappa-carrageenase of P. carrageenovora features a tunnel-shaped active site: a novel insight in the evolution of Clan-B glycoside hydrolases.

B. Henrissat, B. Kloareg, G. Michel, 2001, Structure.

ι-Carrageenases Constitute a Novel Family of Glycoside Hydrolases, Unrelated to That of κ-Carrageenases*

B. Henrissat, B. Kloareg, G. Michel, 2000, The Journal of Biological Chemistry.

Purification, Cloning, Characterization and Essential Amino Acid Residues Analysis of a New ι-Carrageenase from Cellulophaga sp. QY3

Lushan Wang, G. Michel, W. Chai, 2013, PloS one.

Bioconversion of red seaweed galactans: a focus on bacterial agarases and carrageenases

G. Michel, M. Czjzek, T. Barbeyron, 2006, Applied Microbiology and Biotechnology.

The structural bases of the processive degradation of iota-carrageenan, a main cell wall polysaccharide of red algae.

B. Kloareg, G. Michel, O. Dideberg, 2003, Journal of molecular biology.

The Cultivable Surface Microbiota of the Brown Alga Ascophyllum nodosum is Enriched in Macroalgal-Polysaccharide-Degrading Bacteria

G. Michel, D. Portetelle, M. Vandenbol, 2015, Front. Microbiol..

The Mannitol Utilization System of the Marine Bacterium Zobellia galactanivorans

A. Groisillier, T. Tonon, G. Michel, 2014, Applied and Environmental Microbiology.

Carrageenan-induced innate immune response is modified by enzymes that hydrolyze distinct galactosidic bonds.

Robert J Linhardt, S. Bhattacharyya, J. Tobacman, 2010, The Journal of nutritional biochemistry.

A -HELIX FOLD-CONTAINING ENZYME FOR THE DEGRADATION OF A HIGHLY POLYANIONIC

E. Fanchon, B. Henrissat, B. Kloareg, 2001 .

Seasonal and algal diet-driven patterns of the digestive microbiota of the European abalone Haliotis tuberculata, a generalist marine herbivore

S. Dittami, C. Leblanc, G. Michel, 2018, Microbiome.

Alterocin, an Antibiofilm Protein Secreted by Pseudoalteromonas sp. Strain 3J6

D. Vallenet, E. Corre, G. Michel, 2020, Applied and Environmental Microbiology.

Polysaccharide-degrading enzymes from marine bacteria

G. Michel, M. Czjzek, 2013 .

The Ectocarpus genome and brown algal genomics: the Ectocarpus Genome Consortium

Corinne Da Silva, Gildas Le Corguillé, Susana M. Coelho, 2012 .

A single sulfatase is required to access colonic mucin by a gut bacterium

James A. London, P. Eyers, G. Michel, 2021, Nature.

Mariniflexile fucanivorans sp. nov., a marine member of the Flavobacteriaceae that degrades sulphated fucans from brown algae.

G. Michel, M. Czjzek, S. L’Haridon, 2008, International journal of systematic and evolutionary microbiology.

Description of Maribacter forsetii sp. nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of the genus Maribacter.

R. Amann, G. Michel, S. L’Haridon, 2008, International journal of systematic and evolutionary microbiology.

The Structure of Chondroitin B Lyase Complexed with Glycosaminoglycan Oligosaccharides Unravels a Calcium-dependent Catalytic Machinery*

Robert J Linhardt, Traian Sulea, Rahul Raman, 2004, Journal of Biological Chemistry.

A. Groisillier, G. Michel, M. Czjzek, 2015, Acta crystallographica. Section D, Biological crystallography.

Analysis of nasturtium TmNXG1 complexes by crystallography and molecular dynamics provides detailed insight into substrate recognition by family GH16 xyloglucan endo‐transglycosylases and endo‐hydrolases

Pekka Mark, Fredrika Gullfot, Harry Brumer, 2009, Proteins.

Chlorophyll-binding proteins revisited - a multigenic family of light-harvesting and stress proteins from a brown algal perspective

T. Tonon, C. Boyen, J. Collén, 2010, BMC Evolutionary Biology.

The sulphated-galactan hydrolases, agarases and carrageenases : structural biology and molecular evolution

B. Kloareg, G. Michel, P. Potin, 2001 .

Comparative Characterization of Two Marine Alginate Lyases from Zobellia galactanivorans Reveals Distinct Modes of Action and Exquisite Adaptation to Their Natural Substrate*

G. Michel, M. Czjzek, T. Barbeyron, 2013, The Journal of Biological Chemistry.

The family 6 carbohydrate-binding modules have coevolved with their appended catalytic modules toward similar substrate specificity.

B. Kloareg, G. Michel, M. Czjzek, 2009, Glycobiology.

Expression, purification, crystallization and preliminary X-ray analysis of the polysaccharide lyase RB5312 from the marine planctomycete Rhodopirellula baltica.

G. Michel, M. Czjzek, M. Jam, 2008, Acta crystallographica. Section F, Structural biology and crystallization communications.

Alpha-Agarases Define a New Family of Glycoside Hydrolases, Distinct from Beta-Agarase Families

B. Kloareg, G. Michel, P. Potin, 2007, Applied and Environmental Microbiology.

Beta-Agarase Families Glycoside Hydrolases , Distinct from Alpha-Agarases Define a New Family of

B. Kloareg, G. Michel, P. Potin, 2007 .

Supporting Information Text

Frank Oliver Glöckner, Juan P. Albar, Manuel Ferrer, 2014 .

Mannitol-1-phosphate dehydrogenase activity in Ectocarpus siliculosus, a key role for mannitol synthesis in brown algae

A. Groisillier, T. Tonon, C. Boyen, 2011, Planta.

Vanadium-dependent iodoperoxidases in Laminaria digitata, a novel biochemical function diverging from brown algal bromoperoxidases

C. Leblanc, G. Michel, P. Potin, 2005, JBIC Journal of Biological Inorganic Chemistry.

Structural insights into marine carbohydrate degradation by family GH16 κ-carrageenases

G. Michel, M. Czjzek, C. Leroux, 2017, The Journal of Biological Chemistry.

The cell-wall active mannuronan C5-epimerases in the model brown alga Ectocarpus: From gene context to recombinant protein.

Susana M. Coelho, C. Boyen, G. Michel, 2016, Glycobiology.

Polysaccharide utilisation loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic.

R. Amann, H. Teeling, Sixing Huang, 2016, Environmental microbiology.

Unraveling the multivalent binding of a marine family 6 carbohydrate‐binding module with its native laminarin ligand

G. Michel, M. Czjzek, M. Jam, 2016, The FEBS journal.

Structural and biochemical characterization of the laminarinase ZgLamCGH16 from Zobellia galactanivorans suggests preferred recognition of branched laminarin.

G. Michel, M. Czjzek, V. Ferrières, 2015, Acta crystallographica. Section D, Biological crystallography.

The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours.

B. Kloareg, G. Michel, P. Potin, 2005, The Biochemical journal.

Mannitol metabolism in brown algae involves a new phosphatase family.

P. Bonin, A. Groisillier, T. Tonon, 2014, Journal of experimental botany.

Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria

U. Bornscheuer, T. Schweder, G. Michel, 2023, Applied Microbiology and Biotechnology.

Microscopic and molecular insights into heterogeneous phase degradation of agars and carrageenans by marine bacterial galactanases

G. Michel, P. Nyvall-collen, M. Czjzek, 2005 .

Alteromonas fortis sp. nov., a non-flagellated bacterium specialized in the degradation of iota-carrageenan, and emended description of the genus Alteromonas.

G. Michel, T. Barbeyron, E. Duchaud, 2019, International journal of systematic and evolutionary microbiology.

The laterally acquired GH5 ZgEngAGH5_4 from the marine bacterium Zobellia galactanivorans is dedicated to hemicellulose hydrolysis.

G. Michel, Damien Thompson, M. Czjzek, 2018, The Biochemical journal.

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

H. Teeling, Sixing Huang, F. Glöckner, 2014, Environmental microbiology.

Insoluble (1 → 3), (1 → 4)-β-D-glucan is a component of cell walls in brown algae (Phaeophyceae) and is masked by alginates in tissues

G. Michel, M. Czjzek, W. Willats, 2017, Scientific Reports.

Sweet and sour sugars from the sea: the biosynthesis and remodeling of sulfated cell wall polysaccharides from marine macroalgae

G. Michel, Cécile Hervé, E. Ficko-Blean, 2015 .

Structural analysis of nasturtium NXG reveals the evolution of GH16 xyloglucanase activity from XETs : biological implications for cell wall metabolism

H. Brumer, G. Michel, T. Teeri, 2007 .

Expression, purification and preliminary X-ray diffraction analysis of the catalytic module of a beta-agarase from the flavobacterium Zobellia galactanivorans.

G. Michel, M. Czjzek, J. Hehemann, 2010, Acta crystallographica. Section F, Structural biology and crystallization communications.

The Rhodoexplorer Platform for Red Algal Genomics and Whole-Genome Assemblies for Several Gracilaria Species

Susana M. Coelho, D. Scornet, E. Corre, 2023, bioRxiv.

Environmental and gut Bacteroidetes : the food connection

G. Michel, M. Czjzek, J. Hehemann, 2011 .